Ooceraea biroi (clonal raider ant): 105277382
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Entry
105277382 CDS
T05778
Name
(RefSeq) neogenin isoform X1
KO
K06766
neogenin
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
105277382
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
obo04515
]
105277382
Cell adhesion molecules [BR:
obo04515
]
Immunoglobulin superfamily
DCC/UNC5 family
105277382
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Neogenin_C
I-set
Ig_3
Ig_2
Ig_DSCAM-DSCAML_C
ig
Pur_ac_phosph_N
V-set
C2-set_2
C2-set_3
Ig_J
NDNF
fn3_2
Motif
Other DBs
NCBI-GeneID:
105277382
NCBI-ProteinID:
XP_011334019
LinkDB
All DBs
Position
9:complement(12928449..12952877)
Genome browser
AA seq
1492 aa
AA seq
DB search
MEPRPLAVLLALLLTALARADAGGLDFTIEPQDVVVEQGGPARLDCAATSVFGTPSIHWR
TDDGQPITFIGDSYRSQLANGSLYINSVYAGSAELTGSYQCLASIDNVGAIVSRTATIKL
ASLPGFEREPQDTMVYAGQTAYLSCALPASSSLLKIQWLKDEHPLVLDKNRMTILPSGAL
EIDNVQYNDVGSYRCNASGYGQNRLSNKAQLGLLSSDIDEGSSAPVFIAQPLQQVVAVVG
SDVTLECAANGYPKPTILWLKDGVALDLTSFDSRYREVAASSLVIMNVRESDHGSYQCRA
ENEVESLDAVAELIVQVPPKFIKKPEDKVASENQDLEFECEIYGKPEPKITWLKNGERIT
LSAYWQIVNGYNLRINGLLPIDAGIFQCIGVNPAGSVQASARLTINQPKRTNPRRITTPK
TVPKKKLLLHRQLYNNTWQHPSTLLGHTLSSLTPNPPLSISPSDDPADLLPGSVKYPNSL
YDPASRFVDDTDILEAFDGGGVPSPPRNLSVVILTARFVTLRWQEPENMNSDTLNYFIHY
KQEGAMRERVVNTQKLEAMIRSLQPNMKYQFHVVAQNSRGTSTPSEVLHVTTLIEANVPG
PPMNLEGHATSSMSITLSWDEPQVINGRISKYIITFMEGDGEEVTRETTSTTYELVDLVP
YTEYSIRVQAVNENGPGAFSKDIAIRTHSAQPTQPPHNVTLEAASSTSIIIRWEPPLEGQ
NGIITGYRIRYRRYPHDPRSGDRRSPITVTTEGNQRLYVLNGLEKHVVYQVRICAFNVNG
TGPWTEWTKIETYENDLDETKVPNPPSNLRANAMADSILVTWHPPKDQSIKVRKYKLGWG
KGYPDVEIQVLDGKQRSYSIKHIEPTTEYVISLRATNNIGDGPPTYANVRTPERFVSESA
VPLIPPVGLKAIVLSATTVVLYWTDTTLSKSQYVTDNRYYMVRYTSYHHSSNPRYKYYNA
TDLNCMIHDLKPNTQYEFTVKLVKGKRSSPWSMVVLNQTQEAAPSTPPRDLSVQTIEDRP
TSVLLRWQPPKQVNGQITGYLIFYSTDNTKRDRDWLLEGVIGDKVDTIVKNLHPSTTYYF
KIQARNSKGYGPFSTTVSFKTPQSNGMDVYDELHGRDGRGLSNLLIYIIVGFAIVILTGI
SVVVVVCCKRNPNSPDRKKGYMNDSNQKTNIKPPDLWIHHDQMELKALEKSSLNGEASTS
GVTSNTLPRSGNTEYNQDNVHGNSSSLDKRTYVPSYMGNTDEKCSTLSRQHSRGSHKPKL
ITLPVDSAPLHQPIATATPIVNTSMSQPTIHTSCSDTSVRQNYPRTVAQYSLNRAHVTLE
PTPESSPDSCNMPSSYEPLQSQLSYGTSSGQSYSGNTQYASSHYGNSNQPMSNTVGLESN
NSKRLQGHPLKSFSVPAPPPQSAPSTPAQQKHGVSQVTVRPTMSGSPYKKPQSSSSQLAK
NRLASVSNPTHTSEEVERLKPSYSTEELNQEMANLEGLMKDLNAITASEFEC
NT seq
4479 nt
NT seq
+upstream
nt +downstream
