Ooceraea biroi (clonal raider ant): 105279347
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Entry
105279347 CDS
T05778
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo04140
Autophagy - animal
obo04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
105279347
04148 Efferocytosis
105279347
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
obo04131
]
105279347
Membrane trafficking [BR:
obo04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
105279347
Hops complex
105279347
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
zf-C3HC4_2
zf-RING_2
zf-rbx1
Beta-prop_EML_2
zf-C3H2C3
zf-C3HC4
zf-RING-like
Beta-prop_WDR36-Utp21_1st
zf-RING_5
PSII_Pbs27
TPR_11
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
105279347
NCBI-ProteinID:
XP_026826899
LinkDB
All DBs
Position
1:complement(23694825..23700948)
Genome browser
AA seq
1108 aa
AA seq
DB search
MAFLEWRRFNFFDLKKEVDAGKIATAFGGAQVAAATSGNGNLVFGDNTGNIHLINRAYEV
TTFRAYEITLTLAQQVQHSTFLFTIGEDEPGCNPTIKVWNLAKLDKQGNPTCVRISRAIP
SYRAVPATALCVHSSLTLMAVGFGDGSIMLYRGDLTRERKNRIKVLKDANLSITGLAIRA
TGKQTHLFVATQNSVFLYNVTVKDKEFKSTLDNMGCARRCSVLADTMQDGHFMIGRNDAI
YCYTPDGRGPCYAVEGQKIMLEWFRTYLVIVAKEAANVPRTTTISAKSNTIEPIPPGVDK
HVITVLDIQNKFIVFSATMVSVQAVLSEWGGFFVLSGDNKLYHLDEKDLQSKLALLFKKN
LYDVSIRIAKNQQYDAEGLIDIFRQYGDHLYSKGDHNGAIEQYIKTIGKLEPSYVIRKFL
DSQHIDNLTTYLQALHKNGKATEDHTTLLLNCYTKLNHTDKLKEFIMTKDREVDFDVDIA
IKVCRQASPEDALLLAQKHGKHEWYLRIQIEDKQEYKKALEYIATLEFEEAEANMKKYGN
ILIENVPNESTQFLKALCTNYKPSNKPLVDQEALNGYTEQRVDKANPEDFIHLFLNNSER
LVEFLEHLVKSDTRWSTLVYNALVEHYLHVWSALDNDVAKIQYEQKIVRLLQNSEAHYDK
DQILILCHQHNFRKGLLFLYEESKLYQEILRFHLREGDSEQVLATCKRFGHQDPNLWVQA
LWSVAKNKDAPTKLLADILAYIAQERLLSPLMVIDAISTSLTCTLGDVRSYLCSVLRTEN
EQTQADAELTEKYKADTRKLREQIEAIKNSTIIFQGSRCSACHHQLELPSVHFMCQHSYH
QHCFQSFSENENECPACLPNNKKLLDIIRAQEQSRDLHETFHSLLDRAEEPFSLVADYFG
RGVFKKLTVITDTDKSLPTPTRPEEPKLNYGPGAEARLRLNEGKSSISVGKAEARRAAHD
VPTLVTDDRYRGFAKPDVYSSSLEANISSTGSGLSTPRGNSAKASPVPIREARIMNSTTP
KSSPIERPFVPPKAPIVPSNPFETDDYDESKNPFVNDDDYDNSKNPFANDDDDDDDANNP
FKDDDDNDNDGAGNDDDDYNRNLNPFGR
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttctggagtggagacgctttaatttctttgatttgaagaaggaagtcgacgcc
ggcaagatcgccactgcgttcggaggtgcgcaagtcgcggcagctaccagcggcaatggc
aacctggtgttcggagacaacactggtaacatccacctgatcaatcgggcgtacgaagtc
acgactttccgggcttacgagatcacgctgacattggcgcagcaagttcaacattccact
tttctattcacgatcggggaagatgagcctggctgtaaccctaccataaaggtctggaac
ttggcgaaactggacaagcaaggcaatccgacgtgcgttcgcataagcagagccataccc
agttacagagcagtcccagcgacggctctgtgcgtccattctagtctcacgttgatggcc
gtcgggttcggcgacggctctatcatgctctacagaggcgacctgaccagggagaggaaa
aatagaataaaagtgctgaaggacgccaatctgtctattaccggcctcgcgataagagcg
accggcaagcagacgcatctgttcgtcgctacgcagaacagtgtgttcttgtacaacgtt
actgttaaggataaggagttcaagtctactctggacaacatgggctgcgcgcgaaggtgt
agcgtgctcgcagacaccatgcaggacggccacttcatgatcggtcgtaatgacgctatt
