Ooceraea biroi (clonal raider ant): 105279440
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Entry
105279440 CDS
T05778
Name
(RefSeq) general transcription factor IIF subunit 1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105279440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
obo03021
]
105279440
Transcription machinery [BR:
obo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
105279440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
105279440
NCBI-ProteinID:
XP_011337515
LinkDB
All DBs
Position
9:complement(9281357..9284528)
Genome browser
AA seq
535 aa
AA seq
DB search
MNTTSKPSVAPSVQEFSIRVPKNSKKKHNVMRFNATLNVDFTKWSQVKMERENNMKEYKG
LEEEMPKFGAGSEFGRDAREEARRKKYGITSRKYKPEDQPWILKSGGKTGKKFKGIREGG
ISENAAYYVFTHAADGAIEAFPLHEWYNFQPIQRYKALSAEEAEQEFSRRNRVMNYFSLM
LRKRLRNDEDGADDEDLVEGGKSKRPGKKEKELKISEMDEWMDSDDDESDSDEEEKKGGS
EDEDDKKEKKKKSKVQLQKKKKKKNASDDEAFEESDDGDEEGRECDYISDSSDSEMEAEE
QQKEIKSVAEEDALRKLLASDEEEDDEEETDKKEGEEDKDEDDEGKEKDDKDKDKLGKEA
DKRKEKKKKKKAKKKDQKKSASGKDSSSDFSSDSESDSDTTLREKDNKKSNSAHSSRSAT
PTPAAGVSDSLKKKRSGSPDLSQAKKLKLDNFNLVPVTSYIPGASESGITEDAVRRYLMR
KPMTTTELLQKFKSKKTGLTSEQLVNIMTQILKKINPTKQTIKNKMYLSIKAQSN
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaacttcaaagccttcagtcgcaccgtctgtgcaggaatttagtattagagtt
ccaaaaaacagcaagaagaagcacaacgtcatgagatttaacgcaacgttaaatgtagat
ttcacaaagtggtcgcaagtgaaaatggagcgagaaaacaacatgaaggagtacaaaggt
ctggaagaggagatgccaaaatttggcgcaggatccgagtttgggcgagacgccagagag
gaggcgagaagaaagaaatatggcattactagtaggaagtacaagcctgaggatcaaccg
tggatcttgaagtcgggaggaaagactggaaagaaattcaagggcatacgagagggagga
ataagtgaaaacgcagcgtattacgtatttactcatgctgccgatggtgctatagaggct
ttccccttgcacgaatggtataatttccagccaattcagaggtacaaagccctcagtgct
gaagaggcagagcaggagtttagccgtaggaacagagtgatgaattatttctcattgatg
ttacgcaagagattaaggaacgatgaagatggtgcggatgacgaggatttagtggaaggt
ggtaaaagcaagaggccaggtaagaaagaaaaggaactaaaaatatcagagatggacgag
tggatggatagcgatgatgatgaatcggacagcgatgaggaagaaaagaaaggaggatct
gaagatgaagatgacaaaaaagaaaagaaaaagaaaagcaaagttcagttgcaaaaaaag
aaaaagaagaaaaatgcctcagacgacgaggcgtttgaagagagcgatgacggtgacgag
gagggcagagagtgcgattatatttctgattcctccgactcggagatggaagcggaagaa
cagcaaaaggaaatcaagtctgtcgcagaggaggatgcgctgagaaaactactcgcgtct
gacgaagaagaagacgacgaggaagaaacagataagaaggagggcgaggaagacaaagac
gaagacgacgagggaaaagagaaggatgataaggataaagacaaactcggtaaagaagcg
gataagaggaaagagaagaagaagaagaagaaagctaaaaagaaggatcaaaagaagtcg
gcatcggggaaagattcctccagcgatttctccagcgattcagagtcggattcggacacg
acgctgagagagaaggataacaagaagtctaatagcgcgcacagttcgagatccgcgacg
ccgacaccggcagcgggggtttcggactccctcaaaaagaagcggtccggatccccggat
ttgtcgcaagcgaagaaactaaagctggataacttcaatttggttccggtaacgtcgtac
ataccgggagcaagcgaatcgggaatcacggaggatgcggtgaggcgttatctgatgcgc
aagcctatgacaacaacagagctgttgcaaaagttcaaatctaaaaaaaccggcctcacg
tccgagcagctcgtcaatattatgactcagatactgaagaagataaacccaactaaacag
actataaaaaacaaaatgtacctatcaatcaaagcacagtccaattaa
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