Ooceraea biroi (clonal raider ant): 105276707
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Entry
105276707 CDS
T05778
Name
(RefSeq) m7GpppX diphosphatase
KO
K12584
m7GpppX diphosphatase [EC:
3.6.1.59
]
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105276707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obo03019
]
105276707
Enzymes [BR:
obo01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.59 5'-(N7-methyl 5'-triphosphoguanosine)-[mRNA] diphosphatase
105276707
Messenger RNA biogenesis [BR:
obo03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
105276707
3'-5' decay
Other 3'-5' decay factors
105276707
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS_C
DcpS
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
105276707
NCBI-ProteinID:
XP_011332847
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All DBs
Position
6:complement(14135751..14137740)
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AA seq
359 aa
AA seq
DB search
MAEKYAIANDEQCPPTKRAKLDDKSLTENAKEENASTNANGKTPSENDDGGVHESELNLS
AFEVTRVLQNNCARKLICLEGKFEDREGPAVVLLEQKSFPYDNLVLKKNFFDEKTIFEKH
FTNDIYGNYDCFPSGRCNSLKATVVYPATQNHIDKYKKQQLHIIDETYELYEQVTLPHIE
STSFSLEWITNILEHKAEQESVIYEDPDKDTGFVLVIDYKWDKQPDTLKLLALPFQKIRS
LRELNGSHLPLLKNIRDAGTAAISKKFNIPASQLRIYFHYQPSYYYLHVHFCYLMFDAPG
IYVEKAHLLSTVIRNLELMPDYYTKAVLSYVVSKGSPLYEKFKSHGVLMPETSETCETR
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaaatatgcaattgctaatgacgagcaatgcccgccaacgaagagagccaaa
ttagacgacaaaagtttgaccgagaacgcaaaggaagaaaacgcgagcacgaatgcgaac
gggaaaaccccgagcgaaaacgatgacggcggcgtacatgaaagtgaattgaacctatcg
gcattcgaagtgacgagggtgctgcagaataattgcgcgcggaaattgatatgtttagag
ggaaaattcgaggaccgcgagggcccagcggtggttctactcgagcagaagagtttccct
tacgacaacttggtcctaaagaagaatttctttgatgagaaaacaattttcgaaaaacac
tttacgaatgatatctacggaaattatgattgtttcccatcgggcagatgcaacagttta
aaagcgactgtagtatatccagccacgcaaaatcatattgacaagtataagaaacaacaa
ttacatataatagacgaaacgtatgaactctatgaacaagttactcttcctcacatagag
tctacgagtttcagtttggagtggataactaatatactggagcataaagccgaacaggaa
agtgttatttacgaggatcctgacaaagatacaggttttgtattggtgatagattacaag
tgggacaagcagccagacacgttaaagttactagctctgccttttcaaaagataagatcg
ttgagggagttgaatggctctcacctccctttattaaaaaatataagagacgctggaaca
gcggcgattagcaagaaatttaatatacctgcatcacaacttagaatatattttcattat
caaccatcgtattattacttacatgtgcacttttgctacctcatgtttgatgcgccaggt
atatatgtggagaaagcgcatcttttatcaacagttatacgtaacttggaattgatgccg
gattactatacaaaagcagttctctcttatgtagtgtctaaaggtagtccactctatgaa
aagtttaaatcgcatggagtcttgatgccagaaacatcggagacgtgcgaaacacgttag
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