Ooceraea biroi (clonal raider ant): 105278150
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Entry
105278150 CDS
T05778
Name
(RefSeq) transcription initiation factor TFIID subunit 3 isoform X2
KO
K14650
transcription initiation factor TFIID subunit 3
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105278150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
obo03021
]
105278150
Transcription machinery [BR:
obo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
105278150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromo_TP
PHD
PHD_2
PHD_5
PHDvar_NSD
Motif
Other DBs
NCBI-GeneID:
105278150
NCBI-ProteinID:
XP_011335303
LinkDB
All DBs
Position
2:complement(16975654..16985021)
Genome browser
AA seq
992 aa
AA seq
DB search
MSAEYSRSVLKIVVAQICQTIGWHSINSTPLEFMVDLMQEYFLRIARVTHQYAEVLGRTD
ANLDDVGLAFQHMNIDIQELIEYVKNVDSVPCVVQVPQFPVRRENHLNFLKPGSREVVTR
PVHVHEHLPAMYPDTEEEYVRAEDKNESLVNGTTDVTSSSGTSSSNSNNTSPHRTSPQVV
FKRPGDPVSFESPIVKRAKVLEEGRPLREISSVMMTTSGFLSPAREGKLPEARTPHQVRS
DSPQPSSYPMVPPELKSDKKPKKVVRKNPEDRKLDKENKKKKGAKELFKPDKIDESKIKK
LVGMKELAKLKPLKPGGGKTQSTTLQELTGSRPSTPKIASPKTASPKALAGSPKAPKAAQ
PKAKADKVIDLTDSSPVADKKEETVDKLPSEPDKQKLNIFKKISKPREEKDKDKETLEPQ
RYKDLALDSRENSPELIIDIENTEKHASHRNDADAKGGREEKRTPDVHAQPDGDLADVQS
PSSDVYMFDDADISPPGTPSTPKTPELSVPTVAEQKRKKKEKSGKKKEPKVKNAKQCVSP
KKTKLANDTAELDILDRPKTPQAPEPPLPREPILPPTLPFPFFPSFPSAPGLIPHPLFHP
RFPLPLGRGGAGPHPAMPNVALPPRFLNPPVKPEEFTLPKVKSVEREKQPLVPAASVELT
ASSIPVENEKVDKEKVDNKLTKVFKPNKELTFMSKVPERMPPAGVAPPIMSAPVAPITLA
TPTVPAAQMPPAKNPKAEKTEKNDMKSKEHKKEKKDKLKKKKDKKEKHKEKGEKVKEKKE
KADKREKLEKLKEKKEKKEKKKEKDSNKKNMKEDKNPETLPKITLKLGTASPRPATPENA
PMKKITIKPLVKKPDEEAKREPSPELAKISALVTRPPKQKSAKVKAEPVPKKEDAKEDKE
NGRNMLPTTPTTTVDRGGRQVWICPACGSQDDGSPMIGCDDCDAWYHWVCVGMQVPPADD
EDWYCRFCIAKKQELLHDKKKKKRKKKVKVTA
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctgaatacagtcgaagcgttttaaagatagtggtcgctcagatatgtcagaca
attggatggcattctattaattctacgccactggagtttatggtagaccttatgcaagaa
tatttcttacgtatcgcaagggtcacgcatcaatacgcagaagttttgggcaggacggat
gcgaatcttgatgatgtaggactagcgttccaacacatgaacattgatatacaggaattg
atcgagtacgtaaagaatgtagactccgttccgtgcgtcgtgcaggtcccgcagttccct
gttcgccgtgagaatcacctaaattttttaaaaccgggtagtcgcgaggtcgttaccagg
ccagtgcatgtacacgaacatctaccagcgatgtatccggataccgaagaggaatacgta
cgtgcagaggacaagaacgagagtttagtcaacggtacgacggatgtgacatccagcagc
ggcacatcgtcgagcaactcgaacaacacgtcgcctcacagaacgtcaccgcaggtggtt
ttcaaacgacccggcgacccggtgtcttttgagagtcccatagtgaagcgagcgaaggtc
