Ooceraea biroi (clonal raider ant): 105279588
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Entry
105279588 CDS
T05778
Symbol
obe
Name
(RefSeq) activating signal cointegrator 1 complex subunit obelus
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
obo
Ooceraea biroi (clonal raider ant)
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
obo03400
]
105279588 (obe)
Enzymes [BR:
obo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
105279588 (obe)
DNA repair and recombination proteins [BR:
obo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
105279588 (obe)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
ResIII
Helicase_C
ASCC3_N
AAA_22
Helicase_PWI
AAA_19
Baculo_LEF-11
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
105279588
NCBI-ProteinID:
XP_011337758
LinkDB
All DBs
Position
13:2363343..2377561
Genome browser
AA seq
2122 aa
AA seq
DB search
MPQLPRITRSLRMFTSLERRQGTSDFKPNDLLKKRREWVKESKSNFDWHTICDRASEDLT
VYLRKFRDVVQRALVGVPPNVVNDFALYALRLLIEDKELTRRKFNMLGQKSGHITYELAL
LMMNIVQEIKANCYDEAIELLSESKENVDVDASSFHGFGANIPYNQAKVVWPDTTGLHNM
SEGTNSSTDKFTMMIHETKPSVQKKSIFDKTIFTKELKSCHEQCNTKMSYQDFSTRILNE
LKNSQNIQVDLLDLLGFEHFDFIQYIIEHQKIIVSTYLKTNQIKRPQASPGGPIISGQVI
VQSEVEKLLCKQVRKEEKKLNKLASKRDAKSEAEEGEFEPAELRLKRQEAFAAMHTPLFP
RKHTLERGMQESYPFVFDSTASVKQSIVSGQKILLTEDVKRENSELCEEVHIPVPKQEPV
NIEMQPVSIASLDDIGRMAFSGVTSLNKIQSIVFNAAYNTNENLLICAPTGAGKTNVAML
TVVHQLKQNIQDGQLQISQFKIVYVAPMKALAAEMTANFSRRLGPLGVCVRELTGDMQLT
KQEIQQTQMIVTTPEKWDVVTRKGTGDISLTSIVRLLIIDEVHLLHGDRGPVVEALVART
LRQVESSQSMIRIVGLSATLPNYVDVARFLRVNPHKGLFYFDHRFRPVPLSQTFVGVKAA
RPLQQMNDMDLVCYNKVIDMVRQGHQVMVFVHARNATVRTANFLRDAASKNDTLRYFLSD
AQAKYVNKAFAKSRNKHLGELFNNGLSVHHAGLLRSDRNLIEKYFADGLIKVLVCTATLA
WGVNLPAHAVIIRGTEIYDSKHGSFVDLGILDVLQIFGRAGRPQFDTSGHAVIITSHDKL
SHYLSLLTNQIPIESSFITYLADNLNAEIALGTISSVAEAVEWLSYTYLFVRMRLNFQAY
GMVHQTLLEDFNLEKRRRELVDVAAKALDKAQMIRYDVRTGDLGVTDLGRIASHYYLKYD
TVEIFNELNKPIMTEAQILAMISRAQEFEQLKVRDDEVDELDQLLQDCELTAQGGAENVH
GKVNILLQTYLSRGRVNTTSLISDQAYVTQNAVRIARALFEIALRRNNAVMAGRLLRVAK
MFEAQQWDFVTPLRQFDCLPMEVLDKIEQRDFSVHRLQEMDVKEIGSALRDQRAAALVKK
CCDELPALEMEYNLQPITRTVLRIRLKLIPRFRWNDKVHGKNSQAFWIWIEDPDHNLIYH
HEYFMLTKKMVCQRLEQELVITIPLSEPLPTQYLVKATSDHWLGCEAVCPLTFRNLILPE
THPPHTDLLELQPLPVTVLRDPAFQSLYNFTHFNPIQTQIFHCLYHTDNNVLLGAPTGSG
KTIAAEIAMFRVFKQYPDQKVVYIAPLKALVRERINDWKMRLENNLQKKVVELTGDVSPD
IKIIAGASVIVTTPEKWDGISRSWQTRSYVQKVALIVIDEIHLLGEDRGPVLEVIISRTN
FISSHTQKKVRIVGLSTALANAIDLANWLGIKDMGLYNFRPSVRPVPLEVHISGFPGKHY
