KEGG   Ooceraea biroi (clonal raider ant): 105278492
Entry
105278492         CDS       T05778                                 
Name
(RefSeq) DNA repair endonuclease XPF
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
obo  Ooceraea biroi (clonal raider ant)
Pathway
obo03420  Nucleotide excision repair
obo03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:obo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    105278492
   03460 Fanconi anemia pathway
    105278492
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:obo03032]
    105278492
   03400 DNA repair and recombination proteins [BR:obo03400]
    105278492
DNA replication proteins [BR:obo03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    105278492
DNA repair and recombination proteins [BR:obo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     105278492
SSDB
Motif
Pfam: UPF0669 ERCC4 SAM_KSR1
Other DBs
NCBI-GeneID: 105278492
NCBI-ProteinID: XP_019886917
LinkDB
Position
1:21829435..21834396
AA seq 1020 aa
MRCTMKTILFIIGTLLTCALALEEELLHYVSDDVPGGSYKYYSLTYDGYIKIRLTSITGD
ADLYASQTTTKPTYEPDHYCLQSTTCGEDIIFIPKSFKRPVSIGVYGHPSHEISKYTLSV
FEVTVEDDNFPYHQTSRSKLSAIMLEYENQIFLDILHEDGLVITAKGLGIEIVFGNVLKA
YSDPGNLVIVLGTTDYDERYFIDLLKSYGTNMLPRVVNAECPSNEREVMYLEGGVLFISG
RILVVDLLKNRVPLHLVTGVLVYRAHNILNAYQEAFALRLYRQSNKTGFIKAFTNSSLAF
TVGFSRVERVMKALFVKKLYLWPRFHSIVNSCLSKHMPEVIELHVKITPKMENIQTALLD
IMNYIVKELKRLNKYLDLDELTVENAIAKKFHKQLHLQLDPIWHQLSTTTKQLFSDLKTL
RSLVMSLTYQDSVSFYCMLNSLRTMEYAVKASGWIMLDEAENLFKYAKSRVYTDKSELKP
EPNPKWIALSEVLNEIQEQKRKKDDDSIDKVFILVQDNNVCHQLKNYLTMGANEYLLYHS
LKKLSHIELQKTSGKCEKKADDQQSTSENMSENTENTDEDLQGDQDTYILTLSQKSTEDT
EPSTSKGDVKHQTLFEECSQLAELDVTSCAKSAPVVIIQAIKKGGDPMAVQRTLTEHMPN
NVILYAADIGTVRQLEVYQNNHPSIGLKVYFLIYGGSVEEQEYLTSLRREKEAFHSLINT
KTTMVVPEEQDGKSEDCLALMIHSDSAAAEENTRKGGMQSEAKVIPKVIVDMREFRSELP
AILYTRGIKIEPVTLVVGDYILTPEICVERKSISDLIGSLLSGRLYNQAVAMTRHYAKPM
LLIEFDQNKPFCFQGNYYGSRDFQNSTITTKLQLLTLHFPKLKIIWSPSPHATAQLFEEL
KQGRDQPDANVAAKIGADENTEDKQIMMEKYNSRIQDFVAKLPGVHSKNLRVLLNKGQSL
SHLIRLTKEELKEILGNANDAEMLHKALHEKCLSTDEKSSTKVSKVRGKNLFTRVKKAKT
NT seq 3063 nt   +upstreamnt  +downstreamnt
atgcgctgtactatgaagacaatattgttcattattggaacgctgttaacctgtgcacta
gcattagaagaagaattgttgcactacgttagtgatgatgtgcctggtggctcctataaa
tattatagtttaacctacgatggttacattaagatacggttaacgtcaataacaggtgat
gcagatttatacgcatcgcagactacaaccaagccgacatatgagccagatcactattgc
ctgcaatccacaacttgtggcgaagatattattttcatacccaagagttttaagcgacct
gtaagcatcggcgtttatggccatccatcacatgagattagtaaatatactctgtcagta
tttgaggtgacagttgaggacgacaattttccttatcaccaaacatcaagatcaaaatta
tcggcgataatgttggaatacgaaaatcaaatctttctcgacatcctccatgaggatgga
ctggttattacagccaagggtcttggtatagaaattgtctttggaaatgtactgaaggct
