Ooceraea biroi (clonal raider ant): 105277625
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Entry
105277625 CDS
T05778
Name
(RefSeq) vinculin isoform X1
KO
K05700
vinculin
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo04820
Cytoskeleton in muscle cells
obo05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105277625
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
105277625
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
obo04812
]
105277625
04147 Exosome [BR:
obo04147
]
105277625
Cytoskeleton proteins [BR:
obo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
105277625
Exosome [BR:
obo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
105277625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
I_LWEQ
Topo-VIb_trans
Motif
Other DBs
NCBI-GeneID:
105277625
NCBI-ProteinID:
XP_011334412
LinkDB
All DBs
Position
7:2425270..2436674
Genome browser
AA seq
1026 aa
AA seq
DB search
MPVFHTKTIESILEPVAQQVSRLVILHEEAEDGNAMPDLGRPVQAVSMAVTNLVKVGKET
INSSDDALLKQDMPAALRRVEGASRLLEEASAMLKQDPYSGPARKKLIEGSRGILQGTSA
LLLCFDESEVRKIIRECKRVLDYLAVTEVIETMEDLVHFLKNLSPCLSKVSREVSAREKE
LTHQVHREILVRCLDQVKTLAPILICSMKIFIHIISQGGKGADEAAENRNYLSGRMSDEL
NEIIRVLQLTTYDEEEWDADQLTVLKKAQSAIESRIRAAYDWLDDSLALRGGVGEKSLRQ
IIEQASRLAEHYLPPSQAEPMSKLTSQIITMTDALCELRQKEKGSTPQAEHLARCIKDKL
KELHGSVVSALVAADKSGTAQTAHTVAGRLEQANKWLLNPQHDDKGLGKRAIALIILEGK
KNEQPIANVAEGLPGIHKAEILQLCDEVDNLSHQLADLCSHGLGNTPRAQEIARQLSQKL
YELKNRIQQAVVSRVVEDFIDITTPLKQFTDAVLAPAGTPGRDQNFNDKTSALQTFSTRA
AKTARMVAAGGSGGNKKLAEALTASASQVESLTPQLVNAGRIRMTYPDSKAADEHFENLR
QQYAETMQRARALCDEATDSGDFIRISEEQMQKHSFLCEDAIAKALPQRMVDNTAAIARL
ANRVILVAKQESDNSEDPAFIQRVNHATNVLQNSVAPMVQDAKLVAMNIGDNTAVSRWRE
SNRALLNNVGQVRKAIVTQPDLVPPLEMSRLRIHDDEQIPIRLTYSKDKDKAKVETPDLF
DQELPSDNEIEKSIHDGDYYDYNIDDEVAPPRPPLPGGDIPPPRPPPPETDDEEEMFMHA
PQPNQPIMMAAHGLHQEVRQWSSKDNEIIAAAKKMAILMGRLSGLVRGEGGNKRDLIACA
KAIAEASQEVTRLAKELARECTDKRIRTNLLQVCERIPTIGTQLKILSTVKATMLGAQET
LPTWEELMLYGTEEDREATDMLVGNAQNLMQSVKETVRAAECASIKIRTASGMKLRWVRR
QPWYQY
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgccggtcttccacaccaagactatcgagagtattctcgagcccgtggctcagcaggtt
tcgagactggtcatcttacacgaagaagctgaagatggaaatgcaatgccagatttggga
cggccggtacaggctgtcagcatggctgtgaccaatcttgtgaaagttggaaaggaaaca
ataaactcgtccgacgatgctttgcttaagcaagatatgccagcggcactgcgacgcgtc
gagggtgcttcccgtcttctcgaggaagcatcggccatgctgaaacaggacccgtactcc
ggacctgccaggaaaaagcttattgaaggatcacgtggcattttgcaaggcaccagtgct
ctgcttctctgctttgacgagagcgaagtgcgaaagatcatacgcgaatgcaaacgtgta
ctggattatctggcggttactgaggtcattgaaacgatggaggacctagtgcatttcctt
aagaacctgagcccgtgcctgagtaaggtgtcgagggaggtgagcgcacgtgagaaggag
ttgactcatcaagtacacagggagatattagtgcgctgcttggaccaagtcaagacgctc
