Ooceraea biroi (clonal raider ant): 105279403
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Entry
105279403 CDS
T05778
Name
(RefSeq) protein slit isoform X1
KO
K06839
slit 2
Organism
obo
Ooceraea biroi (clonal raider ant)
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
obo00536
]
105279403
Glycosaminoglycan binding proteins [BR:
obo00536
]
Heparan sulfate / Heparin
Axon guidance molecules
105279403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_1
LRRNT
Laminin_G_2
hEGF
LRR_9
LRR_1
LRRCT
EGF_TEN
EGF_3
DHU1_N
LRR_NXF1-5
LRR_EndoS
LRR_6
Motif
Other DBs
NCBI-GeneID:
105279403
NCBI-ProteinID:
XP_011337446
LinkDB
All DBs
Position
2:17839733..18231749
Genome browser
AA seq
1507 aa
AA seq
DB search
MARAMTPVWSLRLLGVSCGSVVCAWGLLLILSVLGGTSHGTGIGNFGPDNMSGKMEDLNG
VRCPWACTCGGQEVDCSHRGLTQIPGDLASLLIAEKLDLQGNNVSVIFKTDFEDMATLHV
LLLSNNQIHTIERGAFQDLVAVEKLRLNNNQIRHLPDLLFSNMMNLKRLDLSHNQIATIG
PKTLRGVSALRHLLLEDNVLTCIDEASIRELKDLEILMLNNNKLVTLGKEMLNGLSHLRT
LKLADNALACDCHLAWLSRHLRTYPRLGQHTRCASPAHLKDRNLADLQEHEFKCSGLVER
TGSECSAEPQCPHPCKCADGIVDCRENSLTKVPTHLPEDTTELRLEQNGITEIPPKAFSP
YRKLRRIDLSNNQIKKVAADAFHGLKSLESLVLYGNKIAELPAGLFQGLTNLQLLLLNAN
EISCIRTDLFKDLTSLTLLSLYDNNIRSLADGTFANLRSIKTLHLARNPFICDCNLRWLS
VYLHAHPIETSGAKCEMPKRAQKRKIDSMRDDKFKCKGDEELLTKRAGECILPGACPAPC
TCNGATVDCSNKRLTSIPKDLPLYTSTLVLNNNELDKIKADGLFEKLPELQHLDLRKNKI
SRIEASAFQGAHNLTDLLLSENRLREVHNKMFSGLPSLKTLNLHGNSITCVMPGSFDGMP
HIRAINMQGNPLSCNCYLAWFAGWLRKRDIAGISGRCHDPPRLKDAVIKDIPHHEFKCNN
DSVGCLGDDYCPPQCNCAGSVVRCSRSQLTEIPRGIPPETTELYLDVNDIKTIQPERLNH
LRILTRLDLSNNQIGMLSNDTFRNLTKLSHLIISYNKLQCVQRNALAGLRNLRIISLHGN
DISVIPEGAFEDLKSITHLALGSNPLYCDCSMRWLAEWVKKDYVEPGIARCMEPPTMRDK
LLLTTPASAFQCKTKQQPAEVLAKCDLCYTTPCENGGFCEALPDRQFRCKCTPGYHGDRC
QHKIDACYGNPCRNAGTCKVLEEGRFSCDCAPGYKGLRCESNVDDCANNRCANNATCVDL
VQAYRCDCAPGFMGEYCEEKIPFCTKGHDPCENGGRCVDHKTHYSCECPVGFTGLNCSTN
LDDCVDHMCQNGATCIDGINNYECKCAAEYTGRYCEAAPSTAMLYPQTSPCAHHDCQHGA
CFQPAPASAADYLCQCHPGYTGKRCEYLTSLSFVDNSSLVELEPLRTRPEANVTIIFTTT
QENGVLLYDGQSDGHIAVELFNGRVRVSYDVGNYPTSTMYSYEMVADGKPHMAELLAIKK
NFTMRVDRGPARSIINEGPKEYLKLVTPMFIGGVAPEVAKVAFTEFHLRNITSFQGCISE
MWINHKLVDFSNAAKMQRITPGCAASEEEADEARDIVVAEGINNSGGNEESMPQEHVPRE
RSDIIAPVIGLMPSHACVGHECRKGSQCIPSPFGNNYSCRCQTGWQGRYCEKAPTCRKQH
IREYYSENGCRSRRPVKLAKCWGSCGNSCCLPRKTKRRKVRLICTDGMRYTKDVDLVRKC
TCTRKCY
NT seq
4524 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcgctatgacgcccgtttggtccctacgtctgctcggcgtcagctgcggctcc