CPRMATMNRPTFQAIRQHAPKSPSLVFVSSRRQTRLTALDLIAFLAAEDEPKQWLSMPEE
QMNNILENIKDSNLKLTLAFGIGLHHAGLQDRDRKTVEELFVNNKIQVLITTATLAWGVN
FPAHLVVIKGTEYYDGKLKRYVDMPITDVLQMMGRAGRPQFDNSGVAVVLVHDLKKSFYK
KFLYEPFPVESSLMGVLSDHINAEIVAGTIKNKQEFLDYLTWTYYFRRLMKNPKYYDLDV
LEPECINQYLSLLVETTIRSLIDSHCIDSDEDEQSLISLPMGKIASFYYLSHKTMLMFTQ
SLRENMTLDQCLRILCQAHEYNELPVRHNEELLNEELAQLCRYPVDQYTYDSPHTKAFLL
LQAHFSRLPLPCTDYITDLKSVLDQAIRIIQAMIDTVAERGWLTSTLRIMQLFQMIVQAR
WVDESAITTLPYIRKEDLHLFASLSFVLPVLCSVTCNDYSKLAKVLCKDYQEDQIREMHQ
VMRDMPVISVDLTLDSSWNEDAEKKRIKLKRNNDSPPAVRRAEECTLIIGLKRMNNSRTL
KAHCPMFLKGKDESWFLVLGDIQNKEVWALKRVSGVNSQQRYHQLQFTAPSRLGPLKLTF
YLISDCYIGLDQQYSICLSVTP
NT seq
6369 nt
NT seq
+upstream
nt +downstream
nt
atgccacaactaccacgtatcaccaggtccttacggatgttcacctccctagaacgtaga
caggggacgtcggattttaaaccaaatgacttgttaaaaaaaagacgagaatgggtaaaa
gaatccaagagcaattttgattggcatactatatgtgacagagcgtctgaagatcttaca
gtgtatttacgtaaattcagagatgttgtgcaacgagcgttagtgggtgttcctccgaat
gttgtaaatgatttcgcactttatgcattacgtttgttaatcgaagacaaagaattaaca
cgaagaaaatttaacatgcttggccaaaagtcggggcacatcacgtatgagctcgcactt
ctcatgatgaatattgtccaagaaattaaagcgaactgttacgacgaggctatagaactc
ttatcggaatccaaggaaaatgtggatgtcgacgcttccagttttcacggtttcggcgca
aacattccctataatcaggcaaaagtcgtgtggcctgataccactggacttcacaacatg
tcagagggaacgaattccagcaccgataaatttaccatgatgatacatgaaacgaaacct
tcggtacaaaagaagtctatatttgacaaaacaatatttacaaaggaattgaaaagttgt
cacgagcagtgtaataccaaaatgtcatatcaggatttttccacgagaatattgaacgaa
ttaaagaattcgcaaaatatacaagtcgacctattggatctgctaggtttcgagcatttc
gactttattcagtacattatcgagcatcaaaaaatcattgtgtcaacgtacttaaagaca
aatcaaatcaaaagaccgcaagccagtccaggaggacctataatcagtggtcaggtaata
gtacagtccgaagtggagaagctgttgtgcaagcaagtacgtaaggaggagaagaagttg
aataaactggcgagcaagcgagacgccaaatcagaagctgaggagggtgaattcgaacct
gccgagctgcgactcaagagacaggaagcgtttgcagctatgcacacgccgctgtttccc
agaaagcacaccctggagcgtggtatgcaggaatcgtatcccttcgttttcgattccaca
gcgagcgtgaagcagagcatagtgtcggggcaaaaaatattattaaccgaggatgttaaa
agggagaacagtgaactttgcgaggaggtgcacataccggtaccgaagcaggaacccgtt
aacatcgagatgcagcctgtgtcgatagcctctctggacgatattggtcggatggctttc
agcggcgtaacgtcgctgaacaaaattcagagtatagtcttcaacgcggcgtacaacacg
aacgagaacctgttgatctgcgcgccgaccggcgcgggaaaaacgaacgtggcaatgttg
accgtggtgcaccagttgaagcagaacattcaggacgggcaattgcagattagccagttc
aagatagtctacgttgcgccgatgaaagccctggcggccgaaatgactgcgaattttagc
aggagactcggtccgctgggcgtgtgcgtccgcgagctgaccggcgacatgcagctgacg
aagcaggagattcagcagactcagatgatagtgaccacgccggagaagtgggacgtcgtg
