Ooceraea biroi (clonal raider ant): 105279006
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Entry
105279006 CDS
T05778
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03013
Nucleocytoplasmic transport
obo03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105279006
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
105279006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obo03019
]
105279006
Messenger RNA biogenesis [BR:
obo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105279006
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
105279006
NCBI-ProteinID:
XP_026828517
LinkDB
All DBs
Position
9:8824866..8835212
Genome browser
AA seq
1554 aa
AA seq
DB search
MAKGSDNPAGRRPSSRNAKPYNANNSFVRKVATKVTDFIQPSWISKWFNTSQSNEDVLDS
RENIEEEVEYEDDAQQAPPSKRSRIRMDVIHPPGTFSIQTRVKSALNVDLSKEQYPVHEM
SEDFLEPATAGPSGIGRLISSTPAAQADVRTVTAHRTDLNSLTSPTNNGMANGADDNSES
SESTSGCSSLIPQINRHEGPSNLLYSSTFPNRKRHIDDKLTFTNHLQSPRSLFLDSNSRD
TLSSRRPSFNASVMTNALDRASPLSSPFYSGNITFGGANAADLYKRGRNLFNDSSELQLK
VPRRTNVEVKPSTNAAGVDSSGMSQTAKKILEALEHFSSPISDAKKIPLKRASNTMSSIM
SRKRAREEVASPSARIGLRHLTRELTVPTVPDILKLKRRQKLQDTTVAARRIVSARSDPP
PLPQEYRLRTEGGENEKYRGKLNSKSKINLEKEETVAPVNLPNIPLPITTLPSFNFTLPS
PTAHISSATVANKENTFTFASPIKVTDAAKSLQSVNNFTFSNPIDAEDNANNTAESSSSS
MKETKGSTGASVERAAASMPNFIWSASSTAPRLKAKVKNGKDDRVGFELKSGSVMDVLCP
KNVESNLTGQSNAKSPASGGTRADKTASSDPDSGNAESFWECGDCMIRNGGKDKQCIACK
VARRNPDEKTPPPSTSTTEKAVPKLTANESFGSQFRLLMNQWECTICCVRNNRSDAKCVA
CSAPRPASNQTLSSIIKPQIKSDLMMEKFKPAEGSWECSGCLLRNAASVITCPCCNTSKP
TCLRTNSRKTDVVAEPPAQKSSVAGGAVTQGVVTSGSDIMNKFKPSKDSWECPGCLVRNN
SSVTACPCCNTAKPGSDAGASKTEQKTSSNGFGDLMKKPAGAWSCDTCLLQNDAKQTQCV
ACEALKPGTTKSSASASSSTTSTVQFKFGVPPNASGSANQAGGFKFGIDKADQPKSDGAS
PLNGFKFGSSQPLNCTSQFTFGVPTKEESKAANEASNKTNVVAASTDAARFSFKVTNLES
AKQEQETSFGTPQGGTSTAIEKSGTALSATTPFTFGVHKPGFAQPDLETQKTPSVTTGTD
SSKLTATTTVAAVSVGATVFATNAGTIPISTAAVLPPLPKTHALDAKPIFSFGAAAGSGI
TTAASNTSTSTTTCLPAFAQSSFTFSDSKTASQPAAIATFGQGVPPAAQSTKLFGANKIA
ETPAPSPSKPVSATSASTIFPIVSSSTSLFNSSESKKTTAFGMDKPSAGFALSENKISTF
GSNSPKGKPSIFGTLETTKLPGFSSPAQTSVASPLPSFGAPSSATPAATPSLFGSSNTTF
GSNSAATFSGTATTPAIFSSTKPSETTTPAASNPSLFTFGSSSQQSTSSGFNFSANTNAT
GSEAKPLFTFGSGASTSQGNNVFGSGTFGASSSAPTSTANFTFNPAKQEAAPTAFGQSAV
AAPLFGAQQVTPQTQATSSFSSTSSSSAGFNFGSTAAPTATPGGFNFGGMPSTSTPAGGF
NFNPPTSTPTVAFDPNSRPSFNFTKGSAPTSFNATPQSATAPRKIKKAFRRCMR
NT seq
4665 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggggagcgacaatccggccggcaggcggccgtcgtcgcgcaacgcgaagccc
