KEGG   Ooceraea biroi (clonal raider ant): 105279355
Entry
105279355         CDS       T05778                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
obo  Ooceraea biroi (clonal raider ant)
Pathway
obo03030  DNA replication
obo03410  Base excision repair
obo03420  Nucleotide excision repair
obo03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:obo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    105279355
   03410 Base excision repair
    105279355
   03420 Nucleotide excision repair
    105279355
   03430 Mismatch repair
    105279355
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:obo03032]
    105279355
   03036 Chromosome and associated proteins [BR:obo03036]
    105279355
   03400 DNA repair and recombination proteins [BR:obo03400]
    105279355
DNA replication proteins [BR:obo03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    105279355
  DNA Replication Termination Factors
   ELG1-RFC complex
    105279355
Chromosome and associated proteins [BR:obo03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    105279355
DNA repair and recombination proteins [BR:obo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     105279355
  Check point factors
   HRAD17(Rad24)-RFC complex
    105279355
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 Rad17 AAA_11 AAA AAA_16 Rep_fac_C Mg_chelatase RuvB_N AAA_30
Other DBs
NCBI-GeneID: 105279355
NCBI-ProteinID: XP_011337344
LinkDB
Position
1:23926422..23928480
AA seq 354 aa
MSLWVDKYRPTTLAKLDYHLDQAEDLKNMVQKRDFPHLLVHGPPGAGKRTRIMCILKELY
GSAAERLKVETMHFETASKKKLEILTTSSNYHTEVNPSDAGIHDRIVVMELIKATAQTHH
IDIGQKEFKVVLLSNVDQLTRDAQHALRRTMEKYIASCRLILCANSTSRVLPAIRSRCVR
IRVPAPTPAEIKSILHSICKREGLTLPDEFANRVIVTSDRNLRRAILMLEACKVEQYPFT
ADQKIPEPDWQVHIRNTASMMVSEQSPKVLLDIRNRFYELLTRAIPCDLIFRGLLQECVK
NCDDQLKREIIDVASEYQHKLIRGSKPIFHLEAFAARFMAIYKKYIDSSLEGFM
NT seq 1065 nt   +upstreamnt  +downstreamnt
atgagtttgtgggttgacaagtaccgtccaacgacgctcgcgaagttggactatcatctc
gatcaggcagaggacttaaagaatatggtacaaaaacgggacttcccacatttgttagtg
cacggaccacccggtgcaggaaagagaactcgaataatgtgcattctaaaggaactttat
gggagcgcagcggagagattaaaagtagagacgatgcactttgagacagcgtctaagaag
aaattagaaatattgacaacaagcagcaattatcacacagaggtgaatccgagtgatgca
ggaatacacgacaggatcgtcgtgatggagctgataaaagcgactgcgcaaacgcatcac
atagacataggccagaaagagtttaaagtggtgctgctgtcaaatgtggatcagctgacg
agggatgcgcagcacgcactccgccgaacgatggagaagtatatcgcttcgtgcaggttg
atcctctgtgcgaactcgacgtcgcgagtgctgcccgcgatccgatcgcgatgcgtgcga
atccgggttccggcgccgacgcctgccgagatcaagagtatcttgcattccatctgcaag
cgcgaagggctcaccttgccggacgaatttgcgaatcgagtgatcgtgactagcgacagg
aacctcaggcgagcgatattgatgctcgaggcttgcaaagtcgaacagtatccgttcacc
gccgatcagaaaatacccgagccagattggcaggtgcacatacgaaatacggcgagcatg
atggtgtccgagcagtcgccgaaggtccttctggatatacgcaacagattttacgagcta
ctgacgcgcgccataccgtgcgacctgatattcagggggctgctgcaggagtgcgtgaag
aactgcgacgatcagctaaagagggagatcatcgacgtcgcgtccgagtaccagcacaaa
ctgatacggggctcgaagcctattttccacttagaagccttcgccgcacggttcatggcg
atttacaagaagtacattgactcatccttggaaggcttcatgtag

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