Ooceraea biroi (clonal raider ant): 105278013
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Entry
105278013 CDS
T05778
Name
(RefSeq) neuronal PAS domain-containing protein 4
KO
K26457
neuronal PAS domain-containing protein 4
Organism
obo
Ooceraea biroi (clonal raider ant)
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
obo03000
]
105278013
Transcription factors [BR:
obo03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
105278013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
bHLH_NPAS4
PAS_3
PAS_9
PAS
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
105278013
NCBI-ProteinID:
XP_026829316
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All DBs
Position
11:13399104..13406175
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AA seq
721 aa
AA seq
DB search
MVVDDEEEMMVEEVEEEKKEEEEEEVVAMLVVVGEPASASPSTYASKSTKGASKLRRDLI
NAEIANLRDLLPLPPSTRQRLSQLQLMALVCVFLRKANYFQQALKNCPSESSNIPTPNIG
FSKAMSGFIMMMTQQGKLLYISENAADYLGHSMEDLLIHGDSVYDVIDKQDHMVVQTQLS
RNSPVPSDRRLFLCRINVSRNSRRQLRFGDQKVVLVEGHFLPFVPVCNRNEFVFLASCTP
VVLPETRESIVQGATNIFTTIHSMDMKYLHIDKTAESHLEYTRAELVNVSWYNLLHWDSI
RTAYCKHQTVIQSDQERSTTALLRLQSRSGRWFWVHCVLQVKDTSDECQHPIIVCTNQVL
TDKEAEVMRSSSWLYQYSSQAKFTYGLCPGGQGRGAVYPSTGSTGASQSQDYVRTYSHDV
NAQHSPSMGADRSETESHGSAKTAAQSMDYPGRRLLRDDAEPVDMSISGAEQHEGRNIYG
AIAGQQQQQQHVLDDSIRYHHKQYHKSSLHLAGYRAKFVQCHGAQYASGCADVLSVPAAK
YYHLTDLDRDYCCPERGGLLLHKRLPAKALIAPPPTVVGSTAEPAPPDTGTLTDSWGASP
AWSDALQRVPDVVHQELSPYITTPTTPVNTPDSDTLHSEAPIFNFDWAGTEQHVPNLKIT
FHRGGGGGVAAAVSSSSSSSSVTGHPTGQSRKQHQDTVQPITLQLPRRKGQSTENDGKDS
K
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggtggtggacgatgaagaggagatgatggtggaggaggtggaggaggagaaaaaggag
gaggaggaggaggaggtggtggcgatgttggtggtggtaggagaaccagcctccgccagt
ccatccacgtatgcgagcaagtctacgaaaggcgccagcaaacttcgaagggacctgata
aacgccgaaatcgcgaatctacgtgacttactgccgttgccgccctcgacacgccagagg
ctttcccagctgcaacttatggccttggtctgcgtgttcctgcgaaaagccaactacttt
cagcaagcgctgaaaaactgtccatccgaatcctcgaatattccaacacctaacatagga
ttctcaaaagcgatgtccggcttcatcatgatgatgacgcagcaagggaaattgttatac
atatcggaaaatgcggcggattatcttggacattccatggaagatttgctcattcacggc
gacagcgtgtacgacgtgattgacaagcaggatcacatggtcgtgcagacccaattatcc
aggaacagtcccgtccccagtgacagaagattgttcctctgtcgcatcaacgtgtcgagg
aattctcgcaggcaactacgatttggtgatcaaaaggtagtcctcgtagagggtcacttt
ttgccgttcgtcccggtctgcaatcgcaatgagttcgtcttcttggcctcgtgcactcca
gtggtcctgccggagaccagagagagcattgtccagggtgcaacgaacatcttcaccacg
attcactcgatggacatgaagtacctgcacatcgacaaaaccgcggaaagtcatctagag
tacactcgtgccgagctggtcaacgtatcctggtataatctacttcattgggactccata
aggacggcctattgcaagcatcagactgtcatccagtccgatcaggagcgctcgactacc
gctctgttgaggctacaaagccgctccgggaggtggttctgggtccactgcgtattgcag
gtcaaggacacttccgacgaatgccagcatcccatcatcgtttgcacgaatcaagtcctg
acagataaggaggcggaagtgatgcgctccagttcgtggctgtaccagtattcgtctcag
gcgaagttcacttacggactctgtcccgggggacaaggtcgcggcgccgtatatccctcc
acgggatctaccggcgccagccaaagccaggactacgtccgcacgtactcgcatgacgtc
aacgctcagcactcgccatcaatgggagcagaccggtctgagacggagtcgcatggatcc
gcgaagacggcagcgcaatcgatggactatcccggcaggcgactcctgcgggacgacgca
gagccggtggacatgtcgataagcggcgccgagcagcacgagggtagaaacatttacggt
gcgatcgctggtcagcagcagcagcagcaacacgtcctggacgattcgatcaggtaccat
cacaagcagtaccacaagagctcgctacacctggctggctatcgggccaagttcgtgcag
tgccatggcgcgcagtacgcgagcggatgtgcggacgtgttatcagtgcccgcggccaag
tattaccaccttaccgacctcgaccgggactactgctgcccggaacgcggcggtctgctg
ctgcacaagcggctgccggcgaaggctttgatcgcaccacccccaaccgtggttggttcg
acggcagaaccggcgccgccggacaccggcaccctgaccgacagttggggcgccagcccg
gcatggtcggacgcgctgcagagggtgcctgatgtagttcaccaggagctcagtccatac
atcaccacgccgaccacgccagtcaacacgcccgactcggacactctgcactcagaggcg
ccaattttcaacttcgactgggctggcaccgagcaacacgtgccgaatctgaaaattacc
tttcaccgcggcggcggtggtggcgtcgccgctgccgtttcctcttcctcctcctcctcc
tctgtcaccggacatccgactggccagtctaggaagcagcatcaggacacggtgcaacct
atcacgctacagttaccacgcaggaaggggcagtccacggagaacgacggcaaggactcg
aagtga
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