gtggtctgcgcctggggacttttgctaatactgtccgtgctcggtggcacctcgcatggc
acgggtatcggtaacttcggccccgataacatgtcgggcaagatggaagacttgaacggc
gtcaggtgcccttgggcgtgtacgtgcggcggacaggaggtcgactgctctcatcgcgga
ctcacgcagattcctggtgacctggcgagcttgctcatcgccgaaaaactagatcttcaa
ggaaataacgtgtcggtgatattcaagacggatttcgaggacatggcaacgctccacgtt
ttattactatccaacaatcaaattcataccatcgaaagaggcgcttttcaagatttggtg
gcggtggaaaagctacgcttaaacaacaatcagatacgtcacctgcccgacctcctcttc
agcaacatgatgaacttaaaacgcttagatctcagtcacaatcagattgctaccatcgga
ccgaagacactgagaggagtgtccgccctcagacatttattactcgaggacaacgtgctg
acgtgcatagacgaggcttcgatacgagaactgaaagatctagaaatactaatgttgaac
aacaacaaactcgtaacgctcggcaaggagatgctgaacggcttgtcgcatttgcggact
ttgaagcttgcggataacgctctcgcttgcgattgccatttagcatggttatcgcgtcat
ttgaggacttatcctcgcctggggcagcatacgcggtgtgcgtctccggctcatctcaag
gatcgcaatctcgcggatctgcaggagcacgagttcaagtgttcgggcctggtcgaacga
acgggttcggaatgcagcgctgagccgcagtgcccgcatccttgtaaatgcgccgatggg
atcgtcgattgcagagagaactccttgacaaaagtgccaacccaccttcccgaggacacc
actgagttgcggctggagcagaacggcatcacggaaattccgcccaaggctttctcgccg
tacagaaaattgcgaagaattgacctgagcaacaaccagataaaaaaggtagcggcggat
gcgtttcacggattgaagtccctcgaatctctagttctgtacggcaacaagatagcggag
ctgccggctggtctctttcaaggcctgacgaacctgcagttactgttgctgaatgccaat
gagatatcatgcatacgaacggacctgttcaaagacttaaccagtctcactttgttgtcc
ctttacgacaacaatatacgttcgttagccgatgggactttcgccaatctgcgaagcatc
aaaacgctacacctggcgaggaatccgttcatatgcgattgcaatctacgctggctgagc
gtgtatcttcacgcgcaccctatagagacgtccggtgctaaatgcgaaatgccaaagaga
gcgcagaaacgaaagatcgattcgatgcgggacgacaagttcaaatgtaagggtgacgag
gagctgctgacaaaaagggccggcgagtgcatcctgcccggtgcctgccccgcgccgtgc
acgtgcaacggtgcgacggtcgattgctccaacaagagattaacttcgataccgaaggac
ctgccgctttacacgtcgactctggtgttgaacaacaatgaactggacaagatcaaagcg
gacggcctcttcgagaagctgccggagctgcagcatctggacctcaggaaaaataaaatc
tcccgcatcgaagcgtccgcctttcaaggagctcacaatctcaccgacctgcttttgtcc
gagaacaggctgcgagaagtgcacaacaagatgttctccggcctgccgagccttaaaaca
ctgaatctccatggtaattccattacgtgcgttatgccaggatcgttcgacgggatgccg
cacatacgcgccatcaacatgcagggtaatccgctatcgtgcaactgctaccttgcgtgg
ttcgccggatggctgaggaaacgggacatagctggaatcagtggccgttgtcacgatccg
ccgcgattaaaggatgccgtcatcaaggacattccgcatcacgagttcaagtgcaacaac
gacagcgtgggttgcctaggcgacgattactgcccgcctcaatgtaattgcgcgggttcg
gtggtgagatgttcgaggtctcagcttacagagattccacgcgggattccaccggaaacc
