Ooceraea biroi (clonal raider ant): 105278172
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Entry
105278172 CDS
T05778
Name
(RefSeq) nucleolysin TIAR isoform X2
KO
K13201
nucleolysin TIA-1/TIAR
Organism
obo
Ooceraea biroi (clonal raider ant)
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obo03019
]
105278172
03041 Spliceosome [BR:
obo03041
]
105278172
Messenger RNA biogenesis [BR:
obo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
105278172
Spliceosome [BR:
obo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
105278172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_3
DUF4523
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
105278172
NCBI-ProteinID:
XP_011335331
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Position
2:complement(17034983..17474658)
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AA seq
447 aa
AA seq
DB search
MLFVPFTVPTFPATHHQTTHPAHQSHHQQLQANNQNPVQQPQQLTQLNQLSHLNHQGIVP
ATTNQPIHSTSCSPQQQATTPNKEMKVNWATSPGNQPKQDTSKHYHIFVGDLSPEIETHT
LREAFSAFGEISDCRVVRDPQTLKSKGYGFVSFVKKAEAESAIGNMNGQWLGGRSIRTNW
ATRKPPAPKSEVNAKPLTFDEVYNQSSPTNCTVYCGGLTNGLTEELMQKTFSPFGSIQEI
RVFKDKGYAFIRFSTKESATHAIVAVHNTDINGQTVKCSWGKESGDPNNAQQTGQALSSA
TYPYYAAAAAAAAAAAGVAGVGGVGGVGSAGQLGYWYPPQSYPTTATQMQAGGFLQGMQG
YTYGQFAGYQQAQYMGMGMGAVHAAGTAAGWGQGLPGGPQLPPHHATTVTAPPGVQAAPP
PPPPPAQMMAYPMQQFQCVLGCGPASG
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgctgttcgtcccgttcacggtacccaccttccctgcgacgcatcatcagacgactcac
cctgcgcatcagtcgcatcatcaacagctgcaggccaacaaccagaatccggtgcagcag
ccgcagcagcttacccagctgaatcagctgagccatctgaatcatcagggcatcgtgccg
gcaacgaccaaccagcctatacacagcaccagctgttcgccgcagcaacaagcaacgaca
ccgaacaaggagatgaaagttaactgggcgacgtcgccgggtaaccaaccaaaacaagac
acaagcaaacactatcacatattcgttggggacttgagcccggaaatcgagacacacacc
ttgagggaagcattctcagccttcggggagatctcggattgcagagtcgtcagagatcct
caaaccttaaaatccaagggatatggattcgtttcgttcgtcaaaaaagcggaagcagag
agtgccattggtaacatgaatgggcaatggctcggtggcagaagtattcggacaaattgg
gccactcgcaaacctcccgcacctaaatccgaagtaaacgcaaagccgctgacgttcgac
gaagtttacaatcaaagtagtccgaccaactgcacggtgtactgcggcggattgaccaat
ggtttaacagaagaactcatgcagaagactttctcacccttcggatccatccaagaaatt
cgagtatttaaggacaaaggctatgccttcatcaggttttctaccaaggagtcggccacg
cacgccattgtagcggtacacaacacagacatcaacggccaaacggtgaagtgcagttgg
ggcaaggagagtggagatcctaataatgcccaacaaactggacaggcgttatcgtcggcg
acgtatccttactacgcggcggcggcagctgccgccgcggcggcggcgggcgtcgcgggt
gtcggaggcgtcggtggcgtcggcagtgccggacaactcggatactggtatccgccccaa
tcttatcccacgacagcgacacaaatgcaagctggtggctttcttcagggcatgcaagga
tacacctatggacagttcgccggatatcaacaggcgcaatatatgggaatgggcatgggt
gctgtccacgctgctggcacagcggcaggatggggtcagggattacctgggggaccacag
ttaccaccacaccacgccacgacggtcacggcacccccaggggtgcaagccgcacccccg
ccaccaccgccgccggcgcaaatgatggcctacccgatgcaacagttccagtgtgttctt
ggttgcggtccagctagcggatga
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