nt
atggagccgcgtcctctcgccgtcctgctggctttgttgttgacagcgctcgcgcgagcc
gacgcgggaggcttggacttcaccatcgagccgcaggatgtggtggtggaacagggcggc
cctgcgagattggactgcgcggcgacgagcgtcttcgggacaccgagcatacattggcgt
acggacgacggtcagccgatcacatttatcggggacagctatcgatcgcagctagcgaac
ggatccttgtacataaatagcgtatacgccggtagcgcggaattaaccgggagttatcag
tgcttagcctccatagataatgtcggagcgattgtctctcggacagccacgatcaaacta
gcaagtctgcctggtttcgaaagggaacctcaggacaccatggtctatgcgggacagacg
gcgtatttaagttgcgccctacccgcctcgtcgagtttgttaaagatacagtggttgaag
gacgagcacccgttagtgctcgataaaaatcgaatgacaatcctaccgtcaggcgcgttg
gaaattgacaatgttcagtataacgatgttggatcgtacaggtgtaatgccagtggatac
gggcaaaatagactgagcaacaaagcacaattaggattattatctagtgacatcgatgag
ggatctagcgctccagtatttatcgcacaacctttacaacaagtagttgctgtagtagga
tccgacgtaactcttgaatgtgctgccaatggttatccgaaaccgacgatcctttggctt
aaagacggtgttgctctcgatttgacgtcatttgattccaggtatcgtgaagttgcagcc
tctagtctcgtaatcatgaacgtcagagaatcggatcacggttcgtatcagtgtcgtgca
gagaacgaagtggaatctctcgacgcggttgctgagttaatcgttcaagttccaccgaag
tttataaaaaagccggaggacaaagtggcgagcgaaaatcaggatttggagttcgagtgc
gagatctatggaaaacccgaaccgaaaattacttggttgaagaacggcgagcggatcacg
ttgagtgcatactggcagattgtcaatggatacaatttgaggatcaacgggttgttacct
atagacgcaggaattttccagtgcataggagtgaatccggccggtagtgttcaagcctcg
gcacgtctcacgatcaatcaacccaagagaacgaaccctcgcagaataacaactcccaag
acagttcctaagaaaaagttgttacttcatcggcagttgtacaacaatacatggcaacac
ccgagcactctcttaggacacacgttgtcatcgctcacgccaaatcctccgctttctata
agcccctccgacgatcccgcggatctccttccgggttcggtcaaatatcccaattccctt
tacgatccagcttcccgttttgtagatgatacagatatcctggaggcattcgacggcggt
ggagttccctctccgccacggaacttgagcgtggtcatcctcaccgcgagatttgttacg
ctacgctggcaggagcctgaaaatatgaacagtgacaccctcaattatttcatacattat
aaacaggagggggctatgagagagagagtcgtcaacacgcagaaactagaggctatgata
cgcagtctgcaacctaatatgaagtatcaattccatgtggtcgcgcaaaactcgcgagga
actagtactcctagtgaagtattacatgtcacgacgctaatagaggccaatgttcctgga
cctccgatgaatctagaaggtcatgcgacgagtagcatgagtattaccttgtcgtgggat
gagccgcaagttattaacggtcgaatatctaaatatattattacatttatggagggtgat
ggtgaagaagtaacgcgtgaaactactagtacaacgtatgaattggtagatctcgtgcct
tatacggaatacagtattagagttcaagcggttaacgagaatggcccaggcgcgtttagt
aaggatatcgcgattcgaactcacagcgcacaacccacgcaaccaccacataatgttacg
ttagaagcagctagttcaacgagtattatcataaggtgggaacctccgctcgagggacag
aatggaattatcacgggttacaggatccgttaccgtagatatccgcacgatcctcgttcc
ggcgatcgacggtcaccaatcacggtaacgactgaaggaaatcaacgtttgtacgtgctc
