Ooceraea biroi (clonal raider ant): 105277307 Help Entry 105277307         CDS       T05778                                  Name (RefSeq) 5'-3' exoribonuclease 1   KO K12618   5'-3' exoribonuclease 1 [EC:3.1.13.-] Organism obo  Ooceraea biroi (clonal raider ant) Pathway obo03008   Ribosome biogenesis in eukaryotes obo03018   RNA degradation Brite KEGG Orthology (KO) [BR:obo00001]  09120 Genetic Information Processing   09122 Translation    03008 Ribosome biogenesis in eukaryotes     105277307   09123 Folding, sorting and degradation    03018 RNA degradation     105277307  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:obo03019]     105277307    03009 Ribosome biogenesis [BR:obo03009]     105277307    03016 Transfer RNA biogenesis [BR:obo03016]     105277307    03036 Chromosome and associated proteins [BR:obo03036]     105277307 Messenger RNA biogenesis [BR:obo03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Common to processing body (P body) and stress granule      105277307   mRNA degradation factors    5'-3' decay     5' exonucleases      105277307 Ribosome biogenesis [BR:obo03009]  Eukaryotic type   Pre-60S particles    RNases     105277307 Transfer RNA biogenesis [BR:obo03016]  Eukaryotic type   tRNA degradation factors    Rapid tRNA decay (RTD) pathway factors     105277307 Chromosome and associated proteins [BR:obo03036]  Eukaryotic type   Gene silencing    piRNA pathway     105277307 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  XRN_N XRN_M XRN1_D2_D3 XRN1_D1 SH3_12 Dicer_dimer Motif Other DBs NCBI-GeneID:  105277307 NCBI-ProteinID:  XP_011333875 LinkDB All DBs Position 9:13762524..13771925 Genome browser AA seq 1664 aa AA seqDB search MGVPKFFRYISERYPCLSEVIKEHQIPEFDYLYLDMNGIIHTCSHPNDNDVCFRISEETI FKNIFHYVEVLFNMIRPQKLFFMAIDGVAPRAKINQQRGRRFRSAKDAELQEAKARDKGI PIPSEKRFDSNCITPGTLFMAKLSEQLKRFIEHKISMDEAWKKCKVLFSGSEVPGEGEHK IMDYIRYMKVSDDYDCGSRHCLYGLDADLIMLGLCSHEPNFSLLREEVKFGKQQVKMTPE ETKFCLLHLSLLREYIEHEFSPLKDKLSFPFDIEKIIDDWVLMGFLVGNDFIPHLPNLHI ANGALPILYHAYMEVLPTLEGYINEAGTLKLDRFEKFMEKLSRLDVEQFNEYYTDLKFFE SKTGRRPNESERHVYKKSEEDEIASPKKTQNKDLDALIEMTQMSLGLSDEDDDDIIDTID MMDDESDSDIYNMEFVQHKKDYYMNKLEYENVDAEVLRSQAEGYVRAIQWNLHYYYHGCC SWSWYYPHHYAPYISDIRDFKDLKLEFDLGEPFLPFQQLLAVLPAYSKDLLPPAFQHLLT EESSPIINYYPHNFKTDLNGKRQEWEAVVLIPFIDEKLLLAAMQPHLSKLIDEEHTRNKQ GPMCLYSYTDEIRSIYKDTKYFPEFISHAQVTQMNRNDIFVPKERLVQGLAQDFDLDVYY PGFPLLRHLPHKASLEKAKVKVFQQPSLGENMILYIMLEAPPSLPTLAAELLGKSVYVEW PHLKEALVCAVASRSAKFSLIDPLAGYNHDNVTKEELKNASVDEWNGQNKLVKETHMTRL GIAIGDTEVLVYARLFTGYKYVFGPQGKVAIEKQWQDLLTFHAYQTVVRDLSVSNKKIPI YKTMHDIFVPGIICFMLGHPCYGAMGEVLQNIDNPRPRRIKISIQVTKEPTFESIKKAYT QQKTRYMYGGIAAQRLGISSHLLSRITGTIYVIEASQEELAKHNIGLNLKFNKKNEEVPG YTRKENGQWLYSTKAVDLIRNYMMKCPDLFERLAQNVTNDIFQEQDLFKGSDQLKDTVAW LKAELHGIGSRACGMDVIETELVQQIEQEVEEYLKTENNSKTVFIQVKPHLLFKPELNTR HVPPDPCVQNRLFDRIRTIRIGFSVPIGAKGTIVGIRKAKIPTDVVYEVLFDKPFIGGLT