Ooceraea biroi (clonal raider ant): 105278465
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Entry
105278465 CDS
T05778
Name
(RefSeq) ATP-dependent RNA helicase dbp2 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105278465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
obo03041
]
105278465
03009 Ribosome biogenesis [BR:
obo03009
]
105278465
Enzymes [BR:
obo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105278465
Spliceosome [BR:
obo03041
]
Complex A
U1 snRNP components
U1 related factors
105278465
Complex B
105278465
Ribosome biogenesis [BR:
obo03009
]
Eukaryotic type
Pre-60S particles
Helicases
105278465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
105278465
NCBI-ProteinID:
XP_011335881
LinkDB
All DBs
Position
4:13084158..13090812
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AA seq
616 aa
AA seq
DB search
MFSRDRDQSRNHRGSVVRASSAIRGGTDNARGQIASRFATQSRGSASNVRVGLKGKQPGG
ALRKVNWDLRMLEPIRKDFYIEHPSVRNRSNEEVSQFRESAEITVKGDNVPNPIQFFEEG
NFPPYVMEGIRRQGYSQPTPIQAQGWPIALSGRDLVAIAQTGSGKTLGYILPAIVHIIHQ
PHLSSGDGPIVLILAPTRELAQQIQEVANCFGESAAVRNSCIFGGAPKGPQAHDLERGIE
ICIATPGRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWS
ATWPKEVRALAEDFLTDYAHLNIGSLTLSANHNITQIIDVCQEYEKDSKLCRLLQEIGTE
KENKTIIFVETKRKVDDITRNIRRDGWQAVSIHGDKNQQERDHVLQEFRSGRAPILVATD
VAARGLDVDDVKYVINFDYPSSSEDYIHRIGRTGRRRQTGTAYAFFTSHNMKHAGDLIEV
LREAGQNVNPRLSEMAEMAKAGNFGRNGKRFGSSIGGGVERGIGRRTTNDSRGRGGGSIR
GRGLPRGGSSFQASSNIYSGSGDYTNYSTVKPNTSLGQNTVYGYSTQKNYGQSAAPQNYG
GGDNYGNGYSYRGATY
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgtttagccgtgaccgagatcagagtaggaatcatcgtggcagcgttgtcagagcaagt
tctgctatcagaggaggcactgacaatgcacgtggacagatagctagccgttttgccaca
cagagtagaggaagcgctagtaacgtacgagtcggactaaaggggaaacagcccggaggc
gccctaaggaaagtcaactgggatctccgcatgttggaaccaatacgcaaggacttttac
attgagcatccatcggttagaaacagatctaatgaagaagtgagccaatttcgagagagt
gcagagataactgtaaagggtgataatgttcctaatcctatacagttttttgaagaggga
aactttccaccctacgtaatggagggcattcgtagacagggatactcgcagcccactcct
attcaagcgcaaggatggcctattgcccttagcggcagagatcttgtcgcgattgctcag
acgggctccggcaagacacttggatatatcttgcctgcaatcgtgcatatcatacatcaa
ccgcatctgagcagtggagacggaccaattgtcctgatactagctccaaccagagaatta
gctcagcagattcaagaggtggccaattgcttcggggagtccgcggctgtaaggaactcg
tgtatcttcggtggcgctccgaagggaccgcaggcgcacgatctggagagaggcattgag
atatgcattgccacgccaggtagactcattgatttcctggaaagagggaccacgaattta
cgtaggtgtacgtacttggtgctcgacgaagccgatcgaatgttagacatgggattcgag
ccacaaatacgaaagataatcgagcagatacgtcccgatcggcaagtgctgatgtggtcg
gcgacgtggcctaaggaagtccgcgcgctcgcggaggactttttaacggattacgctcac
ctgaacatcggctccctgactctgtcggccaatcacaacatcacgcagatcatcgatgtc
tgccaagagtacgagaaggactcgaagctgtgcaggctgctgcaagagatcggcaccgag
aaggagaacaagaccatcatattcgtggagacgaagcgtaaggtggacgacatcacgagg
aatatcaggcgcgacgggtggcaagccgtgagtatccacggtgacaagaatcagcaggag
cgggatcacgtgttacaggagttccgcagcggaagggcgccgattctagtcgcgaccgac
gtggctgccagaggcctggatgtggatgatgtgaagtacgtaataaatttcgattatcca
tcttcgtcggaggactacatacatagaatcggtcgaaccggacgcagacggcaaaccgga
acggcgtacgcgttcttcacgagccacaacatgaagcacgccggcgacctgatcgaagta
ttacgagaggccgggcaaaacgttaatccgcgcctcagcgagatggcagagatggccaag
gcgggcaacttcggaagaaatgggaaacgtttcggttcttccattggcggtggtgtcgag
agaggtatcggtcggagaaccaccaacgacagtcggggaagaggaggtggttcgataaga
ggaagaggtctccctcgtggcggaagttcttttcaggcttcctcgaatatttactcaggg
tcaggggattacactaattacagtactgtaaaaccgaatacttccttgggccagaacaca
gtgtacggatacagcacgcagaagaattacgggcaaagtgctgcgccccagaattacgga
ggtggtgacaattatggaaacgggtattcgtatagaggcgcgacttattaa
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