Ooceraea biroi (clonal raider ant): 105279038
Help
Entry
105279038 CDS
T05778
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105279038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
obo03021
]
105279038
03036 Chromosome and associated proteins [BR:
obo03036
]
105279038
Transcription machinery [BR:
obo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
105279038
Coactivators
SAGA/TFTC/STAGA complex
105279038
Chromosome and associated proteins [BR:
obo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
105279038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
TAF
Motif
Other DBs
NCBI-GeneID:
105279038
NCBI-ProteinID:
XP_011336873
LinkDB
All DBs
Position
9:complement(7304595..7314047)
Genome browser
AA seq
985 aa
AA seq
DB search
MASAKFLEEALSTDVDESAVNAIVGSLETQLVTSTPAAAGQHQASTASVSQQNHQVNSAI
SNGGTITAVQPQKHGVSNGGGGATTVNSLMTQEVTKSITTSTLLPVNVVTSNTVAPQVIT
TQQQQQQHAQPPGIPAAAYINQVATNQVSGNQTTHIPSLTKTHEPVKIIYPSVSQVIATT
GVANANNKISFPTQTVGQLANGTLGITSQSVLQTTSNVVVTNVGSVTQTGSQTVTAVNKP
TGAALVIKTTVAPGGMVSVPMSVPVSVTGNAVSTALQAKAGVTSTIVPSNVQILNVNTMR
PATPVAGQQANKQVTPRVVIGQQLVAGTRPGTQGITLQALHGLQPGTQGHLLLKTENGQY
QLLRVGPAPTASTPAGTTVTPNNIAGNAVVAAPSPGTTYRLTSVPAVSRLNTQFTGPPLA
TLRKSVQTVAPTITTSTTTPGTVTTAPTTTSAPTATTVQTVQTVQTSAAPRQTIDNTKEK
CRKFLANLLELSSREPKSVERSVRTLIQELIDTKVEPEEFCDRLEKLLNASPQPCLIGFL
KKSLPLLRQSLVTKELVIEGIKPPPANVVFSIASAVVPTITQQTQYRPAVAIAATVPVTA
TVATAATATTQVRVMTPLPTAVTATAVVTTVPRPAQPVQQRLVRPVTTTVVRTPTTAYTV
KSTAAITGIRPAAPVVQKPPLVATTVMKTVTTTAQSKTVNTTTTVNKAVVPSLVQKPAPK
EKEKKTFSSAGYTADDDINDVAAMGGVNLAEESQRILGSTEFVGTQIRSCKDEVFLHVAP
LQQRIKQIVSSYGLEEPNQEVAALISHAVQERLRNLVEKLAVIAEHRIDLLKVDPRYEVT
QDVRAQLKFLEDLDKVERRRHEEQERELLLRAAKSRAKTEDPEQAKLKAKAKEMQRVEME
ELRKREANLTALQAIGPRKKPRLDVAGSTSSPGNAPGANASASGLNRQMPMRPRLKRVNF
RDLLFLLEQEKETCRSKMLYKSYLK
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagctaagtttctggaggaagctctgagcacggatgtcgacgaatccgcagtg
aacgcgatagtgggctccctcgagacgcagctagtaacgtcaacaccggcggcggcgggc
cagcaccaggcaagcaccgcgtcggtcagccagcagaatcatcaggtgaacagcgctatt
tccaacgggggcaccatcacagcggtacagccgcagaaacatggggtttcgaacggcggc
ggcggcgcgactaccgtgaacagtctgatgacccaggaagtcaccaagtcgatcaccacc
agcaccctgctgccggtgaacgtggttacctcgaacacagtggcgccgcaggtcatcacg
acacagcagcaacagcaacagcacgcacaaccgccggggatacccgccgctgcctacatc
aaccaagtcgccaccaaccaggtgtccggcaaccagaccacgcacataccaagcctcacc
aagacgcacgagccggtcaagatcatctaccccagtgttagccaggtgatagccactacg
ggggtggcgaatgcaaacaacaagatttccttccccacacagactgtcggccaactggcg