ctggaggagggcagacccttacgcgagataagcagcgttatgatgactacctccggtttt
ttatcacccgcgcgcgaaggaaagctacctgaggcgaggacgccgcaccaagtgcggtcg
gattcaccgcagccgagctcctatccgatggtgccgcccgagctcaagtccgacaagaag
ccgaagaaggtcgtgaggaagaatccggaggaccggaagctcgacaaggagaacaagaag
aagaagggcgcgaaggagctgttcaagccggacaagattgacgagagcaagatcaagaaa
ctggtcggcatgaaggagctggccaagctgaagccgctgaagcccggcggcgggaagacg
cagtccacgaccctgcaggagctgacgggtagccggccgtccacgccgaagatcgcgtcg
ccgaagaccgcgtcgccgaaggcgctcgccggcagtccgaaggcgccgaaagccgcccag
ccgaaggccaaggctgacaaggtcatcgatctgacggacagctcccccgtcgccgacaag
aaggaggagaccgtcgacaagctgccgtcggagccggataagcagaaattgaatatattc
aagaagatctcgaagccgcgcgaggagaaggacaaggacaaggagacgttggagccgcag
aggtacaaggacctggccctcgactcgcgcgagaactcgccggaattgatcatcgacatc
gagaacacggagaagcacgcgtcgcatcgcaacgacgcggacgcgaagggcggacgcgaa
gagaagaggacgccggacgtgcacgcgcaaccggacggcgatctggcggacgtgcagagt
ccgtcctcggatgtctacatgttcgacgacgcggacatttcgccgccgggtacgcctagt
acgccgaaaacgcccgagctgagcgtgcccaccgttgcggaacagaagcggaagaagaaa
gagaagagtggtaagaagaaggagccgaaagtgaagaatgcgaaacagtgcgtcagtcca
aagaagacaaagctcgcgaacgacacggcggaattggacatactggatcgaccgaaaaca
ccccaggcacccgagccgccattaccccgagagcccattctcccacccacgctcccgttt
cccttctttccctcattcccctcggctcccggtttaataccccatccgctgttccatccg
cgatttcctctgcctctcggccgcggtggagcaggtccgcatccggcgatgcctaatgta
gcactgccgccacgttttctcaatcctcccgtgaaacccgaggagtttacgttacctaag
gttaaatcggtggaacgcgagaagcagccgttggtaccggcggcgtcggtggagttgaca
gcctcgtcgatcccggtcgagaatgaaaaggtcgacaaagaaaaggtggataacaaactt
acaaaggtgttcaaaccgaataaggaattgactttcatgtcaaaagtacctgagagaatg
ccgcccgcaggcgtcgcaccacctataatgtctgcacctgtcgcaccaatcacgcttgct
acaccaacagtccccgctgcgcaaatgccaccagccaaaaatcctaaagctgaaaaaacc
gagaagaatgatatgaaatccaaggagcataaaaaggagaagaaggataaattgaagaag
aagaaggataagaaagaaaagcacaaagaaaaaggcgagaaagtgaaggagaagaaggaa
aaggctgacaaacgcgagaaattggaaaagcttaaggagaagaaagagaagaaggaaaag
aagaaggaaaaagattcgaataagaaaaatatgaaggaggataaaaatccagaaactctc
ccaaaaattacgttaaaattaggtacagcttctcctagaccggcaacgcctgaaaacgct
cctatgaaaaaaataacgattaaaccactcgtgaaaaaacccgacgaggaggctaagcgg
gaacctagtccagagttggcgaaaatatcggcactggtaacacgaccgccaaagcaaaag
tcagcaaaggtgaaagcagagccagttcctaaaaaggaagatgctaaagaagacaaagaa
aatggcaggaacatgttgcctacaacaccaaccactactgtggatcgtggcggtcgtcaa
gtgtggatatgccccgcgtgcggcagccaggatgatggctcgccgatgattggctgtgat
gattgcgatgcgtggtatcactgggtgtgcgtcggtatgcaggtcccaccagctgacgac
gaggactggtactgtcgcttttgcatagcgaagaagcaggagctgctccacgacaagaag
aagaagaagcggaagaagaaggtgaaagtaacggcctag
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