tattcagacccgggcaatctggtcattgtcctggggaccactgattatgatgagcgttac
ttcattgacctactcaagagttacggaacgaacatgttaccacgcgtggtcaatgctgag
tgtccttccaacgagagggaagtgatgtacctggaaggtggagtactgttcatatcgggc
cgcatcttggtggtggatctgttgaagaatcgagtaccactgcacctagtcaccggtgtg
ctcgtgtacagagctcacaacatcctgaacgcgtatcaagaagcgttcgcgctgcgtctg
tacaggcagagcaacaagactggattcatcaaggcgttcacgaactcgtcgctggctttc
acagtcgggttttcgcgggtggagcgagtcatgaaggcgctgttcgtgaagaagttgtac
ctgtggccgcgcttccactcgatcgtcaacagctgtctgtccaagcacatgcccgaagta
atagagctgcatgtgaagatcacgccgaagatggagaacatccagaccgctttgctcgac
atcatgaattacatcgtgaaggagctgaagcgacttaataagtacctggatctggacgaa
ttgaccgtggagaacgcgattgcgaagaagtttcacaagcagttgcacttgcaactcgat
ccaatctggcatcaactcagcacgacgaccaagcaactgttctcggatctgaaaacactg
cggtctctcgttatgtccttgacgtaccaagactcggtttcattttactgcatgctaaat
agtttacgtactatggagtacgccgtgaaggcaagcggttggataatgttggacgaggcc
gagaatttatttaaatacgccaagagcagagtttacacggacaagagtgaattgaagcca
gaaccgaatccaaagtggatagctctgtcggaggtactgaacgagatccaggaacagaag
cgtaagaaggacgacgatagcatcgacaaagtttttatcctagtgcaggataacaatgtg
tgccaccagttaaagaattatttaaccatgggtgcgaacgaatacctgctttaccactcg
ctgaagaaactgtcgcatattgaactacaaaaaacaagtggcaagtgcgaaaagaaagcg
gacgatcagcagtctacgtctgaaaatatgtcggaaaatacggaaaatacggatgaggat
ttacagggagatcaggatacttacatactcacattgtcgcaaaaatctacagaggatact
gaaccgagtacttctaagggagatgtgaaacatcagactttgttcgaggaatgctcacaa
cttgcggaattggatgtaaccagttgcgcgaaatccgcacctgtcgtgatcatacaagct
atcaagaagggaggtgatccgatggctgtacaacgtacgttaaccgagcacatgccgaat
aatgttattttgtacgcagccgatatcggtacagtgagacaattggaggtgtaccagaat
aaccatccgtcaattggtctgaaagtatatttcctcatttacggtggatccgtcgaggaa
caggaatacctcacttccttacgacgggaaaaggaggcgtttcattcgttgattaataca
aaaactacgatggtcgtgcccgaggaacaagacggaaaatcggaagattgtttggctctc
atgattcactcggacagtgcagctgcggaggagaatacgcgtaagggtggaatgcaatcc
gaagccaaagtaatcccaaaagttatcgtcgatatgagggaattcagaagcgagttgcct
gctattctatacacacgtggaataaaaattgaaccagtaacgttagtggtgggcgattat
atccttacgccggagatatgcgtcgagagaaaaagtatatctgatctaattggttctttg
ctctctggaagattgtacaatcaggcagttgctatgactagacattacgctaaacctatg
ctgctcatagaattcgatcaaaataaaccattctgctttcagggaaattactacggtagc
agagactttcaaaattcaaccataacaacgaaactacaattattaacgcttcattttcct
aaattgaaaataatatggtcccctagtccacacgcgacagcacaattgtttgaggaactg
aagcaaggacgagatcagccagatgcaaatgtagctgctaaaattggagcagatgaaaat
acggaagacaaacaaataatgatggaaaaatataactcgcgcatccaagatttcgtagct
aaattgccgggtgtgcattcgaaaaatctacgtgttctgttgaataaaggacaatcatta
agccatcttattaggctgacgaaagaagaactaaaagagatacttggaaatgcaaatgac
gctgaaatgttacataaagctttgcacgaaaaatgtttatcaacggatgaaaaatcatcg
accaaagtttccaaagtacgtggaaaaaaccttttcactagagtaaaaaaagcaaaaacg
taa

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