KEGG   Ooceraea biroi (clonal raider ant): 105277697
Entry
105277697         CDS       T05778                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1 isoform X1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
obo  Ooceraea biroi (clonal raider ant)
Brite
KEGG Orthology (KO) [BR:obo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:obo03041]
    105277697
Spliceosome [BR:obo03041]
 Complex B
  Other components
   Complex B specific factors
    105277697
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR36-Utp21_1st EIF3I WD40_Gbeta Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_RIG_2nd WDR90_beta-prop_4th LisH_TPL Beta-prop_ACSF4 NBCH_WD40 Beta-prop_Nup120_160 Beta-prop_VPS8 Beta-prop_TEP1_C Beta-prop_Aladin Ge1_WD40 WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214 Beta-prop_EIPR1 Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_WDR35_TULP_N Beta-prop_NWD2_C Beta-prop_WDR41 Beta-prop_IFT122_1st WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_SCAP Beta-prop_DCAF12 Beta-prop_IP5PC_F WD_LRWD1 PROPPIN WD40_like VPS8_N LisH_WDR26 DUF7165 LisH_PAC1 Beta-prop_LRRK2 zf_topless
Other DBs
NCBI-GeneID: 105277697
NCBI-ProteinID: XP_011334572
LinkDB
Position
7:complement(1516399..1518988)
AA seq 510 aa
MSIEIESADVIRLIQQYLKEANLVKTLQTLQEETGVSLNTVDSVDGFVADINNGHWDTVL
KAVQSLKLPDKKLIDLYEQVVLELIELRELGAARSLLRQTDPMIMMKQQEPERYIHLENL
LARSYFDSREAYPDGSTKEKRRAYIATALAGEVSVVPSSRLLALLGQALKWQQHQGLLPP
GTTIDLFRGKAAVRDQEDEKYPTQLSKQIKFGQKSHVECARFSPDGQYLVTGSVDGFIEV
WNFTTGKIRKDLKYQAQDNFMMMEQAVLSMSFSRDSEMLAGGGQDGKIKVWRVQNGQCLR
RFEKAHSKGVTCLQFSRDNSQILSTSFDTTIRIHGLKSGKTLKEFRGHSSFVNEVIFSPD
GHNVISASSDGTVKIWSLKTTECIGTYKSLGAADLTVNSIHSLPRNPEHFVVCNRSNTVV
IMNMQGQIVRSFSSGKREGGDFVCTVVSPRGEFIYCVGEDLVLYCFSTSSGKLERTLNIH
EKDVIGLAHHPHQNLLCSYSEDGLLKLWKP
NT seq 1533 nt   +upstreamnt  +downstreamnt
atgtcgattgaaattgaatctgccgacgtgatccggctgatacagcagtatctcaaggaa
gcgaatcttgtgaagaccctgcaaaccctacaggaagagacaggggtgtcgctgaatact
gtcgacagtgtagatggatttgtcgcagatataaacaatggacattgggacacagtctta
aaagcagtacagtcactgaagctacctgacaagaagcttatcgacttgtatgaacaggtt
gttctagaattaattgagctgcgtgagctgggtgcagcgcgttccttgttaaggcagact
gatcccatgattatgatgaagcaacaggagcctgagagatacatccatctagagaacctg
cttgcacgatcgtattttgactcgcgcgaggcgtatcccgatggaagcaccaaggaaaag
cggagagcgtacatagccaccgctctcgctggtgaggtgtcggtagtaccttccagcaga
ttgctcgccctactgggacaggcgttgaagtggcagcagcatcagggcttgctgccgccg
ggcaccacgatagatttattcaggggaaaagcagcggtgcgcgatcaggaggatgagaag
tatccgacgcagctgtcgaagcagatcaagttcggccagaagtcgcacgtggagtgcgcg
cgtttctcgccggacgggcagtacctggtgaccggctcggtagacggcttcatcgaggtg
tggaacttcacgaccggcaagatcaggaaggacttgaagtatcaggcgcaggacaacttt
atgatgatggagcaggcggtgctgtcgatgtcgttcagtcgcgacagcgagatgttggcg
ggcggtggccaggacggtaagatcaaggtctggagagtgcagaacggccagtgtttgagg
aggttcgagaaggcacactcgaagggcgtgacgtgtctgcagttcagcagggacaacagc
caaattttatcgacttcgtttgacactaccataagaatacacggcctgaaatccggaaag
actctcaaggagtttcgcggtcacagctcgttcgtgaacgaagtcattttctcgccggac
ggtcataatgtaatcagcgcgtcgtcggacggaacggtaaagatctggagcttgaagact
accgagtgcataggcacttataaatcactgggcgcggccgacttgacggtgaacagcata
cactcccttcctcgaaacccggagcacttcgtcgtgtgcaatcgctccaacacggtagta
attatgaatatgcagggccaaatagtcaggtcgttctcgagcggtaaacgagaggggggt
gacttcgtgtgcacggtagtgagcccacgtggcgaatttatttattgcgtcggtgaggat
ctcgtactgtactgcttctccacgtcctccggaaaacttgaaagaactctcaacattcac
gagaaagacgtgatcggcttggcgcaccatccccatcaaaatttgttgtgctcctacagc
gaggatggtcttttaaaactgtggaagccgtaa

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