Ooceraea biroi (clonal raider ant): 105279243
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Entry
105279243 CDS
T05778
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 27C isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105279243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obo03019
]
105279243
Messenger RNA biogenesis [BR:
obo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
105279243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
105279243
NCBI-ProteinID:
XP_011337190
LinkDB
All DBs
Position
7:7931198..7972620
Genome browser
AA seq
463 aa
AA seq
DB search
MRVKTEMDDDEKGKLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVT
FSDPANVSLVLQNGPHQLDGRTIDPKPCNPRTLQKPKRSGGFPKVFLGGLPSNVTETDLR
SYFTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEEAVDRCVAEHFVNLNGKQVEIKRAEP
RDSSSKMNDSHQGQWGPPQQGGPPMGMAGNMGPMGGPNGQMGGPMMGGPMGPPGNMMQQY
QGWGTSPQTGGYAGYSTQYNAQGWGAPPGPPQQQQIPPPPPHQWGSSYNVQPAAATQGYG
SYGGPAAAASGGYGPTAGTGGAAGGGPGGSWSSWNMPQNGPPPGTQPPPQPPQPNSSQPN
SNSNPSGPQGDMYSRQNTGSGAPGSSSSSAKTPDYTGYSAYSNYADTTYPQRSYQGGESN
QGTGYGPSSVPAAPGTNDNYSGGPQRGYTGSSSGSNNYHPYRR
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgagagtgaagaccgaaatggacgacgacgaaaagggtaaattattcgtcggtgggtta
tcatgggagacgacgcaagaaaatctccaacgttacttcggccgctatggcgaagttatc
gattgcgttgttatgaaaaacagcgaatctgggcgcagtcgtggatttggctttgtaaca
tttagcgatcccgctaatgtttcgttggtcctgcaaaatggtcctcatcaacttgatgga
cgtacaattgatccgaaaccatgcaacccacgcactctccagaaaccaaagcgtagcggt
ggtttcccaaaagtttttctaggtggcttgccaagtaacgtgaccgaaactgatttacga
tcctactttactcgctttggcaaggtgatggaagtagttattatgtatgatcaagaaaag
aagaaatctagagggtttggctttctcagctttgaggacgaagaagcagtggaccgatgt
gttgccgagcattttgtcaacttaaatggaaagcaggttgagattaaacgtgccgaacca
cgggactcatccagcaagatgaacgatagtcatcaaggtcagtggggtccacctcaacag
ggtggtccgcctatggggatggctgggaatatggggcctatgggtggaccgaacggacaa
atgggaggacctatgatgggaggacctatgggcccacctggcaatatgatgcaacaatat
caaggttggggtaccagtccacaaacgggtggatacgctggatacagcactcagtacaat
gctcagggttggggtgcacctccaggaccacctcaacagcagcagattccaccgccaccc
cctcatcagtggggtagcagttacaatgtccagcctgctgcagctactcaaggatacgga
agctacggtgggccggcggcggccgcttcagggggctacgggcccacggcgggtactggc
ggggctgcggggggcgggcccgggggttcctggagctcctggaatatgccacagaatgga
cctcctcctgggacccagcccccaccccagccccctcagcccaactcctcgcagcccaac
tccaactcgaacccctctggcccgcagggtgatatgtattcacggcaaaatactggctcg
ggtgcacctggatccagcagtagttcggcaaaaactccggattacactggatactctgca
tatagcaattacgcggataccacttaccctcaacgttcgtatcagggaggagaaagcaac
caaggcaccggatatggaccttcgagcgttcctgctgcaccaggaaccaacgacaactat
agcggtggaccccaaaggggttatacgggatcttcgtccggcagcaacaattatcatcct
taccgccgctaa
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