gctccgattctcatctgctccatgaagattttcatccatattatctcgcaaggtgggaaa
ggcgcggacgaagcggcagaaaatcgtaattacttatctgggagaatgtccgacgagctg
aacgaaattatccgagtgttgcaattgacaacgtatgacgaagaggaatgggacgccgat
cagttgaccgtgctgaagaaggctcaaagcgccatagaatccagaatacgagccgcttac
gattggttggacgacagtctggctctaaggggtggcgtaggggaaaagagcctccgtcaa
ataatagagcaagcgtcgcgtctggcggagcattacctgccgccgtcgcaggctgagccc
atgtccaagctgacctctcaaatcatcaccatgaccgacgctctctgcgagctgcgtcag
aaagaaaaaggcagcacacctcaagcggaacacttagcacgctgtattaaagacaaatta
aaagagctgcacggctcggtagtgtccgctttggtagcagcggacaaatcgggaactgca
caaacggcacacacagttgcgggtcggttagagcaagcgaataagtggcttctgaatccg
cagcatgacgacaagggactcggtaaaagggctatagctttaataatactcgaaggaaag
aagaatgagcaacctatagcaaatgtggccgagggcttgccgggtatacacaaggcagaa
attttgcaattgtgcgatgaagtggacaatctgtcgcaccagctcgccgatctctgctcg
cacgggctgggcaatacgccgcgtgcccaggaaatcgcacggcaattatcgcaaaaactg
tacgagctgaagaacagaatacagcaggccgtcgtgtcccgtgtcgttgaggatttcatc
gacatcactacacctctcaaacagttcacggatgccgttttggcacctgcgggcacaccc
ggccgcgatcaaaatttcaacgataagacgagcgcgctgcagactttttcgaccagagca
gcgaagacagcaaggatggtcgcagccggcggaagtggcggaaacaagaaattagctgaa
gcattaaccgcaagtgcctcgcaagtggaatctctgacgccgcagctggtcaacgccggg
cgaatccgcatgacttatccggacagcaaagccgcggacgagcactttgaaaatctgcgg
cagcagtacgcggagacgatgcaaagggcgcgcgcactctgcgacgaggcgaccgacagc
ggtgatttcatcaggatctctgaggagcagatgcagaaacattcgtttctttgtgaggac
gccatcgccaaggccttgccgcagaggatggtcgacaacacggcggccatcgctcgtctc
gcgaatcgagttatactcgtggcaaagcaggaaagcgataatagcgaagatcctgccttc
atacaaagagtaaatcacgcgaccaatgtcctgcaaaatagcgttgctccgatggttcag
gatgcgaaattagtggcaatgaacatcggcgataatactgcggtgtcgcgctggagggaa
agcaaccgcgcgttgctgaacaatgtaggacaagttcgtaaagctattgtaactcagcca
gacttggtacctcctctggaaatgtcgcggttacgcattcatgacgatgaacaaattcca
atccgacttacttactccaaagataaagataaagctaaagtggaaactcctgatcttttc
gatcaagaactgccctctgacaacgagatagaaaaatcgattcatgatggagattattac
gattacaatatagacgatgaagtggcacctcctcgtccaccattgccgggaggtgacatt
ccacctccaaggcctcctcctcccgagacagacgacgaagaggagatgtttatgcacgct
cctcaacccaatcaaccaatcatgatggccgctcatggtttgcatcaagaagtacgacag
tggtctagtaaggataacgagatcattgccgctgcgaagaagatggccatactaatgggc
agactgtcaggactggttagaggtgagggcggtaacaaaagggatcttattgcgtgtgcc
aaggctatcgcggaagcttcgcaggaggtcacacgtctcgctaaggagcttgctagggaa
tgtaccgataaacgtattcgaacgaacctccttcaagtgtgcgagcggattcccacgatt
ggtacacagttgaagattctgtccaccgtaaaagccaccatgctcggagctcaagagaca
ctcccgacctgggaagagctgatgctttatggtacggaagaggatcgagaagctacggac
atgcttgtcggaaatgctcagaatctcatgcaaagtgtaaaggaaacggtgcgtgccgca
gaatgcgctagcataaagattcgtaccgcttccggtatgaagctgcgctgggtgcgtcgt
cagccatggtatcaatattaa
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