Ooceraea biroi (clonal raider ant): 105277224
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Entry
105277224 CDS
T05778
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35 isoform X1
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
obo
Ooceraea biroi (clonal raider ant)
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
obo03041
]
105277224
Enzymes [BR:
obo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105277224
Spliceosome [BR:
obo03041
]
Complex C
Other components
Complex C specific factors
105277224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
ABC_tran
nSTAND3
AAA_19
FERM_M
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
105277224
NCBI-ProteinID:
XP_011333742
LinkDB
All DBs
Position
3:15634977..15642649
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AA seq
683 aa
AA seq
DB search
MHRPVFSKPGDNMWQEDKPDIDAHSATQFVYNAHHSLALNMQRQRLPIFKNKDHIIYLLE
KYQTLVLVGETGCGKSTQVPQYLFEAGWCADGKKIGITEPRRVAATSLANRVADERNCIL
GSIVGYCIRFDDYTDETTKIKYMTEGILLRELMSDPLLRSYSVIILDEVHERTLLTDIIM
GLLKKIIRKRKSLRVIVSSATVDAEELRDFFNVNTTKDPNKDSAVIVSIEGRLYPVEIFF
LKEPVANYVNGVVDTVLKIHETEEPGDILAFLTGLDEVDRAVSLLSEHAKLIKDGKQKLL
PLPMYGSLPNAEQLKVFWRAAKDTRKVIVATNIAETSITIPNIVYVIDCGFVKIPWFEAE
TQTNSLVIVPVSKASADQRAGRAGRIRTGKAYRLYTEEAYAGFFDATPPEMQRSDLAPAV
LQLKALGIDNVLRFNFPSAPPSKNLVAGLELLYALGAIDSNGGLTTPLGLTMAEMPLEPV
LAKSLIASGEMECSEEIMTILAMLQVQNIFVQPGGGQAALKARIAHRKFEVEEGDLLTLL
NVYAAFERNKTPAWCQRHFLNHKALRRATEIRAQMQRMLKRLDIPFVSCNGNVQQILKCL
TAGLFPKVAYLHYTGVYKTVRGNRDLYIHPNSCLYTLQQPQWLLFCEILQTNKTYMKDVT
VIQPEMLLEAAPHFYERASLEQF
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgtccggttttctccaaaccaggagataacatgtggcaggaggataagccggac
atcgatgcccactcagcgacgcaatttgtttacaatgcacaccactcgcttgcgcttaac
atgcagcgtcaacggctgcctatatttaaaaacaaggatcatattatttatttgttagag
aaatatcagacgcttgttctggtgggtgaaacgggctgtggtaaaagcacacaggtgcct
cagtatctcttcgaggcaggatggtgcgcagacgggaaaaagatcggtatcacggaacct
agaagagtggcagccacctctttggcgaatcgtgtagccgacgaacgcaactgcatccta
ggaagcattgtgggttactgcatacgcttcgatgattacaccgatgagactacgaagatt
aagtacatgacggagggcattcttctgcgggaattaatgagcgacccactattacgaagt
tattcggtcattatcttggacgaagtgcacgagagaacgctcttgactgacatcataatg
ggactgctgaaaaaaataatcagaaaacgaaagagtctaagagtcatcgtctcttcggcg
acggtggatgctgaggagcttcgagatttcttcaacgtgaatacaacgaaggacccgaac
aaagacagcgccgtcatcgtgagcattgagggacgtttgtatccggtagaaatatttttt
ctgaaagaaccggtcgcgaattacgttaacggcgtggtagacactgttctaaaaatacat
gaaactgaagagccaggcgatatcttggcgttcctaacgggactcgacgaggttgatcga
gctgtctctctcttatcggaacacgcaaagctcataaaagatggcaaacagaaattgctt
ccgttgccaatgtacggatcgttaccgaacgctgagcagctaaaggtgttctggagggcc
gccaaagacacccgtaaagttatcgtggcgaccaacatcgcggaaacgtccatcaccatt
ccaaatatcgtttatgtaatcgattgcggtttcgtcaagataccttggttcgaggcggaa
acgcagacaaacagcctcgttatcgtgcccgtgtcgaaagcctctgccgatcagcgagcc
ggtcgcgctggtcgcattcgtacaggcaaggcatatagattgtacacggaagaagcttac
gccggattttttgacgctactccaccggagatgcagcggtcagatttggcgccggcggta
ttgcagctgaaagcgctgggtatcgataacgtgttgcgattcaatttcccgtccgcgcct
cccagcaagaatctagtcgcgggcttggaattactttacgcgctgggcgcgatcgacagc
aatggaggcttgacgacgccgttaggcttgacgatggcggaaatgccgctggagccggtg
ctggcaaagtccttaattgcttctggtgaaatggaatgttccgaagagattatgacgata
ctcgctatgctgcaagttcagaatatctttgtgcaacccggtggaggacaggcagccctg
aaggcgaggatagcgcatcgtaaattcgaggtggaagagggcgatctccttaccttgctg
aacgtctacgcggcttttgagcgcaacaaaacgcccgcctggtgccagagacactttctc
aatcacaaagctctgcgaagagccacagaaattcgcgcgcagatgcagagaatgctgaaa
cgtttggatattccgtttgtgtcctgcaatggaaatgttcaacagattcttaagtgtttg
acggccggtctcttccctaaagtggcgtacttgcattatacaggcgtgtacaaaacggtt
cgaggtaacagagacctgtacattcatccgaatagctgcttgtatactctgcagcagcca
caatggttattattttgtgaaatattgcaaacgaataaaacttatatgaaggatgtgacc
gttattcagccagaaatgttgctggaagcagcaccgcacttttacgaaagagcatctctc
gaacagttttag
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