Ooceraea biroi (clonal raider ant): 105279804
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Entry
105279804 CDS
T05778
Name
(RefSeq) transcription initiation factor TFIID subunit 6
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105279804
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
obo03021
]
105279804
03036 Chromosome and associated proteins [BR:
obo03036
]
105279804
Transcription machinery [BR:
obo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
105279804
Coactivators
SAGA/TFTC/STAGA complex
105279804
Chromosome and associated proteins [BR:
obo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
105279804
STAGA complex
105279804
TFTC complex
105279804
SAGA complex
105279804
SLIK complex
105279804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
OapC
Motif
Other DBs
NCBI-GeneID:
105279804
NCBI-ProteinID:
XP_011338140
LinkDB
All DBs
Position
7:complement(11966171..11970553)
Genome browser
AA seq
640 aa
AA seq
DB search
MSENESMYGTTLSQESIKVIAESIGVGNFPDEAAKELAEDVSYRLKEIIQDAAKFMRHGK
RQRMNTHDIDHALKIKNIEPTYGFFAKDHTPFRFASGGGRELHFVEEKEIDLNEVVSMAG
GQTYPKLPLEIVLRAHWLCIDGVQPTIPENPPPVSQDAQKLESVDPTSKLSNKNQNIGVG
IPGGGGKSQKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEARRAEALQSLSAD
PGLHEMLARMCTFIAEGVRVNVVQKNLALLIYLMRMVKAMLDNPSLYLEKYLHELIPSVA
TCIVSRSLCVRPEIDNHWALRDFAARLLVQICKNFNTTTNNVQTRVTRMFSLALAKNNQT
PLMSLYGAIEGLCEFGPEVIKALVIPKIKLISERIESCIEGQGLPSVDKNAAGHIKTLLV
KSVAPVLKTTRSPPDYVEEYRQDYGYIGPALCAAVAKARTQPTVLATTAATTTALTTNQQ
QGSNCTGKTLVQAVSSTPGQQTTGRTIMLGASRTAGGAATTGGQKFVILQSRSQTSTATN
INTNISTGTIQQQQQSQQQQSQQQPQQQQVKLAQATIGQQKAHVQTSAPKLVVVCMPTSS
HTNSSVTQQANLTTKTQNVFVTTQQSVERSLSPEEEHSFQ
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagaatgagtcgatgtacgggacaacgttgtctcaagaatccattaaagtcata
gcggagagcatcggcgtcggcaatttcccggatgaggctgcgaaggaacttgcggaggat
gtcagttacagattgaaggaaattattcaggatgctgcaaaattcatgagacatggaaaa
cgtcaacgaatgaacactcatgacatagatcatgcgctaaagatcaagaacattgagccg
acgtatggattctttgctaaggatcacacgccattccgctttgcatcaggcggtggtagg
gagttgcatttcgtggaggagaaggaaatcgatcttaacgaagttgtgtccatggccggt
ggacaaacgtatcccaagctacctctagaaattgtactgagggcccattggctgtgtatc
gatggggttcaacccaccataccagaaaatccaccgccagtgtcgcaagatgctcagaaa
ctggagagcgtggatccgacgtcgaagctcagcaataagaatcagaatatcggcgtcggc
attccgggtggtggcggcaagagtcagaagctacggaacgtggagaccgtccacgtgaag
cagctcgcgacgcacgagctcagcgtggaacagcagctgtattacaaggagataactgaa
gcatgcgttggctctgacgaagcacgcagggctgaggcacttcaatcgctctcggcggac
ccgggtttgcacgagatgctggcgcgtatgtgcaccttcatcgcggagggcgtgcgggtc
aacgtagtgcagaagaatttggctctgctgatctatctcatgcggatggttaaagctatg
ctcgacaatccgagtctctacctggagaaatatctccacgagttaataccatcagttgca
acgtgcatagtatctcgatctttgtgcgtaagacctgaaatagataatcactgggcatta
cgagactttgctgctcgactcttggtgcagatatgcaaaaatttcaacactaccacgaac
aacgtgcaaaccagggtcacgcgtatgttcagtctagcattggcgaagaacaaccagacg
ccgctaatgtcgctgtacggagccatcgagggcctctgcgaattcggtccagaagtaatc
aaggctttagtaatcccgaagattaaattaatatccgagcggattgaatcgtgcatcgag
ggccagggactacccagtgtggacaaaaatgcagccggacatattaaaactctacttgtg
aaatcggtcgcgccagttttgaaaacgacacggtcaccgccggattacgtggaggaatat
agacaagattacggatatataggcccggcattgtgcgccgcggtcgcgaaagctcgcacg
caaccgactgtactagcaaccactgcagcgacgaccacggcactgaccacgaatcagcaa
caaggctctaattgcacggggaagacgcttgtgcaagcagtgagttcgactccgggacag
caaacgaccggtcgcacgattatgcttggcgcaagcaggactgctggcggagctgccact
accggcgggcagaaattcgttattttacaatcacgctcgcagacatccaccgccaccaat
ataaataccaacataagcaccggcacgatccagcagcagcaacagtcacagcaacagcag
tcacagcagcagccacagcagcagcaagttaaattggcgcaagcgactatcggccagcag
aaagcacacgtacagacttctgcgccgaaactggtcgtcgtatgcatgcccaccagcagt
cacaccaattcatcggtgacgcagcaagcgaatctcacaacaaaaacacaaaatgtcttc
gttaccactcaacagtctgtcgaacgatcgctcagtcctgaggaagagcactcatttcag
taa
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integrated database retrieval system
