Ooceraea biroi (clonal raider ant): 105279507
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Entry
105279507 CDS
T05778
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo04120
Ubiquitin mediated proteolysis
obo04137
Mitophagy - animal
obo04144
Endocytosis
obo04341
Hedgehog signaling pathway - fly
obo04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105279507
09130 Environmental Information Processing
09132 Signal transduction
04341 Hedgehog signaling pathway - fly
105279507
04350 TGF-beta signaling pathway
105279507
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
105279507
04137 Mitophagy - animal
105279507
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
obo04131
]
105279507
04121 Ubiquitin system [BR:
obo04121
]
105279507
03029 Mitochondrial biogenesis [BR:
obo03029
]
105279507
Enzymes [BR:
obo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
105279507
Membrane trafficking [BR:
obo04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
105279507
Autophagy
Mitophagy
Other mitophagy associated proteins
105279507
Ubiquitin system [BR:
obo04121
]
Ubiquitin ligases (E3)
HECT type E3
105279507
Mitochondrial biogenesis [BR:
obo03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
105279507
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
105279507
NCBI-ProteinID:
XP_011337635
LinkDB
All DBs
Position
9:complement(15515802..15527781)
Genome browser
AA seq
915 aa
AA seq
DB search
MSNPSGSRRNGAMKIRLTILCARNLARKDLFRLPDPFAKITVDGSGQCHSTDTCKATLDP
KWNQHYDLYIGKNDGITISVWNYRKIHKKQGGGFLGCVRILSNTIQRLKDTGYQRLDLCK
AHSDDTDVVKGQIVVSLMSRDGHNGAVSNTVGHNAVVDVLGDLSCPNDLPDGWEERRTHS
GRLYYVNHHTKSTQWIRPNARPSNAIISTTPEPPALPSSEPTSPSSSASSPNVRNEESPA
RHASPEWNDGTPSQTPSRDSSAQNTPRNTPTQQQQQQNRNNQQQNQHNVRNVTTPASSAR
ERRIVRTTDEQNGNQSMNGRAERGVNGGGQARRLNRSNRNRNSVMSSGDRRTDPPQPPDL
PRGYEMRKTQQGQVYFYHVPTGSSTWHDPRIPRDLQANELANELGPLPSGWEMRQTHSGR
VYFVDHNNRTTQFTDPRLSSQIISNLLNRRQNNNTSNHAPTNVNNSVTSETAETDTTSSP
MVPSNTPQQPTRNENGSNNNSPTMESALTQNAQTVSELPKELMDNELLPKYKRDLVAKLK
CLRAELNALQPQSGHCRLEVSRNEIFEESYRLIMKMRPKDMRKRLMVKFRGEEGLDYGGV
AREWLYLLSHEMLNPQYGLFQYSRDDNYTLQINPDSGINPEHLSYFHFAGRIIGIAVFHG
HHIDGGFTTPFYKMLLNKAITLSDIEGVDPELHRSLTWMLENSIDGVLDATFSVEHSSFG
VLKNHELKPGGKDIPVTEENKREYVRLYVNYRFMRGIEQQFLALQKGFHELIPPLLLRPF
DERELELVIGGLGTIDINDWKMHTRLKHCTPDTPVVQWFWQIVESYGEEMRARLLQFVTG
SSRVPLQGFKALQGSTGAAGPRLFTIHAVDAPSENLPKAHTCFNRIDIPQNYPTYQKMLD
KLTQAVEETCGFAVE
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatccgagcggtagcaggaggaacggggccatgaagattcgtctaacaatttta
tgtgcccgcaatcttgctaggaaggatttatttcgcttaccagatcctttcgctaagata
actgttgatggttctggacagtgtcatagtacagacacttgtaaagctacccttgatccc
aagtggaatcagcactatgatctatatattggaaagaacgatggaatcactatatctgtg
