Ooceraea biroi (clonal raider ant): 105279817
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Entry
105279817 CDS
T05778
Name
(RefSeq) transcription factor Sox-19b
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
obo
Ooceraea biroi (clonal raider ant)
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
obo03000
]
105279817
Transcription factors [BR:
obo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
105279817
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
Motif
Other DBs
NCBI-GeneID:
105279817
NCBI-ProteinID:
XP_011338161
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Position
7:complement(11468455..11493532)
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AA seq
389 aa
AA seq
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MRAGGSMCDGSFTETLRSMQGMTGASPPGGTGVNPMGVGLGSPLVPAGKKVQVEHIKRPM
NAFMVWSRLQRRKIAQENPKMHNSEISKRLGAEWKLLTEDEKRPFIDQAKRLRAQHMKEH
PDYKYRPRRKPKTLRKEGYPYSIPYPSVPMDALRAGMAGSMGQAGMGSYYSPAAAYGSIS
AASMAAAAAAAAQQSAAMSGLAAPAQVVSSMDAMKYSMEADKYRAAYMPPSTLAMSMYPD
PKYLDSNPKTYLDRSYLVDSAKAYFEQSKLYMDQKPTIVDYNRPSYEPNKLYEESSPNSV
IGGNGSTRSPAAESPDTSKQHERTEQASSSASSTSTSSAASPGATLPTYYSGPVQASGLL
APQMGQYGGYQAAPTPGNESFRRPLTVIF
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgagagccggcggcagcatgtgcgatggttccttcacggagactctgcgtagtatgcag
ggaatgacgggagcgtcgccaccgggtggtaccggtgtcaatcccatgggggttggcctc
ggtagtccgcttgtcccagcaggcaagaaagtgcaggtggaacacattaaacggccgatg
aatgcctttatggtctggtcacggctacaacgacggaagatcgcgcaagagaatcccaaa
atgcacaacagcgaaatctccaagaggcttggtgccgaatggaaactcctcacagaagat
gagaaacgcccgttcattgatcaggcaaaaaggttacgtgcccagcatatgaaagaacat
ccggattacaagtacagaccacgaagaaaacccaagactctgcggaaagaaggctaccct
tacagcatcccatacccaagtgttcccatggatgctcttcgagccggtatggctggtagc
atgggacaagcaggaatgggctcttattacagtcccgcggcggcctacggctctatctca
gcagccagcatggccgcggccgcggctgcggccgcacaacagtcggccgccatgtctggt
ctcgcggcacctgctcaggtggtgagctcgatggatgccatgaaatattccatggaagct
gacaagtatcgcgccgcctacatgccgcctagtactctggcgatgagtatgtatccggat
cccaagtacctggactcaaaccctaaaacctatctggaccggagttacctagtggactcc
gcgaaggcgtacttcgagcaatccaagctttacatggatcagaaacctacgattgtcgac
tacaaccggcccagttatgagcctaataagctgtacgaagaatccagcccaaacagcgtc
atcggcggcaatggatccactcggtcaccggctgcagagtcgcctgacacgagcaaacag
catgagagaacagaacaagcctcgtctagcgcgagctcaacatcgacgtcatcagctgca
agtcccggcgcgactctcccgacatattattccggaccagtccaagccagtggtttattg
gccccacagatgggacaatacggtggataccaagcagcgcctacaccgggaaacgaatcc
tttcgccgaccattgacagtcatcttctga
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