tacaacgcgaacaactcatttgtaagaaaggtggcaaccaaggtaacggattttatacag
ccgtcatggatcagtaagtggttcaatacctctcaaagcaatgaagacgtcttagacagt
agggagaatatcgaggaggaggtggagtacgaagatgatgcgcagcaggctcctcccagc
aagcgatcgcgcattcgtatggatgtgatccatccgcctggcacattttctatacaaaca
agagtcaagagtgcgctaaatgttgacctctctaaagagcaatatcccgttcatgaaatg
tcggaagattttcttgagcccgcgacggctggaccaagtggcataggtcgtttgatatcc
tcgactcctgcggcgcaagcggatgttaggaccgtaacggctcacaggactgacttgaac
tccttaacctcgccgactaacaatgggatggcaaacggagcggacgacaattcagagtcg
agcgagagcaccagtggatgcagctcgctcatcccgcagataaatagacacgaaggtcca
tcgaacttgttgtacagttcaacatttcctaataggaagagacacattgatgacaaattg
acttttacgaatcatttgcaatctccgaggtccttgtttttagatagtaattctcgcgat
actttaagcagtcgtagaccgagttttaacgcatcagttatgacgaacgctctggaccgc
gcgtcgcccctgtcctccccgttttacagtggtaacattacatttggcggtgcgaacgcg
gcggatctttacaagcgaggccgtaatctttttaacgattcgagcgagttgcaactgaaa
gtaccaaggaggacaaatgtcgaggtgaaaccttccactaatgcggcaggagttgactcg
tcgggcatgagtcagactgccaagaagatactggaagcactggaacacttctcgtcgcct
atatccgacgcgaagaaaatcccgctgaaacgcgcgagtaacaccatgtcttcgataatg
agtagaaagagggcgcgggaagaggtggcgagcccgtccgccaggatcggcctgcgtcac
ctgacgcgcgagctgacagtaccaaccgtccccgacatactgaaactgaagagacggcag
aagctgcaagacacaaccgtcgcggcgagaaggatcgtttccgcgcgcagcgatccacct
ccgctcccgcaggagtatcgattgagaacggagggcggcgagaacgaaaagtatcgtggc
aagctgaacagtaaatctaaaataaatctcgagaaagaggagacggtggcgccggtaaat
ttgccgaatatacctctgccaatcacaacgttacccagcttcaactttaccctaccatct
cctaccgcacatattagcagcgcgactgtcgcgaataaggagaataccttcacgttcgct
agcccgatcaaggtaacggacgccgcgaagagcctgcagtccgttaacaatttcacgttt
agcaatccaatcgacgccgaggataacgcgaataacaccgccgagtcgagttcttcttcg
atgaaggagactaaaggatccactggagcctcggtcgagcgcgcggccgcgtccatgccg
aacttcatttggtccgcttcttccacagcacctagattgaaagcgaaggtaaaaaacggc
aaggacgatcgtgtcgggtttgaactgaagtctggaagtgtcatggacgtgttgtgtccc
aagaatgtcgaatcaaatctgaccggacaatcaaacgcgaaatcccccgcctccggagga
acgcgcgccgacaagactgccagctcggacccggacagcgggaacgccgagtccttctgg
gagtgcggtgactgcatgatcaggaacggcggcaaggacaaacagtgtatcgcgtgcaag
gttgctcgacggaaccccgacgagaagacgccgccgccgtcgacatcgacgacggagaag
gccgtgccgaagctgaccgcgaacgagtccttcggctcgcagttcaggctgctcatgaat
cagtgggagtgcacgatttgctgcgtgaggaacaaccggagtgacgccaagtgcgtggca
tgctccgcgccgagacctgcaagcaatcaaacactatcgtcaataattaagcctcaaatt
aaatccgacctgatgatggagaagtttaaacccgccgagggatcgtgggagtgctccggc
tgcttgctgagaaacgccgcgagcgtgatcacgtgcccctgctgcaacacgtcgaagccc
acttgcttgaggacgaactcgaggaagacggacgtcgtcgcggagccgcctgctcaaaag