tggaattatcggaagattcataaaaagcaaggcggtggctttctgggatgtgtacgcata
ttatcgaacaccatccaaagacttaaagatacaggatatcaacggttggatctgtgcaaa
gctcactccgatgacacagatgtcgttaagggacagattgtagtatccctgatgtcacgg
gacggccacaatggtgccgtgagtaacacagtcgggcataacgccgtggtcgacgtgctt
ggagatttaagttgcccgaatgacttgccggacggttgggaagaacgtagaacgcatagc
ggtcgactttactacgtaaatcatcacacgaagagcacgcagtggatccgtccaaatgct
cggcctagcaatgcgattatatcgacaacaccggaaccaccggcgttgccgtcgtcggaa
ccgacgtcacccagtagtagcgcgagctcgccgaacgtgaggaacgaagagagtccggcg
aggcacgcgtcacccgagtggaatgacgggacgcccagtcaaactcccagtcgagatagt
tccgcgcaaaacactccgcgtaatacaccgacgcagcagcagcagcagcaaaatcgcaat
aatcagcaacagaaccagcacaacgtgagaaacgtgacgacgccggcatcgtccgcgaga
gagcgtcgcatcgttcgaactaccgatgaacagaatggtaatcaaagcatgaacggaagg
gcggagcgtggtgttaacggcgggggccaggcgcgacggcttaatcgcagcaacagaaat
agaaatagcgttatgtcgagcggtgaccggcgaaccgatcctccgcaaccaccggatcta
ccgcgcggctacgaaatgaggaaaacgcagcagggccaggtgtacttttatcacgtacca
actggatcctctacctggcacgatccgaggataccgcgtgatttgcaagccaacgagttg
gcgaatgagctcggtccccttcccagcggatgggaaatgagacagacgcacagcggacgg
gtgtacttcgtggatcacaacaacaggacaacgcaatttaccgatcctcggctgtccagc
caaattatcagcaatctgttgaataggagacaaaataataatacgagcaatcacgctccg
actaatgtaaacaattctgtgacgagcgaaactgccgagacggataccacgagttcgccg
atggttccgtccaacacaccacagcagccaacgagaaatgaaaatggaagcaacaacaat
tctccgacgatggaaagcgcgctaacccaaaatgctcaaaccgtgtcagaattaccgaag
gagcttatggacaatgagcttctcccaaagtataaacgtgatttagtagcaaaattgaag
tgtcttcgagcagaactgaatgcccttcagcctcaaagcggtcactgtagattggaggtg
tcgaggaacgagatattcgaggagtcatacagactgataatgaaaatgcgtccgaaagat
atgcgcaagagactcatggtcaaattccgcggcgaggaggggctcgactatggcggcgta
gcgcgcgaatggctgtatctgttgtcccatgagatgctgaatccgcaatatgggctcttt
cagtattcgagggacgataattatacacttcaaattaatccggattcggggataaatccc
gaacacttgtcgtactttcatttcgccgggaggatcatcggcatcgccgttttccacggc
catcacatcgacggtggtttcacgacaccgttctacaaaatgttgcttaacaaagctata
acattgagcgatatagagggggtcgatccagaattacataggagtcttacatggatgcta
gaaaacagtatagacggcgtactggacgctacgttctccgtggagcacagcagtttcggc
gtgttgaagaatcacgagttgaagccgggcggtaaagatataccagtgacggaagaaaac
aagagagaatacgtccgtctatacgtgaactatcgattcatgcgcggtatcgagcagcag
ttcttggcgttgcagaaaggatttcacgagttgattcctcccctgttactgagacccttc
gatgagcgcgaactcgagttagtcattgggggtttgggcacgatcgacataaacgattgg
aagatgcacacacggctgaagcattgcacgcccgatacaccggtcgtgcaatggttctgg
cagatagtcgaatcgtacggtgaagaaatgagggcgagattgcttcagttcgtcaccggc
agctccagagtgccgttgcaaggattcaaagctttgcaaggatcaacgggagcagcgggt
ccgcggcttttcacaatccacgcagttgacgccccgagtgaaaatctaccaaaagcgcat
acttgtttcaataggatagacataccacagaattatccgacctatcagaagatgctcgat
aagcttacgcaggcggttgaggaaacctgtggctttgctgttgaataa
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