LQGCSQFRGYHLAPTDFVNISFGERTERGNPANESVELRKQTANANTSPSKKSDQLPKAV LEMQVAKKELEKLMSRDSHLAQRGMIETNPKMVPHKAMVPQRALHQLECAPPNNEIPNEN EVSCQEFQDLWNELHKQVVLVPYKKPDRPPARVTPSPMMTPDKQPMKPTGNSHNVQSPQD PSAFLKAVLKIPDVNAQTSKQPSKQSTSQPPAVHQKVMVARKDQPSDAPPLVQQMFDHAR RRTEEKKEKGNPIWYSSQLMKHFAYNSVPKYNYLVDEKNGLISAQIILDNARVFKGDPCT SHEQAAESAAKKAYKALNLDKAHSAKMMMVPRPQWYNNQQNNWVQNIGPPMIAICPPKIT PIPQTPPMQPNLFYPKWNQKLPPNPAFGQAASYSQGRQQQGRPRNPQNEPKIEVRNTTAF VPLQAQKKSRHASAKQASTEANVNAKKIITPKTQQQQKREETPLEHQKPAVVNTMREKAV STSAQQQLSQQPQQNTGKTSKPRKSRVAAKFGAPALSNGSETSQ NT seq 4995 nt NT seq  +upstreamnt  +downstreamnt atgggtgtgccgaaattcttcagatacataagcgagaggtatccctgcctcagcgaggtc ataaaggaacatcagataccggaattcgattatttatatttggacatgaatggcatcata cacacgtgttcccatccaaacgacaacgacgtctgcttccgcatctccgaggagactatt ttcaagaatatatttcactatgtagaggtgttgttcaacatgatacgtccacaaaagctg ttcttcatggcgatagacggcgtggcacctcgagctaagattaatcaacagagaggtcgg cgatttcggtccgccaaggatgccgagctgcaggaggcaaaggcccgcgataagggtatc ccgatacccagcgagaagcggtttgattcgaactgcataactccgggaacgctgttcatg gctaaattaagtgagcagctaaaacgcttcattgaacataagatttctatggatgaggct tggaaaaaatgtaaagtactgttcagtggatctgaggttcctggagagggagaacacaaa atcatggattacataagatacatgaaagtgagcgatgattatgactgtggctccaggcac tgcttatatggcctggacgctgatttgataatgttaggcctctgttcgcacgagcccaat ttttccctcctgagagaagaagtgaagtttggtaaacagcaagtgaaaatgacacctgaa gagacaaagttttgtttgcttcatctgtcactcttgcgagagtacatagagcatgagttc tcgccacttaaagacaagctgtcctttccatttgacattgagaaaataatcgacgattgg gtattaatgggtttcctagtggggaacgactttattccccatttgccaaatttacatatt gccaatggcgcgttaccaatcctgtatcacgcgtacatggaggtattaccgacgctagaa ggttatataaatgaggccggaacgttaaaactggaccgtttcgagaagtttatggagaag ctgagccgtttagacgtagagcagttcaatgaatattatactgatttaaaattttttgaa agtaaaacaggtagaagacccaacgaatccgagcgtcatgtatataagaaatcggaagaa gacgagattgcatctccgaagaagacacaaaataaggatttagacgctctaattgaaatg acacagatgtccttaggtctttccgatgaggatgacgatgacataatagatacaatagat atgatggacgacgaatcggatagtgatatatataacatggaatttgtacaacacaagaag gattattacatgaataagctagagtacgaaaacgtcgatgcagaagttctacgatcgcaa gctgagggctacgtaagagcgatacagtggaatctgcattattattatcatggatgttgc agctggtcgtggtattatccacatcattacgccccatacatttcggatataagagacttc aaagatttgaaattagaattcgatttgggagaacctttcttaccctttcaacaattgttg gccgtgttgccagcatatagcaaggacctgttaccgccagcatttcagcatttattgacg gaagaatcttctcctatcatcaattattatccgcataattttaaaaccgacttaaacggc aaacgacaggaatgggaagcagttgtactcattccgttcattgatgaaaagctgttattg gctgctatgcaaccacacttgtcgaagttgatagatgaggagcacacaagaaacaagcag ggaccgatgtgcttgtactcgtataccgacgagatacgaagtatttacaaggatacaaaa tattttcctgaatttatcagtcatgctcaagtgacacagatgaaccgcaatgatattttc gtaccgaaggaacgattggtccaaggcttggctcaggatttcgatctcgacgtttattat ccaggattccccttgttacggcacctgcctcataaagcatccttagaaaaagcaaaagta aaagtattccagcaaccatcactgggagaaaatatgattctatacataatgttagaggca ccgccaagtctgccgactttggcagcggagttattagggaagagcgtatatgtggagtgg ccccatttgaaagaggcccttgtatgtgctgtggctagcagaagcgcaaaattcagtttg