acgcggaagggtaccggcgacatctctctcaccagcatcgtcaggctactgatcatcgac
gaggtgcacctgctgcacggagatcgagggcccgtggtagaggcgctcgtcgcgaggacc
ctgcgccaggtggagtcgtcgcaaagcatgatcaggatagtggggctgtcggcaacgctg
ccgaactacgtggacgttgcccgatttctgcgcgtcaatccgcacaaggggctgttctac
ttcgaccaccgctttcgaccggtgcctcttagccagaccttcgtcggcgtgaaagctgcc
agaccgctgcagcagatgaacgatatggacctcgtgtgttacaacaaggtcatagacatg
gtgcggcagggtcatcaggtcatggtgttcgtacacgcgcggaacgccacggtgaggacg
gcaaacttcctgagggacgcggcctcgaagaacgacacgctcaggtacttcctgtcggac
gcgcaggccaagtacgtgaacaaggcgttcgccaagtcgcgtaacaagcacctcggtgaa
ctgttcaacaacggattgtcggtacatcacgccggtctcttgcgttcggacagaaatctg
atcgagaagtatttcgccgacggcttgatcaaggtgctggtgtgcaccgccacgctagcc
tggggcgtgaatttgccggcgcacgcggtcatcatacgaggaaccgagatctacgactcg
aagcacggctcgttcgtggacctgggaatactggacgtgttgcagatcttcggccgcgcc
ggcaggccgcagttcgacacgtcgggccacgcggtcatcatcacgtcgcacgacaagctg
tcccattacctatcgctgctgacgaatcagataccgatcgagagcagcttcatcacgtat
ttggccgacaacctgaacgccgagatagcactgggcacgatatcgagtgtggccgaggcg
gtcgagtggctgagctacacgtacctatttgtgcgaatgagattgaactttcaggcgtac
ggcatggtgcatcagaccttgctcgaagattttaatctggagaaaagacgcagggagctc
gtggacgttgccgccaaggcgctggacaaggcccagatgatcaggtacgacgtgcgcacc
ggtgatctcggcgtaaccgacctgggacgtatcgcgagccactactacctcaagtacgac
actgtcgagatcttcaacgagctgaacaagccgataatgaccgaggcgcagattctggcg
atgatatcgcgcgcccaggagttcgagcagctcaaggtgcgcgatgacgaggtggacgag
ctggaccagttgctgcaggactgcgaactcacggcgcaaggcggtgcggagaatgtccac
ggcaaagtcaacatactcttgcagacgtacctgtccagaggccgggtgaacacgacatcg
ctgatatccgatcaggcgtacgtcacgcagaacgccgtgcgaatagctagggcgctgttc
gagatcgcactcaggcgcaacaacgctgtgatggctggacgactgctgcgggtggcgaag
atgttcgaggcgcagcagtgggacttcgtgactcccctgcgccaattcgactgcctcccc
atggaggtgctcgacaagatcgagcaacgggatttcagcgtccaccgattgcaggagatg
gacgtgaaggagattggcagcgccctgcgggaccagcgtgcggcagcgttggtgaagaag
tgctgcgacgagctgcccgcgttggagatggagtacaatctacaacccatcacgcgcacc
gtcctgagaatacgactcaagttgatcccgcggttccgttggaacgacaaggtccacggg
aagaattcgcaagccttctggatatggatcgaggatccggatcacaatctcatctatcat
cacgagtactttatgctgacgaagaagatggtctgccaacggctcgagcaggagctcgtc
atcaccataccgttgtcggaaccgctgccgactcagtacctggtgaaagctacgagcgac
cactggctcggctgcgaagccgtgtgtccgttgaccttccgcaatctcatcctaccagag
acgcatccgccgcacacggatctgttggagctgcagcccttgcccgtaaccgtcctgagg
gatccagctttccagagtctctacaatttcacccactttaatccaatacagacgcagatc
tttcattgtctgtatcacacggataacaacgtccttctcggcgcgccaaccggctccggg
aagacgatcgcggccgagatcgccatgttccgcgtcttcaagcagtatcccgaccaaaag
gtcgtttacatcgcacccctgaaagccctagtcagagagcgcataaatgactggaaaatg