accgagctgtatttggacgtgaatgacatcaagacgatccagccggagcggctgaaccac
ctgaggattctcaccagactggatctgagcaacaaccagattggaatgctgtccaacgat
accttcaggaatctcacgaagctgtcgcacctaatcatcagttacaataagctgcagtgc
gtgcagcgaaacgctctcgcgggactgaggaacctgcggataatctcactgcacgggaac
gacatatcggtcatcccggagggagcattcgaggacctcaagtctataacgcatctcgcc
ctggggtccaacccgctttactgcgactgcagcatgcgatggttggccgagtgggtgaag
aaagattacgtcgagcccggcatagccaggtgcatggagcctcccacgatgagggacaaa
ttgctcctgacgacgccggccagtgccttccaatgcaaaaccaagcaacagccagccgaa
gtcttggccaagtgcgacctgtgttacaccacgccatgcgaaaacggaggattttgcgag
gcgcttccggaccggcagttccgttgcaagtgcacgccaggatatcacggggaccggtgt
cagcataaaattgacgcgtgctatggaaatccttgcaggaacgccggaacttgcaaagta
ctggaggaaggaagattcagttgcgactgcgcccccggctacaagggacttcgatgtgag
agcaacgtcgacgactgcgccaacaacaggtgcgctaacaacgcgacctgcgtcgacctc
gtacaggcctatcgatgcgactgcgccccaggattcatgggagaatactgcgaggagaag
atacccttttgcacaaaggggcacgacccctgcgagaacggaggccgatgcgtcgaccac
aagacccactacagctgcgaatgcccggtcggcttcaccggtctcaattgctccacaaac
ctggatgactgtgtcgatcatatgtgccagaacggtgctacttgcatcgatggcataaat
aattacgagtgtaagtgcgcggcggagtatacagggaggtactgcgaggctgcaccctcg
acagccatgctgtatccacagaccagtccgtgtgcccaccacgactgtcagcacggtgcc
tgcttccagcccgctcccgcctccgccgcggactatctttgccagtgccaccccggctac
accggaaaacgatgcgagtacctgacgagtctgagcttcgtggacaatagctcgctggtc
gagctggaaccgctacgcacgaggcccgaggcgaacgtgaccatcatattcacgaccacg
caggaaaacggggttcttctctatgacgggcaaagcgatgggcacatcgctgtcgagctc
tttaatgggcgggtcagggtttcgtatgacgtcggtaattatcctacctcgacgatgtac
agctacgagatggtggccgacggcaagcctcacatggcggagctgttggcgatcaagaaa
aatttcacgatgagggtcgaccggggccccgccaggagcatcatcaacgagggtccgaag
gagtacctcaagcttgtcacgccgatgttcatcggtggcgtagcgccggaagttgctaaa
gtcgccttcaccgagtttcatctgaggaacattacgagtttccagggctgcatctccgag
atgtggatcaatcataagttggtagacttcagcaatgccgcaaagatgcaacgcattact
cccggatgtgctgctagcgaggaggaggccgacgaggcgagagatattgttgtagccgag
ggaattaacaatagcggcggtaacgaggagtccatgccgcaagagcatgtacctcgcgag
cgctctgacatcatcgcgccggtaattggactgatgccctcgcatgcatgtgttggacac
gagtgcagaaagggatcgcaatgtataccatcaccgtttggcaataactattcttgtcga
tgtcaaaccggctggcaaggacgatattgcgagaaggcaccaacgtgtcgcaagcagcat
ataagggagtactacagcgagaatggatgtcgaagtcggcgacctgtgaagcttgctaaa
tgttggggaagttgcggcaactcctgctgtttaccgcggaagactaaacggcgcaaggtc
cgattaatttgcacggacggcatgcggtacaccaaggacgtcgacctggtgcgtaagtgc
acctgcacccgcaagtgctactag
DBGET
integrated database retrieval system