attgacccgttagccggttacaatcatgacaatgtgacgaaggaggagttaaaaaatgcg tcggtcgatgaatggaatggacagaacaagctcgtcaaagaaacacacatgacacgtctt gggattgctataggtgatacagaggtgttggtttacgcccgcttattcacgggctacaag tacgtttttggtcctcaaggaaaagtggcaatcgaaaaacagtggcaggatttactcaca tttcacgcttatcagactgtagttagagatctttctgtctccaacaagaaaataccaatt tacaaaaccatgcatgacatttttgtaccagggatcatttgtttcatgctgggacatcca tgttacggtgcaatgggagaggttctgcaaaacatcgacaatccaaggccacgcagaatc aaaatttctatacaagttacaaaggagccaacgttcgagagcattaaaaaagcgtacaca caacaaaagacgcgatatatgtacggcggtattgctgcgcaacgtcttggaataagcagt catcttttgagcagaattactgggacgatttatgtaatagaggcatcacaggaggaactt gccaagcataacattggattgaacttgaagtttaataaaaagaacgaagaggtacctggt tatactagaaaggaaaatggtcaatggctgtatagtacaaaagcggtcgatttgattcgc aattacatgatgaagtgtcctgacttgtttgaacgtttggctcaaaatgtaacgaatgat atcttccaagagcaggacctattcaaagggtcggaccagctcaaagatacagttgcgtgg ctgaaggcggaactacacggtataggaagccgtgcttgtggcatggacgttattgagaca gaactggtgcaacagatcgaacaagaagtagaggaatatctgaaaaccgagaataactcg aaaacggtctttatacaagtaaagccacatctgcttttcaagccggaattgaacacgcgt catgtgccacctgatccatgtgtccagaatcgtttgttcgatcgaatccgcaccatcaga atcggctttagtgtgccaatcggtgcgaaagggacaattgtaggaatacgaaaggcgaaa attccgacagatgtcgtgtacgaggtcctcttcgacaagcctttcataggtggcctcact ttacaaggttgctctcaattccgtggctatcacctggcgcccacagatttcgttaatatt agtttcggcgaaagaacggagcgaggaaatccagcgaacgaatcggtggaactccgaaag cagacggcgaacgcgaacacatcgccaagcaagaagagcgatcagttgccgaaggccgtc ctggagatgcaagtcgctaagaaagaacttgagaaattgatgagtcgagacagtcatctg gcacagcgcggcatgatagaaacaaatccgaaaatggtaccgcacaaagcaatggtgccg cagagagcgttgcaccaactcgagtgcgcgccgcctaataacgaaatacctaatgagaat gaagtgtcatgtcaagagtttcaggatctatggaatgaattgcacaagcaagttgtgcta gtaccgtacaagaaaccggacagacctccggcaagagtaacgccaagtccaatgatgaca ccggacaagcagccgatgaagccgactggcaacagtcacaacgtacaatcgccgcaagat cccagcgcatttttgaaagctgtattaaaaatccccgatgtaaacgcgcagacaagcaag caaccgagcaagcagtctacgtcgcaacccccggcagtgcaccagaaggtgatggtcgcg agaaaagatcaaccgtcggatgctccacctttggtgcaacagatgttcgatcatgcacgc cgacgaacagaagaaaaaaaggaaaagggaaatccaatctggtatagctcgcagttgatg aaacactttgcgtacaacagcgtaccaaagtataattatcttgttgacgagaaaaacggt ctaatcagcgctcaaattatactagacaatgcgagagtttttaagggtgatccctgtact agtcacgaacaagctgcagaaagtgctgcgaaaaaagcatacaaggctttaaatttggat aaggcgcatagtgcgaagatgatgatggtgcctcggccgcaatggtacaacaatcagcaa aataattgggtccaaaatatagggcctcctatgatagcgatatgtcctccaaaaataaca ccaatcccacaaactccgcctatgcagcctaacttattctatccaaaatggaaccagaaa ctgccaccaaatccagcgtttgggcaagccgcatcgtacagccaaggcaggcaacagcaa gggaggccaaggaatccgcaaaacgaaccgaagatagaggtcaggaataccactgcgttc gttccattgcaggctcagaaaaagagtagacacgccagcgcgaagcaggcatcgacagaa gcgaatgtaaatgctaagaagattattacccctaaaacacaacagcaacaaaaaagagaa gaaacgccactcgagcatcagaagccagcggttgtaaatacgatgagggaaaaggcagtg agcacgtcagcacagcaacaactgtcgcagcaaccccagcagaatacgggaaaaacgtcc aagcccaggaaatcgcgcgttgccgcgaaattcggcgcgccagctctgtcgaatggcagc gaaacatcgcagtga

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