KEGG   Ooceraea biroi (clonal raider ant): 105277011
Entry
105277011         CDS       T05778                                 
Name
(RefSeq) THO complex subunit 7 homolog
  KO
K13176  THO complex subunit 7
Organism
obo  Ooceraea biroi (clonal raider ant)
Pathway
obo03013  Nucleocytoplasmic transport
obo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:obo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105277011
  09122 Translation
   03013 Nucleocytoplasmic transport
    105277011
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:obo03019]
    105277011
   03041 Spliceosome [BR:obo03041]
    105277011
Messenger RNA biogenesis [BR:obo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     105277011
Spliceosome [BR:obo03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    105277011
SSDB
Motif
Pfam: THOC7 FPP FliJ Omptin DUF4407 TPR_MLP1_2 PUMA_CC DapH_N DUF641 Med8 UPF0242
Other DBs
NCBI-GeneID: 105277011
NCBI-ProteinID: XP_011333422
LinkDB
Position
3:complement(11608258..11609970)
AA seq 203 aa
MSDEEVIRRRLLIDGDGTGDDRRINILLKSFIKWINSSDMDNTLHERMLSQLAQCEFAQK
KSRLVSNMSREELENYETLSKEIEIQIEEAKEEIENTKAELQDAKRVRKNRIEYDVLAKV
INEQPDRLETDIKLATLRQELGSLKEKSEQLEHKLEMRRKQFHVLISSIHSLQGMLDECN
EEIMDLSLENDTEIMDVVMYKGS
NT seq 612 nt   +upstreamnt  +downstreamnt
atgtctgacgaggaagtgatacgccgacggcttctcatagacggcgatggtacaggagac
gatcgtaggatcaacatactattgaaatcattcataaaatggatcaacagctcagacatg
gacaatacactgcacgagaggatgctgtcgcagttggcgcagtgcgagtttgcacagaag
aaatccagactagtgtcaaacatgagtcgagaggagctggagaactacgagacgctgtcc
aaggaaatcgagatacaaatagaggaagccaaagaagaaatagagaacactaaggcggag
ctgcaggacgccaagcgcgtgaggaagaaccgcatagaatacgacgtattagcaaaagtc
atcaacgagcaaccggaccgattggaaacggacatcaagctcgccacgttacgacaagaa
ctgggcagtttgaaggaaaaatcagagcagctggaacacaagttagaaatgcgtcgcaag
cagttccacgttctcatatcgtccatacactctctgcaaggaatgctagacgagtgtaac
gaggagataatggatttgagtctcgagaatgacacggagatcatggatgtggtcatgtac
aagggttcatga

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