aatggactcgagaagcacgttgtgtaccaagtccgcatatgtgccttcaacgtcaatgga
actgggccttggacggaatggacaaaaatagagacgtacgagaacgatttggacgaaacg
aaagtacccaacccgcccagtaatttgagagcgaatgctatggcggattctatccttgtt
acgtggcatcctccgaaagatcaaagtataaaagtgaggaaatacaagttaggctggggt
aagggttaccctgacgtcgagatccaggtcctcgatggaaagcaacgatcttactctatc
aagcatatagaaccaacaacagagtacgtaatatccctaagagcaacgaataatattggt
gacggtccaccaacgtacgcaaacgtaagaactcctgaacgttttgtatccgaatccgca
gtgcctttaataccaccggtcggccttaaagctatcgtgctctcggctactaccgttgtg
ttatattggactgacacgactttatcgaaaagccagtacgtcaccgataatcgatactac
atggtacgttatacatcctaccatcacagcagtaatccaagatacaaatattacaacgcc
actgatctcaactgtatgattcacgacttgaaacccaacacgcaatacgagttcacggtt
aaactggtcaagggtaaacgaagctcaccgtggagcatggtcgtcctgaatcaaactcag
gaagctgcgcctagcacgccacctcgagatttaagtgttcagaccatcgaagatcgtccc
acttctgttctattgcgatggcaacctcccaagcaagtcaacgggcaaatcacaggatat
ctaatattttattccaccgacaacacaaaacgggaccgcgactggctacttgagggtgtc
attggtgacaaagtggataccattgtgaaaaatttacatcccagcacgacgtattatttc
aagatccaagcacgcaattctaaaggatatggcccattctccacgacggtctcgtttaaa
actccacaaagcaatggcatggatgtctatgatgaattgcatggtcgagatggacgaggt
ctttcgaatctactgatttacatcatagtgggtttcgcaatcgtcattctgactggtata
tcagtagtggttgtagtatgctgtaaacgtaatccaaattcgcccgaccgaaagaaagga
tacatgaatgactcgaatcagaaaacaaatattaaaccaccggatttatggattcatcac
gaccaaatggagctgaaagcgctcgagaagtcgtcgttaaacggcgaagcttccaccagt
ggcgtcaccagcaacacattacccagatcgggtaataccgagtataatcaggataacgta
cacggaaattccagttcgctggataaacgtacttacgtgccaagttacatgggtaacact
gatgagaagtgctcgaccctgagtagacagcacagtcgtggcagccacaaacctaaacta
attacactccccgttgacagtgcacctttgcatcagcctatagctacggctactccgatt
gtcaataccagcatgtcgcagccgaccatccacacgtcatgtagcgacacgtcggtgagg
caaaactatccgcgtacagtcgcgcagtacagcttaaatcgggcccacgttacgttggaa
cccacgccggaatccagcccggattcttgtaacatgcctagttcatacgagccattacaa
agtcaattatcgtacggcacaagcagcgggcagtcgtacagtggaaacactcagtacgcc
tccagtcattatggtaacagtaatcaaccgatgagcaacaccgttgggctggagagcaac
aatagcaagcggttacaagggcaccctctcaagagcttcagcgtgccagcgccgccaccg
cagagtgccccttcaacaccagcgcaacagaagcatggtgtatcacaagtgacagtaaga
ccgacgatgtctgggagtccgtataaaaaaccacagagctcgtcgtcgcaattggcgaag
aatcgcttagcctccgtgtctaatccaacacacacgtcggaggaagttgaacggttaaag
ccttcgtacagcaccgaagaattgaatcaagaaatggccaacttagagggtcttatgaaa
gatctgaatgccataacagcatcggaattcgaatgctaa
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