Ooceraea biroi (clonal raider ant): 105278433
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Entry
105278433 CDS
T05778
Name
(RefSeq) ATP-dependent RNA helicase dbp2 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105278433
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
obo03041
]
105278433
03009 Ribosome biogenesis [BR:
obo03009
]
105278433
Enzymes [BR:
obo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105278433
Spliceosome [BR:
obo03041
]
Complex A
U1 snRNP components
U1 related factors
105278433
Complex B
105278433
Ribosome biogenesis [BR:
obo03009
]
Eukaryotic type
Pre-60S particles
Helicases
105278433
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Cas3-like_C_2
PRAI
Motif
Other DBs
NCBI-GeneID:
105278433
NCBI-ProteinID:
XP_026824724
LinkDB
All DBs
Position
4:13090908..13098861
Genome browser
AA seq
606 aa
AA seq
DB search
MAYGDRDRGDRRGGGGSRGGGRFGGRDGGGGGGSRFSSGGNRDSGFGSNSFKNRQPGERL
RKPRWDMSTLPPFRKDFYQPHPNVMARSVHAVEAYRSNKEITVKGTNVPGPNIYFEEGGF
PDYVLNEIRRQGFGEPTAIQAQGWPIALSGRDMVGIAQTGSGKTLAYILPAIVHINHQPR
LSRNDGPIALILAPTRELAQQIQQVASDFGMSSQVRNTCIFGGAPKGPQARDLERGVEIC
IATPGRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSAT
WPKEVRNLAEEFLTDYIQINIGSLQLAANHNILQIVDVCEEYEKESKLMKLLEEISNEPE
NKTIIFVETKRKVDDITRAINRYGWQAIGIHGDKSQQERDYVLNQFRNSRSAILVATDVA
ARGLDVEDVKFVINLDYPSNSEDYVHRIGRTGRSQRTGTAYAFFTPANAHKANDLIQVLE
EAKQVVNPKLYELSRNPGVYKRGRYGGRSGGGGGRGSGGRGGSRGSRGGRDAGDRGRFDR
SSGGANDRTSKWTGNGTSGLGGTNYGGSKSFPQNSFGGGTIGGGSGNYSQNNGGYGGGSY
RQQNGY
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggcatacggcgatcgcgatcgtggtgacagaagaggaggcggcggctcgcgcggcggt
ggtcgcttcggcgggcgagatggcgggggaggtggtggcagcaggttcagcagcggcgga
aaccgcgatagcggcttcggcagcaacagtttcaagaatcggcagcccggcgaacgtctg
cgcaaaccgcgatgggacatgagcacgttgccgccgttcagaaaagatttctatcagccg
catccgaatgtaatggcgcgcagtgttcatgccgtagaggcatatcgttcgaataaagag
atcaccgtgaaggggactaacgttccagggcccaatatctatttcgaagagggcggcttc
ccggactacgttctcaacgagatccgccgccaaggcttcggcgagccgaccgccatccaa
gcgcagggttggccgatcgcgttgtctggtcgcgacatggtcggcatcgcgcagacaggt
tccgggaagacgctagcgtacatcctgcccgcgatcgtgcacataaatcatcagcctaga
ttgagcagaaatgacgggccgattgccctgatcctggcgccaaccagagaactggcacag
cagatccagcaggtggcatcggacttcggcatgtcgtcgcaagtacgaaacacatgcatc
ttcggtggcgcgccgaaggggccgcaggcgcgcgacctcgagcgcggcgtcgagatctgc
attgccacgccgggccgcctaatcgacttcctcgagcgcggcaccacaaatctacgtaga
tgtacgtacctggtactggacgaggccgacagaatgctcgacatgggcttcgagccgcaa
attaggaaaattgtagagcaaatacgaccagaccgccagaccctcatgtggtcggcgacg
tggccgaaggaagtgcgtaatctcgcggaggagttcttaacggactacatacagatcaat
attggctccctgcaactagccgcgaatcataatattttacaaatcgtcgatgtgtgcgag
gagtacgaaaaggagagtaaactcatgaaactgctggaagagatctcaaacgagccggaa
aataaaactattatattcgtggaaactaagaggaaagtggatgatataacgagagctatt
aatagatatggatggcaagcgattggcattcacggagacaaaagccaacaagaaagagat
tacgtattaaaccagttccggaatagcagatccgccatcctagtggctaccgatgtcgcg
gcgagaggtttagatgtcgaggatgtcaaatttgtgataaacttggactatccgtccaac
tctgaggactatgtacaccgtatcgggcgtacgggtcgctcgcaacgtacaggaaccgcg
tacgcttttttcacgcccgccaatgcacacaaggctaatgacttgatccaagtcctggaa
gaggctaagcaagttgtcaatccaaaattgtacgagctgtctaggaatcctggcgtctat
aagagaggacgctacggtggacgcagcggaggtggtggtggtcgaggatccggaggtcgt
ggtggctcacgaggctcccgcggtggtcgcgatgcgggagacagaggaagattcgaccgt
tcgtccggcggcgcgaatgatcgcaccagcaaatggaccggaaacggtaccagtggcctg
ggcggcactaattatggcggcagcaaatcgttcccgcagaacagctttggcggaggcact
atcggcggtggttctggcaactacagtcagaataacggcggatacggcggaggcagttac
aggcaacaaaacggctattga
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