Ooceraea biroi (clonal raider ant): 105278681
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Entry
105278681 CDS
T05778
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
obo
Ooceraea biroi (clonal raider ant)
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
obo03036
]
105278681
Enzymes [BR:
obo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
105278681
Chromosome and associated proteins [BR:
obo03036
]
Eukaryotic type
Gene silencing
piRNA pathway
105278681
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
TUDOR
Helicase_C
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
105278681
NCBI-ProteinID:
XP_026829755
LinkDB
All DBs
Position
11:complement(11647758..11653686)
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AA seq
1047 aa
AA seq
DB search
MPVISEKTMVTCNNQRDSGMLPNSSAQGSKLHEVNSSDNSLCKVSATISVTAIPVKVTNV
QTPHVMRAYEKGKEYFEKLDRINRKLGSFVRLNNLKGKSDTQDAKIGDMVIVQSSNQKHV
LELPSFICRGLITHIENAVHNVLFVDHGVSFDLARDQFCIVPRDFISDEIWSTRVVGLYN
VIPVCMRSNVLNGHKSMTVVAEGKWSDKATQCARDLLIASRDVYFDHLFTDEKNNREYGE
FYLVIDNIVVSLSEALVVEYHATYLTGDLLRLIKYSNHAQQKKDTKEEVIIRVKFSVDRL
NKTNRNLDLNRLNGHEEIPLKEFCLSEKILIHSTENCGVLSNVADLGFPSGVHRAWEDYF
KSSRPRKLQSYVWPAIKKGLNVVAVGSSQCGKTGACVMAICGLVTMRQKELPRSATRPLA
LILCSSSFEVINVQSLCVSLLGTSNSTRSVAAFTGKTDRSVAASIYSGCHILVTTPRYLA
RFLNENSGLLSFDRLYYLVFDNADIILDKYYNSVGELFKKHNIIENRELQGDDRPLLQII
TTATYWTFQLKKFTRLVMYNPYICIASFLEAVVFKSVHPKMHILKSAWKNRKISDILNDD
YMVMKTMVVCTNAEEAEELNAFLLSMTKKTLLIHEKMKSADVQNLREKWKACIRALYPIL
ICTDAVLSELDFTDIQWLIHHSVTLKFKNQYNYRFSVLLDDLVQDTTNCKVSIMIDENND
VQLQSILKMMKRMRVVIPPQLQEDVQRMAITLERDKRSYAICDNVKAFGFCQEREICVFR
HCVLPEVDEPITSIRPNDKVKLMLTYVHDASHFSARVIEHVPHAESKSEKATFSNVEYML
ITAKLHEYYQNVENRKVCASRDVGDVCVLEESLDTFKRVQIRRIRYDRDSSEEVKFVDVR
CIDSGIVYRHVDVRRLVHLPEELSRLPTHTVEVFLTDIAPYDEEYIWNQHSNDAVHQWFS
ENFNRRSYIIGKVRLHLGNTIWLDDLEIGTKLIAHGDLIGSSLKRYLVSGNYAVSNKDHL
SRLCKNSGLTEVNGLTEVNGHRVNGCE
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgccagttatcagtgagaaaacaatggtcacctgtaacaatcaacgggattcaggaatg
ttgccaaattcttcagctcaaggtagcaaactgcatgaagtaaacagttctgacaacagc
ttgtgtaaagtttcagctactatttccgttacggccataccagtcaaagtgacaaacgtt
cagactccacatgtaatgcgagcttacgaaaaaggcaaggaatatttcgagaagctcgac
aggataaacagaaaattagggagctttgtcaggttgaataatctgaagggaaagagcgat
acgcaggatgccaagattggtgatatggtcatcgtacagagcagcaatcagaaacacgta
ttagagttaccatcgtttatctgccgcggtctgataacgcacattgagaacgcagtgcac
aacgtactcttcgtggaccacggtgtgagtttcgacttggcgcgggatcagttttgcata
gttccgcgcgactttatctccgacgagatatggtcgacaagagtggtcggcctgtacaac
gttataccagtttgcatgaggagcaatgttctcaatggtcacaaatccatgacagttgtt
gcagagggaaagtggagcgacaaggcgacccagtgtgcaagggatctgctgattgcatct