tcgagcgtcgctggtggtgcggtaacgcagggtgtagtaaccagcggctctgatataatg
aacaaatttaaaccgagcaaagattcctgggagtgtccgggatgcctcgttagaaataac
agttccgttactgcgtgtccttgttgcaacaccgctaaaccgggttccgacgcaggtgcg
agcaagacggagcagaaaacgtcgtccaacggattcggagacctgatgaagaagcccgcg
ggcgcgtggagttgcgacacttgcctgctgcaaaatgatgcgaagcagacgcagtgcgtg
gcttgcgaagccttgaaacctgggactacgaaatcgagcgcgtccgcgtcctcgagcact
acctccaccgtgcagttcaagtttggcgtgccacctaacgcgtcgggctcggctaatcaa
gcgggtggatttaaattcggcatcgacaaagctgaccagcccaagtcggacggcgcgtcg
ccgttgaatgggttcaagttcggcagttcccagccgctcaactgcacgtcgcagttcacg
tttggcgtccccaccaaggaagagagtaaagctgcaaacgaagcgtctaacaagaccaac
gtcgtcgcagcttccaccgatgcggcaagattttcgttcaaggtgacgaatctcgagtcc
gcgaaacaggagcaggaaacgtcgttcggtacaccgcagggtgggacttcaacggccatt
gaaaaatcgggtaccgcgctcagtgctaccactcctttcacgtttggagtgcataaaccg
gggttcgctcagcccgatctggaaacacagaagacgccttctgtaacgactggaacggac
agctccaagttaacagcaaccacgactgtcgctgctgtttccgttggcgctaccgttttc
gctactaatgccggtacgataccgatcagcaccgctgcagtactaccgccattaccgaag
actcacgcattagacgcgaagccaatattctcattcggtgcagcagcaggcagcggtata
accaccgctgccagtaacacttccaccagcacgacgacttgtcttccagcttttgctcaa
tcttctttcacattttccgattcgaagacagcgtcccagccggccgcgatagcaaccttc
ggccagggcgttccgcccgccgcgcagtctacgaaattattcggagcgaacaagatagcc
gagacccccgccccgtcacccagcaagcccgtgagcgcaacatcggccagcacgatcttt
ccgattgtctcgagctcgacgtcgctgttcaacagcagcgagtcgaagaagacaacggcg
ttcggcatggacaagccgtcggcagggttcgccctgtccgagaacaagatctcaacgttc
ggcagcaacagccccaagggcaaaccatcgatcttcgggacgctggaaacgacgaagctg
cccgggttcagttcacccgcgcagacatccgtggcgagtcctctcccgagcttcggcgca
ccgtccagtgctactcccgctgctaccccttcgctctttggctcgtccaacaccaccttc
gggagcaacagcgcggccactttcagcggcacggcaacgacacctgcgatcttctcgtcc
accaaacctagcgagactaccactccagccgcgtcgaacccgtcgctgttcacgttcggc
tcgtcgtcgcagcagtcgaccagcagcggcttcaacttctccgcgaacaccaacgcgact
ggctccgaggcgaaaccgctgttcacgttcggtagcggtgcgagcacgtcgcagggcaac
aacgtattcggtagcggtacgttcggggcgagctccagcgccccgacgagcaccgctaac
ttcacgtttaacccggctaagcaagaggcggcaccgacggcattcgggcagagcgcggtg
gcggctccgctgttcggtgcgcaacaagtaactccgcagacccaggcaacgtcgtcgttc
tcgtccacttcgtcatccagcgcgggattcaattttgggtctaccgcagcgcccaccgct
acgccgggaggtttcaacttcggaggaatgccatctacgtctaccccagctggaggtttc
aattttaaccctcccacctctactcctacagtggctttcgatcccaacagtcggccttcg
ttcaacttcaccaaaggaagtgcaccaacatcgttcaatgctacgccccaatcagcaaca
gcacctcgaaaaatcaaaaaagcgtttcggagatgcatgcggtag
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integrated database retrieval system