tactgttacacgccggacggcagaggcccgtgctacgcagtggagggtcagaagataatg
ctggaatggttcaggacgtacctggtgatagtggcgaaggaagcggcaaacgtcccgcga
acgacgaccatatccgccaaatccaacacgatagagccgataccacctggcgtggacaag
cacgtcatcacggtgcttgatatccagaacaagtttatcgtcttctctgcgacgatggtg
tctgttcaggcagtcctgtccgagtggggtggatttttcgtgctcagcggggacaacaag
ctgtaccacttggacgagaaggatctgcaatccaagttggcgctgctgttcaagaagaac
ctgtacgacgtttccatacgaatagcaaagaaccaacagtacgacgcggaaggtctgatc
gacatattccgtcagtacggtgatcacttgtactccaagggggaccataacggcgcgata
gaacagtacatcaagactattggcaagctggaaccgtcttacgtgataagaaagttcttg
gattcccagcacatcgataacctaacgacgtacttgcaggcgttgcacaaaaacggaaaa
gcgaccgaagatcacactaccttgttactgaactgctacaccaaactcaatcataccgat
aaattgaaagagttcatcatgacaaaagatcgcgaagtcgacttcgacgtggatatagcg
ataaaggtttgccggcaagcgtcgccagaagacgctctgttactcgcgcagaagcacggc
aagcacgagtggtaccttcgtattcaaatcgaggacaagcaggagtataagaaggcgctc
gaatatatagctacgttagaattcgaagaggcggaggctaacatgaagaagtacgggaat
atcctgatagagaacgtgccgaacgaatctacgcagtttctgaaagccttgtgcacgaat
tacaaaccttccaacaagcctctcgtggatcaggaagctttaaacggttacacggagcaa
cgtgtcgacaaagctaatccagaagacttcattcatctgttcctaaataattctgagcga
ctggtggagttcttggagcatctggtcaaatcagacaccagatggagcacgcttgtttat
aacgcactggtcgagcactacttgcacgtttggtcagcgttggacaatgacgtagctaag
atacagtacgagcagaaaatcgtgcgactcctgcagaattccgaggcccattacgacaag
gaccagatattgatactctgccatcagcacaacttccggaaaggattactcttcctttac
gaggagagcaaactgtaccaagagatattgaggtttcacttgcgcgagggagacagcgag
caggttctcgccacgtgtaaacgattcggtcatcaggacccgaatctgtgggtgcaggcc
ttgtggagcgtggctaagaacaaggatgcgccgacgaaactcctcgcggacatcctggct
tacatcgctcaagaaagactgttgtctcccctcatggttattgatgcaatttccacatcg
ctgacgtgcactctgggggacgtcaggagttatctgtgcagcgtactgcggaccgagaac
gagcagacgcaagccgacgcggaactgacggagaaatacaaagcggatactcgcaaatta
cgggagcaaatagaggcgataaagaatagcacgatcatctttcagggatcgcgatgcagc
gcgtgccatcatcaattggaattgccatcggtgcacttcatgtgtcaacactcgtatcac
caacactgtttccaaagcttctcggaaaatgaaaacgagtgcccggcgtgcttgccgaac
aacaagaaattgctggacataataagggcgcaggagcaatcgagggacctgcacgaaact
ttccacagtctgctggatcgagcggaggagccattctccctggtagctgattacttcggt
agaggcgtgttcaaaaagttaacagtgataacggacacggataaatcgttacccacgccg
actaggccggaagagcctaaactgaattacggtccaggcgcggaagcgagactcaggttg
aacgagggaaagagctcgatctcggtgggaaaagcagaggcgcgccgagccgcacacgac
gttccgacgctagtaacggacgatcgttatcgaggtttcgcgaagccggacgtgtactcg
tcgtcgttggaagcgaacatatcgagtaccggaagtggtttatcgacaccgcgaggtaac
tcggcgaaagcctcgccggtgccgatcagggaggcccgcataatgaacagcaccacacca
aagtcatccccgatcgagagaccgttcgtgccgccgaaggctccgatcgtgccatcgaat
cccttcgagacggacgactacgatgagtcgaagaatcccttcgtcaacgacgacgactac
gacaattcgaaaaatcccttcgccaatgacgacgacgacgacgacgacgcgaacaatccg
tttaaagacgacgacgacaacgacaacgacggagctggcaatgacgatgacgattacaat
agaaatctgaatccgttcggcaggtaa
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integrated database retrieval system
