Ooceraea biroi (clonal raider ant): 105276856
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Entry
105276856 CDS
T05778
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4 isoform X2
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
105276856
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
obo04990
]
105276856
Domain-containing proteins not elsewhere classified [BR:
obo04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
105276856
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
TSP_1
ADAMTS_spacer1
TSP1_CCN
TSP1_spondin
PLAC
CRR42-like
Motif
Other DBs
NCBI-GeneID:
105276856
NCBI-ProteinID:
XP_011333110
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Position
3:9850889..9863434
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AA seq
622 aa
AA seq
DB search
MQQYEVRFASCHLIDGIFTEPTLEPGYNLVAVIPRGALALNVTELRHTQNYLAIRLQDGS
YLLNGNYSINWSGEYKAAGTTFVYLRQGPQNLESFSAAGPLQEPIAVMVLYQEPNPGIVY
RYVIPGNTNLPRSTHLVHNTVFNKDLEAGLQNRRVENESAVSDVTSPSYLPRRYKKRKFT
WKAIGYSECSKSCGGGVQVLRHVCIKEHTQQQVPEKRCHALEKPREIRLRCNTRPCPPRW
RGGPWSDCSTSCGAGVRTRELECVQEVKPSLIVRIADGACTEPKRLPTSEACEMPECNEE
IKQTLMQTSSQLSIPRWTAGGWSQCSTSCGTGRRTRIVTCVTQGAPCNLSEKPEAHETCD
LRPCLAKSASLNIVSEKLQSPQWLFTEWSDHCSAECGTGVQTRRIFCETNSDDKYCDESS
RPETSRDCASNKTCSGQWFTGPWTECSSKCDLGEQVRDVVCVTILRGSLRVVLDMNCPAN
KPETRKPCREHPCMSTWFISDWTSCSRSCGKGIQKRDVRCLNPDGQLPEPHQLHCREEDR
PISRRICNDHLCKDDLRVPGNSHRVLQVQDDSEISNGVEDNHPLCRDKIPNCNLVTQARL
CSYQFYQESCCLSCSRAKQDLK
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgcaacagtacgaagtgagatttgctagctgccatctgatagatggaatcttcacagaa
ccgactttggagcctgggtacaatttggtggcagttatcccgcgtggcgccttggcattg
aacgtgaccgaactccgccacactcagaattatcttgcgatcagattacaagatggcagc
tatttgttgaacgggaattacagtatcaattggtccggcgaatacaaggcagccggaaca
acgtttgtctaccttcgtcaaggccctcagaatttagagagcttttccgctgcaggtcca
ttacaggaacccatagctgtcatggttttataccaagaaccgaatcctggtatagtttat
cgatacgtgattcctggaaatacaaatctaccaagaagcactcatcttgtgcataataca
gttttcaataaagatcttgaagctggcttacaaaatcgaagagttgagaatgagtctgca
gtgagtgatgtaacgtctccatcatatttaccacggcgttacaagaaaaggaaattcact
tggaaagcaattggttacagcgaatgcagcaaatcgtgcggtggaggtgttcaggtactc
agacacgtatgcatcaaggaacacacgcaacagcaagtaccggaaaagagatgccacgcg
ttggaaaagccgcgggaaattcgtcttagatgcaataccagaccgtgtccacccagatgg
cgtggcggaccatggagtgactgttccacttcctgcggtgcgggagttcgtactcgagaa
ctggaatgtgtccaggaggtaaaaccttcattgatagtgagaattgccgatggcgcctgc
acggagccaaaacgtctaccgacgagcgaagcatgtgaaatgccagagtgcaacgaagaa
attaaacaaactttgatgcagacatcttctcaattatcgataccgcgatggactgcggga
ggttggtcgcagtgttccacatcttgtggcacaggaagaaggacgagaattgtaacttgc
gttactcaaggtgcaccatgtaatctctcggaaaaacctgaggcacatgaaacctgcgat
ttaagaccatgtctagcaaagtcagcgtcattgaacattgtttctgagaagcttcaaagc
ccgcagtggttatttactgaatggtctgatcattgctccgcggaatgtggaactggagtt
cagactagaagaatcttttgtgaaacgaattctgatgacaaatattgtgatgaatcgagt
cgacctgagacttcgagagattgcgcaagcaacaagacttgcagcggtcaatggtttacg
ggaccatggacagagtgttcttcaaaatgtgatttgggtgagcaagttcgagatgtggta
tgtgtaacgattcttcgcggttctctacgtgtcgttctcgatatgaattgtcctgcaaac
aagccggaaacgaggaaaccctgcagagagcatccttgcatgtccacttggtttatatcg
gattggacatcgtgctcgcgatcttgtggtaaaggcatccagaaacgcgatgtccgttgc
ttaaatccagatgggcaattgccagaacctcatcaacttcattgccgagaagaggatcga
ccaatatcccgaagaatttgcaacgatcatctttgcaaagatgatctacgagtgccagga
aattctcatagagttttgcaagttcaggacgattccgaaatatcgaatggtgttgaagac
aatcatccactttgcagagataaaatacctaactgtaacttagtcacgcaagctcggctc
tgctcttaccagttttatcaagaatcttgctgtttgtcatgttctcgagctaagcaagat
ttgaagtag
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