Ooceraea biroi (clonal raider ant): 105278396
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Entry
105278396 CDS
T05778
Name
(RefSeq) elongator complex protein 2
KO
K11374
elongator complex protein 2
Organism
obo
Ooceraea biroi (clonal raider ant)
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
obo03016
]
105278396
Transfer RNA biogenesis [BR:
obo03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
105278396
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_IFT122_1st
ANAPC4_WD40
EIF3I
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
WD40_RFWD3
WD40_Gbeta
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_Aladin
Beta-prop_EIPR1
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
105278396
NCBI-ProteinID:
XP_011335747
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Position
10:2647513..2650524
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AA seq
789 aa
AA seq
DB search
MTTRYISSACNTYPHCVDWGNNGLICFGACNAVAIYEPCTHIGRVTHTLHRHRDHVKSVR
WIRPGDGGPESEFLSSSADGRVIIWSKNGTDDTFRDTTTVDMGSNVYFADCLQLSDVALA
TSNFPQLLICAGSLDSEIKVWLREEDGSVKTVQSIFFQPNLIIHGRLAYLPTTKRPLLAV
ALSDCSILLYTRDSDVPESNFVKVQCLTGHKNWVQSMEFAYNDDGNSLLATGSQDRTIRL
WKIGKAVAKEPSDLFQPKRYIFTVDGEEYDISLESILYGHEDRIYGVHWQPVKAEDDKDG
QTMRLLSSSTDKSMVIWEPDESTGIWVEKVRVGNVGGNSLGFYGCKFGPDGLHILGHGQH
EGSFHIWRYSQEIANWIPRSAPSGHCSKVVDLCWEPKGRFLLTASTDQSTRIYAPWKNDS
QELWHEIARPQLHGYDMACLVTLAPYMYASGAEEKVVRIFKATSAFRDRLRLLASVDDFE
ITMAHGATVPSLGLMNKATLDEEVDQCKSEEENSTSGTYEPPVEDELAQSTLWPELQKLY
GHGYEIFCMAARHDGQLLATACRSTSEEHSAILLWSTDTWSQVQRLVSHQLTVTQLAFSP
NDKYLLSVSRDRRWSLFREESGDYALITASSRKNNPHSRIIWCCGWTEDSSYFATGSRDG
KVCAWSAKKIEASPETLVPEATLDTQGQSVTALCFAPSRATQRPSYILAIGYDTGRIAIQ
MVTMNVENAWLKLIEYDTSQAHHSTVKRLVFRPSEEHSSNILQLASCGCDHAVKIHDIDA
SSLTTPIKT
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgacgactcgttacatctcctccgcatgcaacacctatccgcactgcgttgactggggc
aacaacggcctgatctgtttcggagcgtgcaacgcggtcgcgatatacgagccgtgcacg
cacatcggtcgcgtcacgcacacgctgcaccggcatcgcgatcacgtcaagtcggtgcga
tggatcaggccgggagacggcgggccggaatcggaattcctgtcaagttccgcggacggc
agggtgatcatttggagcaagaacggcaccgatgacacttttcgggataccacgacggtg
gacatgggaagcaacgtctacttcgccgactgcctccaattgtctgacgttgcacttgcc
acatcgaatttcccacaactactgatttgtgcaggttcgctcgacagtgagataaaagtg
tggttgagagaggaggacggaagcgtcaaaaccgttcagagtatcttcttccagcctaat
ctgattatacacggtcgcctggcatacctgccgaccaccaaacgtcccctcttggctgtg
gcattaagcgattgttccattttgctgtacaccagagattcggatgtaccagaatcgaat
ttcgtaaaggtccagtgcttgactggacacaaaaattgggtacaatccatggagtttgcg
tacaatgacgatgggaatagccttctcgcaacaggctcacaggacaggacgataagattg
tggaagattggcaaagctgttgcgaaagagcccagtgacttgtttcagccgaaacgatac
atctttacagtggacggtgaggagtacgacattagcttggaatccattctttacggtcac
gaggaccggatatatggagtgcattggcagcctgtaaaggcagaagacgataaagatgga
caaactatgagattactgtcctcgtcgacggacaagtctatggttatatgggagccagat
gaatctactggaatttgggtagaaaaagtacgtgttggaaacgttggtggcaattctctt
ggcttctacggttgcaaatttggcccagatggcttgcacatactgggacacggtcagcac
gaaggcagttttcacatatggagatattcacaagaaattgcaaattggatcccacgatct
gcgcctagcggtcactgttcaaaggtagtcgacttgtgctgggagccaaaaggaagattc
ctcctcacagctagtaccgatcaaagcacgagaatttatgcgccgtggaagaacgactct
caggaattgtggcacgaaatagcacgtcctcagctacacggatacgacatggcgtgtcta
gttacgttagcaccgtacatgtacgcttccggagcggaggagaaggtcgtacgcattttt
aaggccacatcggcgttcagggatcgtttgaggctgctagcgagtgtcgacgacttcgag
atcacaatggcccatggtgctactgtaccctcgctcggattaatgaataaggcaacattg
gatgaagaagtcgatcagtgcaagagcgaagaggaaaattcgacgagcggcacgtacgaa
ccaccggtggaggacgaactagcacaaagtacactctggccagagttgcagaagctctac
ggacacggctacgagatattctgcatggcggcgaggcacgacggacagctgctggccaca
gcgtgcaggtcaactagcgaggagcactcggcgatattattatggagcaccgacacgtgg
tcgcaggtccagcgactggtttctcatcaattaactgtaacgcaacttgcgttctccccg
aacgacaagtatctcttatccgtttccagagacaggaggtggtcgttattcagagaagag
agtggtgattacgcgttaatcaccgccagctcgaggaagaacaatccgcactcgagaata
atttggtgttgcggctggacggaggattcgagttacttcgcgactggctcgagagacggc
aaagtttgcgcgtggtccgctaagaagatagaggccagccctgaaacccttgtaccagag
gcgacgctggacacgcaaggccaatcggttacagcgttgtgtttcgcaccgagccgcgcc
acgcaacgaccttcctacattctggcgattggatacgatacgggtcgtatcgcgatccag
atggttacgatgaacgtggagaacgcgtggttgaagttgatcgagtacgacacttcgcag
gcacatcactcgaccgtgaagagactcgtgtttcgaccgagtgaagaacattcatccaat
atattgcaattggcaagctgtggctgcgatcatgctgttaaaatacacgatatagatgcg
tcgtcgttaaccacgccaataaaaacgtga
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