cggctggagaacaatttgcagaagaaggtggtggagttaaccggagacgtgtcgcccgac
ataaaaatcattgccggtgcgagcgtgatcgtcacgacgcccgagaagtgggacggtatc
agtaggagctggcaaacgcgaagctacgtgcagaaggtggcgcttatcgtgatcgacgag
attcacctgctaggcgaggatcgcggaccggtgctggaggtgatcatctcgcggaccaac
ttcatatcgtcgcacacgcagaagaaggtgaggatcgtgggattgtcgaccgcgttggcc
aacgcgatagacctggccaactggctcggcatcaaggacatgggactctacaatttccgt
ccatccgtgagacccgtgccgctggaagtgcacatcagcggattccccggcaagcactac
tgtccccgtatggcgaccatgaacagaccaactttccaggctatcaggcaacacgcgccg
aaaagtccctctctggtgttcgtgtcctcgcgtagacagacgcgcttgaccgctctcgat
ttaatcgccttcctcgcggcggaggatgagcctaagcaatggttgagcatgccagaggaa
cagatgaacaatattcttgagaatataaaagactcgaacttgaagctcacactcgctttc
ggaatcggtctgcatcacgccggtcttcaagatagagataggaaaaccgtcgaggaacta
ttcgtcaataacaaaattcaggtattgatcacgacggccactttagcctggggcgtcaac
ttcccggctcacctcgtggtgataaaaggcacggaatactacgacggtaaattgaaacgt
tacgtggacatgccgataacggacgtcttacaaatgatgggtcgcgctggcaggccgcag
ttcgacaactctggcgtggcggtcgtcctcgtgcacgatttgaagaaaagcttctacaaa
aaattcttgtacgaaccgtttcccgtggaatctagcctgatgggagtactatccgatcac
attaacgcggagatcgtcgccggtaccataaagaataaacaagaatttctcgattacctg
acgtggacctactacttccgaagattgatgaaaaatccgaaatattacgatctcgatgtc
ctggagcctgagtgcatcaatcagtacttatcactgttggtggagaccaccataaggtcg
ttaatagattcacattgcatcgattccgacgaggatgaacaaagtctaatttcactgccg
atgggaaagatagcgtcgttctattacttgtcgcacaagacgatgctaatgtttacgcaa
tcgctgagagagaacatgacgctggatcagtgcctccgcatactctgccaagcacacgag
tacaacgaattacctgtgagacataacgaggaactgttaaatgaagagttggcacaattg
tgccgttaccccgtggatcagtacacctacgactcaccgcacacgaaagcattcctcttg
ctgcaggcgcatttttcaagactgccattaccatgcaccgattacattactgatctcaaa
tcggtgctcgatcaagcaatcagaataatacaggcaatgatcgacacggtcgcggaacgc
ggatggctaacaagcacgttaagaataatgcaactgttccaaatgatcgtacaggcacga
tgggtcgacgaatcagcgatcacgacgttaccgtatataagaaaggaggacctgcacttg
ttcgcatcgttgtcgttcgttcttccggtgttgtgctccgtcacgtgcaacgattacagc
aaactcgcaaaagttttatgtaaggactatcaggaagatcaaatacgcgagatgcatcaa
gtgatgagggatatgccggtaatatctgttgatttaacgctagacagttcctggaacgag
gatgccgagaagaagagaataaaattgaaacgcaataacgacagccctccagctgttcgg
cgagccgaggaatgcacattaatcatcggactgaagagaatgaataattccagaacatta
aaagcgcattgtccaatgttcctaaaggggaaagacgagagctggttcctggtgctaggt
gacatccagaataaagaagtctgggctctgaagagggtgtccggtgtaaacagtcagcag
aggtaccatcagttgcaattcaccgcacctagtcgcttgggaccgctgaagctgacgttc
tacttgatttcggactgctacatcggtttggatcagcagtacagtatctgcctaagtgta
acaccttga
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integrated database retrieval system
