Ooceraea biroi (clonal raider ant): 105279756
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Entry
105279756 CDS
T05778
Name
(RefSeq) RNA-binding protein squid isoform X1
KO
K03102
squid
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo04320
Dorso-ventral axis formation
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09150 Organismal Systems
09158 Development and regeneration
04320 Dorso-ventral axis formation
105279756
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obo03019
]
105279756
03041 Spliceosome [BR:
obo03041
]
105279756
Messenger RNA biogenesis [BR:
obo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
105279756
Spliceosome [BR:
obo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
105279756
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
RRM_3
SET1_RBD
RRM_DEAH11
Motif
Other DBs
NCBI-GeneID:
105279756
NCBI-ProteinID:
XP_011338049
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All DBs
Position
7:12325676..12336278
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AA seq
338 aa
AA seq
DB search
MADQENKDFSEDIAEQNFAEQNGEAENGGADGDAMENNQESQEERSTGANQDSLNDRKLF
VGGLSWETTDKELREHFSTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKIMSAGDH
VINNKKVDPKKAKARHGKIFVGGLSTELSDEDIKNFFSQFGTIVEVEMPFDKTKNQRKGF
CFITFESEQVVNELLKTSKQTINGKEVDVKKATPKSDGMIGMRGGPGGRGGRGGRGGRGR
GFGQGGWGQGGYGGGYGGGYSQGGYGGGYDGYGYDYYGGGGYGGYGGYDYSGYDGYGYGG
GSYDGGYSGGRGGARGKGGSGYGGKQRGGRQNQRHQPY
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggccgatcaggagaacaaggatttcagtgaagatatcgcggaacagaacttcgcggag
cagaacggcgaggccgagaacggcggtgccgacggcgacgcgatggaaaataaccaggag
tcgcaggaggagaggtcgaccggggctaaccaggattctctgaatgataggaaattattt
gttggcggtttaagttgggaaacaactgacaaggagctgagagaacatttcagcacatat
ggcgatattgaaagcataaatgtcaagacagatcctaatacaggacgatcgagaggattc
gccttcattgttttcgctaaggctgaatctctcgacaagattatgtcggctggtgatcac
gttatcaataacaaaaaggtagatcccaagaaggcaaaggcacgacacggtaaaatattt
gtcggcggtctctcgacggagctctccgacgaagatatcaagaatttcttctcgcaattt
ggaaccattgtcgaagtggagatgccgttcgacaaaacgaagaatcagaggaaaggattc
tgcttcatcaccttcgaatctgagcaggtggtgaatgagctactgaaaacttcgaagcaa
acgataaacggtaaagaggttgacgttaagaaggcaacgccaaagtctgatggtatgatc
ggtatgcgcggcgggcccggcggtcgtggcggtcgtggcggcagaggcggtcgcggtcgt
ggtttcggccaaggaggatggggtcaaggtggctatggcggcggctacggcggcggctac
agccagggaggatacggcggtggctacgatggatacggatacgactattacggtggtggt
gggtacggaggttacggcgggtacgactacagtggatacgacggatatggctatggcggt
ggtagttacgatggtggctacagtggtgggcgcggtggtgcacgcggtaaaggaggctca
ggctatggcggcaagcaaaggggtggtcgtcagaaccagaggcaccagccttattaa
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