Ooceraea biroi (clonal raider ant): 105278282
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Entry
105278282 CDS
T05778
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03030
DNA replication
obo03410
Base excision repair
obo03420
Nucleotide excision repair
obo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105278282
03410 Base excision repair
105278282
03420 Nucleotide excision repair
105278282
03430 Mismatch repair
105278282
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
obo03032
]
105278282
03036 Chromosome and associated proteins [BR:
obo03036
]
105278282
03400 DNA repair and recombination proteins [BR:
obo03400
]
105278282
DNA replication proteins [BR:
obo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
105278282
DNA Replication Termination Factors
ELG1-RFC complex
105278282
Chromosome and associated proteins [BR:
obo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
105278282
DNA repair and recombination proteins [BR:
obo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
105278282
Check point factors
HRAD17(Rad24)-RFC complex
105278282
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_14
AAA_22
AAA_16
Rad17
Mg_chelatase
Viral_helicase1
AAA_11
AAA_assoc_2
AAA_24
AAA_19
nSTAND3
RuvB_N
AAA_18
DEAD
MeaB
ABC_tran
AAA_5
DNAX_ATPase_lid
NTPase_1
IstB_IS21
SNF2-rel_dom
AAA_28
RNA_helicase
MipZ
AAA_29
SRP54
ATPase_2
FtsK_SpoIIIE
AAA_25
AAA_30
Motif
Other DBs
NCBI-GeneID:
105278282
NCBI-ProteinID:
XP_011335569
LinkDB
All DBs
Position
10:complement(3800673..3802447)
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AA seq
352 aa
AA seq
DB search
MAGDSNADEQMEIESLPSTSNGGDTRIREKDAKAANLPWIEKYRPQVFSDIVGNEDTVSR
LAVFAQHGNTPNIIIAGPPGVGKTTTILCLAHLLLGPAFKEAVLELNASNERGIDVVRNK
IKMFAQKKVNLPKGKHKIIILDEADSMTDGAQQALRRTIEMYSHTTRFALACNNTEEIIE
PIQSRCAMLRYGKLTDAQILAKVLEVCEKENISYTDDGMEAIVFTAQGDMRQALNNLQST
YNGFNHVNGENVFKVCDEPHPLIVKEMLDDCINGDISKACTVMDHFWKMGYSAEDIISNV
FKVCKNHTMDEKLKLMFGKEIGITHMGIVEGINSLLQLHALVARLCRACTST
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggcaggggacagcaacgcggatgagcagatggaaattgaaagtttgccgtccacgagc
aacggcggtgacacgagaattagagaaaaagatgccaaagctgccaatttaccatggatt
gaaaagtatcgaccacaagtgttttcggatatcgttggcaatgaggacaccgtgtctaga
ttggctgtcttcgcgcaacatggaaataccccaaatatcattattgccggcccaccagga
gttggcaagaccacaacaattttatgtctcgcgcatttactactaggaccggcgtttaag
gaggctgtactcgagttaaatgcatcgaatgaacgaggaatagacgtagttagaaacaaa
ataaaaatgtttgcccagaagaaggtgaatcttccaaaggggaagcataaaatcattatt
ttggatgaggcggatagtatgactgacggtgcacagcaagcgctgcgtcgaacgatagag
atgtacagccatacgaccagattcgctcttgcgtgtaacaacacagaagaaattatcgag
cctatacagtcacgatgtgctatgttgagatatggaaaactaacagatgctcagatcctg
gcgaaagttctggaagtctgcgaaaaggaaaatatttcttacacggacgacggtatggaa
gcaatagtgttcactgcccaaggagacatgaggcaagctttgaacaacttgcagtctacg
tacaacgggttcaatcacgtgaacggcgagaatgtatttaaagtttgtgacgaacctcat
ccgttgattgtcaaagagatgctggatgattgcataaacggagacatctccaaagcctgc
acggtgatggaccatttctggaaaatgggatactccgcggaagacataatcagcaatgta
ttcaaggtctgcaaaaatcacacgatggatgagaaactgaagttgatgtttggcaaggaa
attggaataacgcacatgggaatagtggagggcatcaacagtctattgcaactgcacgct
ttagtggcacgactttgtcgcgcgtgtacctcaacatag
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