Ooceraea biroi (clonal raider ant): 105279510
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Entry
105279510 CDS
T05778
Name
(RefSeq) collagen alpha-2(IX) chain isoform X1
KO
K06823
collagen type XVIII alpha
Organism
obo
Ooceraea biroi (clonal raider ant)
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
obo04147
]
105279510
00535 Proteoglycans [BR:
obo00535
]
105279510
00536 Glycosaminoglycan binding proteins [BR:
obo00536
]
105279510
Exosome [BR:
obo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
105279510
Proteoglycans [BR:
obo00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
105279510
Glycosaminoglycan binding proteins [BR:
obo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
105279510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
Motif
Other DBs
NCBI-GeneID:
105279510
NCBI-ProteinID:
XP_026828100
LinkDB
All DBs
Position
9:15484200..15508702
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AA seq
912 aa
AA seq
DB search
MHFQIGRDADEDKSEESNPPPFITPPPPNPDYKGPKGEKGDKGEKGESVRGPPGPPGPPG
RDEEWLMKIPQGPPGQKGDPGTCICNATALMSSFTMPKMIQGPKGEPGVPGQEGKQGLMG
LTGAAGPPGERGLQGPSGAKGDKGDIGVLGPEGPQGQKGEPGRDGIPGEKGAQGPPGPPG
KGEFSGYDPSWKPRNIYRTDGITMRPGLPGQKGEPGTSGNPGPKGEAGIAGAKGIKGEPG
HKGAKGDHGKDGPRGIQGFKGEPGAPGAPGLPGAPGENGRPAEKGDKGDTGPEGKSGSPG
PPGPPGIGGSGGINVGDLGFGTKGDKGDAGARGYKGDKGTKGEKGDKGDSGPAGIPGING
IQGPQGDKGEPGKDGVSGLSGIPGAKGDRGERGPPGATTIANSGDYITIKGEKGAEGKRG
RRGRPGPPGPVGPPGKPGVTGEIGLPGWMNTIKGRPGTPGIPGSIGAMGPKGEKGEPGAP
SPYGVSVGIKGDKGDDGFPGIPGQSGRDGQRGPPGPPGPPGQPSQGNFIPVPGSPGPPGP
PGPPGISLRGEKGEPGIGGIGRVHVFGERDYYGTRQGPRSSLDELKALRELKQLKELKEQ
LGVVTAATRGPLESTTKIVPGAVTFQNTEAMTKMSSVSPVGTLAYIIDEEALLVRVNNGW
QYLALGTLLPITTPAPPTTAPPPANPPFEASNLINQIPVKADGIGWYPRMLRMAALNEPF
TGDMHGTRGADYACYREARRAGLRGTFRAFLSSRVQNVDSIVRLGDRDLPIVNIKGDVLF
NSWKEMFNGNGAYFSQNPRIYSFNGKNILTDFGWPDKVAWHGSHKLGDRAMDTYCDAWHS
SSSDRYGLGSPLTGGRLLEQVRYSCDNKFALLCIEVSSEVIRRRRSINQRPNDDVEMTEN
DYIEYLEELVQY
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgcattttcagatcggtcgagatgccgacgaagacaaaagcgaggagagtaacccgccg
ccattcatcacgcccccgcctccgaatccagattataaaggtccgaaaggcgaaaagggc
gacaaaggggaaaaaggcgagagcgtcagaggtccaccgggccctccgggaccgcctggt
cgcgatgaggaatggctgatgaagataccgcagggaccacctggtcagaagggagatcct
ggcacttgcatctgcaacgccacggccttaatgtcttcctttacgatgccaaagatgata
caagggccgaagggcgagccgggagtaccgggacaggagggcaagcagggcttaatgggt
ctcacgggtgcggcaggaccgccaggagagagaggactacaaggtccgtccggtgcgaag
ggtgataagggtgatattggggtactgggaccggaaggtcctcaaggtcagaagggcgaa
ccgggtcgggatgggattcccggggaaaagggcgcgcaaggtccgccggggccacccgga
aaaggagaattctctggctatgaccccagttggaaaccccgaaatatttacaggacggat
ggaatcacgatgaggccagggctaccgggacaaaaaggtgaaccaggtacgtcagggaac
ccaggacctaaaggcgaagccggaatagccggcgctaagggtatcaagggcgagcccggg
cacaagggtgccaaaggcgaccacgggaaggacggtcccagaggaatacagggttttaag
ggtgaacctggcgctcccggtgcacccgggttgcctggcgcacccggcgaaaacggacgg
ccggcggagaagggcgataagggcgacacgggaccagaaggcaaatctggatccccgggg
ccacccggtccaccgggtatcggcggttctggtggaataaacgtgggagatttaggattc
ggcacgaaaggcgacaagggcgatgccggtgcgcgcgggtacaagggcgataagggcacg
aagggcgagaaaggagataagggtgattccggcccagctggtattcccggaataaacggc
attcaaggacctcaaggagataaaggcgagcccggtaaagacggggtatccggattatcc
ggcatacctggtgctaagggcgacagaggcgaacgaggtcctcctggagccactactatc
gccaattccggagactatatcaccatcaaaggtgaaaagggtgctgagggaaagcgaggc
aggaggggacgacctggaccacccggtccagtgggcccgcccggaaaaccaggagtcacg
ggagaaatcggcctgccaggatggatgaacacgattaagggtcgacctgggactcccgga
atcccgggaagcatcggagcaatgggacccaagggagaaaagggagaacccggcgcgcca
agcccttacggcgtttccgtcggtatcaaaggagacaaaggagacgacggtttccccggg
attcctggtcagtctggacgagacggccagagaggaccaccaggaccaccaggacctcct
ggacaaccgtctcaagggaattttattccggttcccggatctccaggtcctcctggtcct
cctggtcctccaggaatatctttgaggggagagaaaggagaacctgggattggtgggatt
ggtagggtccacgtttttggagagagagattactatggcaccaggcaaggacccagaagt
agcctggatgaattaaaagccctacgtgaactcaagcaattgaaagaattgaaagaacaa
ttaggtgtcgtcactgccgctacaaggggacctttagaaagtacaacgaaaattgtgcca
ggagctgttacgttccaaaacacagaagccatgacaaagatgtctagcgtcagtccagtt
ggaacactggcttacattatagacgaagaagccttgctagtcagagttaacaatggatgg
caatacttagcacttggaacacttttgcctattacaacgccagcaccaccgaccacggca
ccgccgccggcaaatccacctttcgaagcatccaacttgattaaccagataccggtaaaa
gccgatggaatagggtggtatccgcgaatgctgcggatggctgctctgaacgagccgttt
accggagatatgcacggcactcgaggagctgactacgcttgttatcgcgaagccaggcgg
gcaggcttgagaggtaccttccgtgctttcctgagctctcgagtgcaaaacgtcgacagc
atcgtcaggctaggagatcgcgatcttcccatagttaacataaagggtgacgtgctgttc
aattcctggaaggaaatgttcaacggaaacggagcgtacttctctcagaatcccaggatt
tacagcttcaacgggaagaatatccttaccgatttcggatggcccgataaagtcgcgtgg
cacggctcgcacaagctcggcgatcgcgcgatggacacttactgcgatgcctggcactcg
agcagctcggatcgctacggattgggctcgccgttgaccggtggtcggctcctggaacaa
gtgcgctactcgtgcgacaataaattcgctctgctctgcatcgaagtgtcgagcgaggtg
ataaggagacgaaggagcatcaaccaacgaccgaacgacgacgtcgaaatgacggagaac
gattacatcgagtacttggaggagctcgtgcaatattga
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