aacggcacgttgggcataacgtcgcaatcggtgctgcagaccacgtcgaacgtcgttgtt
accaatgttggctccgtcactcagacgggtagccaaacggtgacggcagtgaacaaaccg
accggcgcagcattagtgatcaagactaccgttgcacctgggggtatggtttctgtacca
atgtcggtgccagtctcagtgactggcaacgcggtcagcacggcgttgcaagccaaggct
ggtgttacgtcgacgatagtacccagcaatgtccagattctcaatgtaaataccatgcgt
cccgccacgccggtagcgggacagcaagcgaacaagcaagtcacaccgagggtggtgatt
ggccagcaactggttgcaggaacgagaccaggaactcaggggataacgttgcaggcactg
catggccttcagcctggtactcagggtcatctgttattgaaaacagagaatggacagtat
cagttactgagggtgggtccagcgccaactgcgagtactcccgctggtactacggttacg
ccgaataacatagctggaaacgcagtggtcgctgcaccttctccgggcactacgtaccgc
ctaacttcagtgccggctgtaagtaggctgaacactcagttcactggcccaccactcgcc
accctaagaaaatctgttcagactgtggctcccaccatcactacatcgactactaccccg
ggaacagtgaccacagcacccacaaccacttctgcaccgacggccactactgttcagact
gttcaaacggtccaaacatctgctgcaccacgtcaaactattgataataccaaagaaaag
tgccgtaaattcttagcgaacttgttagagttatctagtcgagagcctaaatcagtggaa
cgcagtgtgcgaactttgatacaggaactgatcgatacgaaggttgagccggaggaattc
tgcgacagactcgaaaaattgctgaacgcctcgccgcaaccttgtctcatcggatttctc
aagaagagcctgccgttgctgcgacagtcgctcgttacgaaggagttggtcatagagggc
ataaagcctcctccggccaatgtcgtcttctctatagcgtcggctgttgttcctaccatc
acccagcaaactcagtacagacctgcggtggcaatagcggcaacagttccggtcacggcg
accgtcgcgacggcggcaacggctacgacgcaagtgagggtcatgacgccgctaccgaca
gcggtaacggcaacggcagtggtcactacggttccacgacccgcgcaacctgttcaacag
aggctggttcgaccagtaacaacgacggtggttcgcactcctaccacggcgtacaccgtg
aaatcgacagcagcgataaccgggattcgcccggctgctcctgtcgtgcagaagccaccg
ttagtcgcgacgacggtgatgaaaacggtgacgactaccgcgcagagcaaaacagtcaat
acaactactactgttaataaagccgtagtgccttccctcgttcagaaaccggctccgaaa
gagaaagaaaagaagaccttctcatcggcaggatacacggcggacgacgacataaacgat
gtggcagcgatgggtggcgttaatcttgcggaggaatctcaaagaatactcggctctaca
gagttcgtcggtacccagatacgatcctgtaaagatgaagtatttttgcacgtagcgccg
ttacaacagagaattaaacaaatcgtatccagctacggattggaggaacccaaccaagag
gtagcggcgttaatttcgcacgctgttcaggaaaggttaagaaatttagtagaaaaatta
gcggtcatcgcggagcacagaatagatctcttaaaggtcgatcctagatacgaagtgaca
caggacgtaagggcgcaattgaagtttttagaagatttagacaaggtggagcgcagaagg
cacgaggagcaggaacgggagctgctcttgcgcgccgcgaagagccgcgcgaaaacggag
gatcccgagcaggccaaattgaaggccaaggccaaagagatgcaacgcgtggaaatggag
gagctgcggaagagggaggcgaacctgacggccctacaggcgatcgggcctcgtaagaag
cccaggctcgacgtagcgggatctacgagcagcccgggtaacgcgcccggcgcgaacgcc
tcggcgagcgggctgaacaggcagatgccgatgagaccgcgcctgaagagggtgaacttc
cgggacctgttgttcctcctcgagcaggagaaggaaacgtgtaggagcaagatgctgtac
aagtcgtatctgaagtga
DBGET
integrated database retrieval system
