KEGG   Ooceraea biroi (clonal raider ant): 105277638
Entry
105277638         CDS       T05778                                 
Name
(RefSeq) histone deacetylase Rpd3
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
obo  Ooceraea biroi (clonal raider ant)
Pathway
obo03082  ATP-dependent chromatin remodeling
obo03083  Polycomb repressive complex
obo04213  Longevity regulating pathway - multiple species
obo04330  Notch signaling pathway
obo04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:obo00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    105277638
   03083 Polycomb repressive complex
    105277638
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    105277638
   04350 TGF-beta signaling pathway
    105277638
 09150 Organismal Systems
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    105277638
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:obo03036]
    105277638
Enzymes [BR:obo01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     105277638
Chromosome and associated proteins [BR:obo03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     105277638
   HDAC complexes
    Sin3A-HDAC complex
     105277638
    BRAF-HDAC complex
     105277638
    REST complex
     105277638
    SHIP complex
     105277638
    MiDAC complex
     105277638
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     105277638
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    105277638
  Chromatin remodeling factors
   NuRD complex
    105277638
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 105277638
NCBI-ProteinID: XP_011334448
LinkDB
Position
7:complement(2348007..2351001)
AA seq 497 aa
MDPAKMAMLPHSRKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYR
PHKATADEMTKFHSDEYIRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAG
GSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDI
DVHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDMGAGKGKYYAVNIPLRDGMDDE
SYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKKYNLPF
LMVGGGGYTIRNVSRCWTYETSVALGCEIANELPYNDYFEYFGPDFKLHISPSNMANQNT
PEYLEKIKTRLFENLRMLPHAPGVQVQAIPEDGAVIEDSEAEEKINPDERLPQRDLDKRI
QHENEYSDSEDEGESGRRDNRSYKGSRKRPRLEKGQEAMDIDIKKEDDIKSEPKDNEKDE
KTNPTNEDSKKDSGANP
NT seq 1494 nt   +upstreamnt  +downstreamnt
atggatcccgcaaaaatggccatgctgcctcacagcaggaaacgcgtctgctactattac
gacagtgatatcggaaattattattatggccaaggacaccctatgaaaccacatcggata
cgaatgacacacaatttactcctaaattatggtctttataggaagatggaaatatatcgg
cctcataaagctacagcggatgaaatgacaaagttccatagcgacgagtacattagattc
ctgagatccataagaccagataacatgtcggagtacaataaacagatgcaacgattcaat
gtaggagaagattgcccggttttcgatggcttgtacgagttttgtcaattatcagccggt
gggtctgtagctgctgctgtaaagcttaacaagcaagcttcggaaatctgtatcaattgg
ggtggtggcttgcaccacgctaaaaaaagcgaagcatcaggattctgttacgtaaacgac
attgtactggggatcctggaattgttgaaatatcatcagagagttttatacattgatatc
gatgtccatcacggcgatggtgtagaagaagctttttatacgacagatcgagtgatgacc
gtctcgtttcacaagtatggcgaatacttccctggcactggagatctgcgggacatgggt
gcaggaaagggaaagtattatgctgttaacatacctttgagagatggtatggacgatgaa
agttacgagtcaatatttgtccccattatttcaaaagtgatggagactttccaaccctct
gctgttgtcttgcaatgtggtgctgattcattaacgggcgatcgtttgggttgcttcaac
ttgactgtaaggggtcacggaaaatgtgtggaatttgtgaaaaagtacaatttgcctttc
ttgatggttggtggtggtggatacacgattagaaacgtgtccagatgttggacgtacgag
acgtccgtagctctgggatgtgaaattgcaaatgaacttccatataacgattattttgaa
tatttcggtcctgattttaaactgcatatcagcccttcgaacatggcgaatcaaaatact
cccgaatatctcgagaaaataaaaacgagactgtttgaaaatctaagaatgctacctcat
gcacctggtgtacaagttcaggcaatcccagaggacggcgcggttatcgaagattcggaa
gccgaagagaagataaatccggacgaaagattgccgcagcgcgatttggataaaagaata
caacatgagaacgagtacagcgacagcgaagatgaaggagaaagtggacgaagggataat
agatcgtacaagggatcaagaaagcgaccacgtttagaaaaagggcaggaggctatggat
attgatataaagaaagaagacgatatcaagtccgagccaaaagataatgaaaaagacgag
aaaacgaatcctacaaatgaggactcgaagaaggacagtggggcgaatccctga

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