KEGG   Ooceraea biroi (clonal raider ant): 105278282
Entry
105278282         CDS       T05778                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
obo  Ooceraea biroi (clonal raider ant)
Pathway
obo03030  DNA replication
obo03410  Base excision repair
obo03420  Nucleotide excision repair
obo03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:obo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    105278282
   03410 Base excision repair
    105278282
   03420 Nucleotide excision repair
    105278282
   03430 Mismatch repair
    105278282
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:obo03032]
    105278282
   03036 Chromosome and associated proteins [BR:obo03036]
    105278282
   03400 DNA repair and recombination proteins [BR:obo03400]
    105278282
DNA replication proteins [BR:obo03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    105278282
  DNA Replication Termination Factors
   ELG1-RFC complex
    105278282
Chromosome and associated proteins [BR:obo03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    105278282
DNA repair and recombination proteins [BR:obo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     105278282
  Check point factors
   HRAD17(Rad24)-RFC complex
    105278282
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid AAA_14 AAA_22 AAA_16 Rad17 Mg_chelatase Viral_helicase1 AAA_11 AAA_assoc_2 AAA_24 AAA_19 nSTAND3 RuvB_N AAA_18 DEAD MeaB ABC_tran AAA_5 DNAX_ATPase_lid NTPase_1 IstB_IS21 SNF2-rel_dom AAA_28 RNA_helicase MipZ AAA_29 SRP54 ATPase_2 FtsK_SpoIIIE AAA_25 AAA_30
Other DBs
NCBI-GeneID: 105278282
NCBI-ProteinID: XP_011335569
LinkDB
Position
10:complement(3800673..3802447)
AA seq 352 aa
MAGDSNADEQMEIESLPSTSNGGDTRIREKDAKAANLPWIEKYRPQVFSDIVGNEDTVSR
LAVFAQHGNTPNIIIAGPPGVGKTTTILCLAHLLLGPAFKEAVLELNASNERGIDVVRNK
IKMFAQKKVNLPKGKHKIIILDEADSMTDGAQQALRRTIEMYSHTTRFALACNNTEEIIE
PIQSRCAMLRYGKLTDAQILAKVLEVCEKENISYTDDGMEAIVFTAQGDMRQALNNLQST
YNGFNHVNGENVFKVCDEPHPLIVKEMLDDCINGDISKACTVMDHFWKMGYSAEDIISNV
FKVCKNHTMDEKLKLMFGKEIGITHMGIVEGINSLLQLHALVARLCRACTST
NT seq 1059 nt   +upstreamnt  +downstreamnt
atggcaggggacagcaacgcggatgagcagatggaaattgaaagtttgccgtccacgagc
aacggcggtgacacgagaattagagaaaaagatgccaaagctgccaatttaccatggatt
gaaaagtatcgaccacaagtgttttcggatatcgttggcaatgaggacaccgtgtctaga
ttggctgtcttcgcgcaacatggaaataccccaaatatcattattgccggcccaccagga
gttggcaagaccacaacaattttatgtctcgcgcatttactactaggaccggcgtttaag
gaggctgtactcgagttaaatgcatcgaatgaacgaggaatagacgtagttagaaacaaa
ataaaaatgtttgcccagaagaaggtgaatcttccaaaggggaagcataaaatcattatt
ttggatgaggcggatagtatgactgacggtgcacagcaagcgctgcgtcgaacgatagag
atgtacagccatacgaccagattcgctcttgcgtgtaacaacacagaagaaattatcgag
cctatacagtcacgatgtgctatgttgagatatggaaaactaacagatgctcagatcctg
gcgaaagttctggaagtctgcgaaaaggaaaatatttcttacacggacgacggtatggaa
gcaatagtgttcactgcccaaggagacatgaggcaagctttgaacaacttgcagtctacg
tacaacgggttcaatcacgtgaacggcgagaatgtatttaaagtttgtgacgaacctcat
ccgttgattgtcaaagagatgctggatgattgcataaacggagacatctccaaagcctgc
acggtgatggaccatttctggaaaatgggatactccgcggaagacataatcagcaatgta
ttcaaggtctgcaaaaatcacacgatggatgagaaactgaagttgatgtttggcaaggaa
attggaataacgcacatgggaatagtggagggcatcaacagtctattgcaactgcacgct
ttagtggcacgactttgtcgcgcgtgtacctcaacatag

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