Ooceraea biroi (clonal raider ant): 105278854
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Entry
105278854 CDS
T05778
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105278854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
obo03041
]
105278854
03110 Chaperones and folding catalysts [BR:
obo03110
]
105278854
04121 Ubiquitin system [BR:
obo04121
]
105278854
Enzymes [BR:
obo01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
105278854
Spliceosome [BR:
obo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
105278854
Complex C
U4/U6.U5 tri-SnRNP related factors
105278854
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
105278854
Chaperones and folding catalysts [BR:
obo03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
105278854
Ubiquitin system [BR:
obo04121
]
Ubiquitin ligases (E3)
U-box type E3
105278854
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
zf-NOSIP
zf-Nse
HAT_Syf1_M
Motif
Other DBs
NCBI-GeneID:
105278854
NCBI-ProteinID:
XP_011336561
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All DBs
Position
12:567961..570590
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AA seq
522 aa
AA seq
DB search
MGKRQHQKDKMYLTYTEWSTLYGGRKSGTSQETNEEKMFRRLPYDHCCLSLQPFEHPYCD
LNGNVFELEAILAYMKQYKHNPVTGKQLDAKSLIKLNFYKNAQNEYQCPVLFKLFTKHSH
IVAIKTTGNVFSYEAVEQLNIKNGNWKDLMNDQPFTRKDIITIQDPNNVMKFNLSTFHHI
KNNIRVEDEETIRERNNPNAKLKTVSMETKEILTELEREYKPAASGKKDGAPAQKADKFN
AAHYSTGEVAAGFTSTVMPAETTHQAAIIAEDVVRYERVKKKGYVRFVTNFGALNLELHC
DLVPKTCENFIRHCQDGYYDGTKFHRSIRNFMIQGGDPTNTGNGGKSIWGKAFEDEFKPN
LVHQGRGILSMANSGPNTNGSQFFVTFRSCRHLDRKHTVFGKIVGGLDTLNAIEKVEVDN
KDRPIEDIVVQSTQVFVDPFQEADEQLAAERSAEAERLAQEADRSRTVNKVDRNDMQVYR
SGIGKYVKLEQKLNKQDVSTEPVAKKKKKALQSYGDFSSFTF
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggggaaacgtcagcatcagaaggataaaatgtacctaacgtacacggaatggtcgacg
ttgtacggtggcaggaaatcggggacgagtcaggaaaccaacgaggagaagatgtttagg
cgcctgccgtacgatcactgttgcttgagcctgcagcccttcgaacacccttactgcgac
ctgaacggcaacgtgttcgaattggaggccattctggcgtacatgaagcaatacaaacac
aatcctgtcacggggaagcaattggacgccaagagtttgattaaattgaatttttacaag
aatgcgcagaatgagtatcagtgtccggttctctttaaattgttcaccaagcactcgcac
attgtcgccatcaagaccacgggaaatgtgttctcttacgaggctgtcgaacagttaaat
ataaaaaatgggaactggaaggaccttatgaacgatcaaccatttacacgcaaggacatt
atcactattcaagacccgaacaacgtgatgaagttcaatttgtccacgtttcatcacata
aaaaataatatcagagtggaggacgaagagactataagggagaggaacaatccgaacgca
aaattgaaaaccgtctcgatggaaaccaaggagatcctgacagagttagaaagagagtac
aaaccagcagcgagtggcaagaaggacggagcacctgcgcagaaggctgataaatttaac
gctgcacactattccaccggcgaggttgccgcgggattcacctcgacggtgatgccagca
gagacaacgcatcaggcggctataatcgcggaggatgtggttcgatacgagagagtcaag
aagaaagggtacgtgagattcgtcacgaacttcggggctctaaatctggaacttcactgc
gatctcgtcccgaagacttgcgagaactttataaggcactgtcaagacggttattacgac
ggcacgaagttccacagatcgatacggaatttcatgattcaaggcggcgacccgaccaac
acgggcaatggtggcaaatccatctggggcaaggcattcgaggatgagttcaagccgaat
ctagttcaccagggcaggggcatcctctccatggcgaattctggtccgaacactaatgga
tcccaatttttcgtcacattccgctcgtgcagacacctcgatcgcaagcacacggttttc
gggaaaatagtcggcggcctggacacgctaaacgcgattgagaaggtggaggtggacaat
aaggatcgcccgatagaggacatcgtcgtgcagagcacccaggtcttcgtggacccgttc
caggaggctgacgagcagctcgccgcggaacgaagtgccgaggcggagcgcctggcgcag
gaagcggatcggagcaggacggtgaacaaggtggacaggaacgacatgcaagtctaccga
tccggcatagggaaatacgtgaagttggaacagaaattgaacaagcaggacgtaagtaca
gagcctgtcgcgaagaagaagaagaaagcattgcaatcatacggagatttctcctctttc
acattttaa
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