cgagacgtatatttcgatcacctgttcacggatgaaaagaataaccgggagtacggagaa
ttttatctcgtcatcgacaacattgttgtgtcgttaagcgaagctctggtcgtcgagtat
catgcaacgtatttgacaggagatttattgcgactcattaaatattcaaatcacgcgcaa
cagaaaaaagatacaaaagaggaagtgatcatacgcgtgaagttttcggttgatagactt
aataaaactaatagaaatcttgatcttaatagactcaatggacacgaggaaattcctctg
aaggaattttgtctcagcgagaagattctaatacacagcacagaaaactgcggggtttta
agtaacgtcgctgaccttggctttccgtctggagtgcatcgggcttgggaggactatttt
aaatcctcgaggccgagaaagcttcagtcttacgtgtggccagcgataaagaagggattg
aacgtcgtcgctgtcggatcatcgcaatgtggtaaaactggtgcatgcgtaatggctatt
tgtggtttagtaacaatgcgtcagaaggaattaccacgtagcgcgactcgtccgttggcg
ttaatcttgtgctcctcgtctttcgaggtgatcaatgtccagtcgttgtgcgtgtcattg
ttaggcacttctaacagcaccagatctgtagcagcgttcactggcaagacggatagatca
gtagcggcatcgatatacagcggctgccacatcttggtgaccacgccacgatacttggct
cgatttctgaacgaaaactcgggcttgttgtcgttcgacaggctctactacttagtcttc
gacaacgccgatattatcctggataaatattacaattcggtgggggagctatttaaaaag
cacaatataatcgagaaccgtgagctgcagggtgacgaccgaccgttgctgcagattatt
accacggcgacgtactggacgttccagcttaagaaatttacgcgcttagttatgtacaat
ccatatatatgcatcgcctcgttcttagaagcggttgttttcaagtctgttcatccaaag
atgcatattctgaagtctgcatggaaaaatagaaagatatcagatatactgaatgacgat
tacatggtgatgaaaaccatggtggtgtgcacgaacgccgaagaggccgaggaattgaac
gcgtttttactttcgatgacaaagaagaccctgctgatccacgagaagatgaagtcggcc
gacgtgcaaaatttacgagagaaatggaaggcatgcatacgcgccttgtatccgatattg
atatgcaccgacgcggttttatcagaactcgattttaccgatatccagtggctgatacat
cactccgtgacgctgaagtttaaaaatcagtacaactacaggttctccgtgctcctggac
gacttggtgcaggataccacgaattgcaaggtgagcataatgatcgacgagaacaacgac
gtgcaattgcaaagtatactgaagatgatgaagcgaatgcgagtggtgataccgccgcag
ctgcaggaagacgtccagcgcatggcgatcacgttggagcgggacaagaggagctacgcg
atatgcgacaacgtgaaggcgttcggcttctgccaggagcgggaaatctgcgtgttcagg
cactgcgtgctgcccgaggtcgacgagccgatcacgagcattcggccgaacgacaaggtg
aagctgatgctgacgtacgtccacgacgcgtcgcacttttcggcaagggtgatcgagcac
gtcccgcacgcggagtccaagtccgagaaggcgacgttctccaacgtggagtacatgcta
atcacggccaagctgcacgagtactatcaaaacgtcgagaacaggaaagtgtgcgcttcg
agggacgtgggcgacgtctgcgttctcgaggagtccctcgacacgttcaaacgcgtgcag
atcaggcgcatccgatacgacagagacagttccgaggaggtgaaattcgtggacgtgagg
tgcatcgatagcggcatcgtataccgacacgttgacgtgcgtaggttggtacacctgccg
gaggagttgtcgagactaccaacgcacacggtggaggtgtttttaaccgatatagcgccg
tacgacgaggagtacatatggaatcagcactctaatgacgctgttcaccagtggttctcg
gaaaatttcaaccggaggtcttacatcatcggcaaggtccgtctccacctcggaaacacg
atatggctggacgatctcgagatcgggacgaagctgatcgctcacggcgacttgataggc
tcctccctgaagaggtatctcgtctccgggaattatgccgtttcgaacaaagatcacttg
tcgcggctttgcaagaacagcggactgacggaagttaatggactgacggaagttaatgga
catcgcgtaaacggctgcgaatga
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