Ooceraea biroi (clonal raider ant): 105279854
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Entry
105279854 CDS
T05778
Name
(RefSeq) low-density lipoprotein receptor-related protein 6 isoform X1
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo04150
mTOR signaling pathway
obo04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
105279854
04150 mTOR signaling pathway
105279854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
obo04131
]
105279854
Membrane trafficking [BR:
obo04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
105279854
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
EGF_LRP2
SGL
DUF5050
Vgb_lyase
cEGF
PRKCSH-like
Motif
Other DBs
NCBI-GeneID:
105279854
NCBI-ProteinID:
XP_011338220
LinkDB
All DBs
Position
7:complement(11140867..11151152)
Genome browser
AA seq
1643 aa
AA seq
DB search
MAPALIASSVLFVACVLCCGIFSCNGSPIVLFATHKDIRMANVSRSNKFNIIVKDLSEGA
ALDFYYERGLICWSDSNMEMIHCVQSNGTHTGERMTVVNSSLISPDGLACDWYTGKLYWT
DGEKNRIEVTSIDGRHRKVLFWTDIYQPRAIVLAPMKRIFFWTDWGDVPKIERASMDGDQ
SSREVIVSEDIFWPNGLTVDYENELIYWADGKLRFIAVMDYYGRNRRTLVSQGLDYPFAV
TFFDNRLYWTDWKTWCIHSYDMRQAQPHPRELFHGEYIPGDIKVWDARKQPYGDNPCRRN
NGNCSHLCLLSANERGYSCACPTGVKLIDNYTCAKGPEELLLIVQRTEICRISLDSPDYT
NFVLPLNGVKHAIAIDFDPVDEMLYWTDEQAYAIRRASLDGSNQQDVINTEVYEVANPDG
IAIDWIARNLYWTDTGTDRIEVARLNGTSRRVVVNEDLVEPRAIAVAPEYGWMFWTDWNE
KRPKIERSNLDGSGRVQLITKDIVWPNGIALDLERRKIYWCDAKTDKIEVSNMDGTDRRE
VITDNLPHLFGLTLLGDYLYWTDWQRRSIDRAHKLTGGDREVIVDQVPNVMGVKAVHLGR
PTASNSPCGNNNGNCSHLCFNRPGNKYVCSCQIGYELTKDTRTCIVPDAFLLFTKRENIG
RISIENANTDSIIPVTGVKEATSLDFDIADSRIYWTDVKLKAISRAFINGSDLERLVDLG
LETPEGIALDWIAHNLYWTDTSMHRIEMIRLETGSRRVLVWQNLYEPKCVALAPEQGYIY
WTEWGGTGTIERALLDGTQRQVVLAHIGRANGLTIDYSTQRMYWADLSTPGIDSYDFLTR
RRNMIISRDVVYPFSVTQYRDNIYWTDWNTGDIERANKFTGANRTRIHNRLESVTDLHVF
HSSRQTGWNPCAVANGNCSHLCVALPGPHANSTSTSHRCACPTHYTLARDNRTCIAPRHF
MIYSMRNAMARYLPDQADDCADVVMRVPGLKNARAIEFDPVTRHVYWIDGRTMSIRRAFE
NRTQQQQQHSSTVVVSTGGSGHPFDLALDPLGRLLFWTCTANDAVNVTRLDNGSALGVVV
KGDGEKPRNIAIHSRQRLLFWTDVGRKMRVMRSKMDGKDRHVIASELPEPLSSITVDTTT
NTVYWAYGKHIECSDFLGGNRKILVASATQHVPVTYLVVLFDYLYWYDRDTQVLERVNKT
TGASVKRSAIMSTSRAMMDIIAVNTPKDSVMEAHVCSPFNDYGGCSHFCVGTDDGVSTSP
RCSCPRTLVLSDDGRTCRAAPACGSDHFTCAAPSSAVAKDCIPVTWKCDGQSDCPDGSDE
LGCPACGRDQFKCQSHCIDMSWVCDGTTQCPDGSDEAHCCRAGQFQCIGNGVCISGTALC
DGWDDCADGSDELPPSCPGPHDSHRQDAGPRIGGEAGKMTYIIIILVAVLATTVFVLTYY
YCRRRFVGNEGLPDILHDSAGDPLSPKPNNNRVPKPMFVSQKNNRKDGGSGLKAGMEAVR
MSMLNGSSLGSSYDRSHITGASSSTRGSSAGGYPQETLNPPPSPATITSSTHCSSSNASR
YKPYRHYRSINQPPPPTPCSTDVCDESDSNYPARYRYESEPFPPPPTPRSVYHSDAAISC
PPSPSSRSSTYFSPLPPPPSPVP
NT seq
4932 nt
NT seq
+upstream
nt +downstream
nt
atggcccccgctctgatcgcaagcagcgtgttgtttgtcgcatgcgttttatgctgcggc
attttttcttgcaatggctcgcccattgtcttgttcgccactcacaaagatattagaatg
gcaaacgtgtcgcgcagcaacaagtttaatatcattgtcaaggatttatcggaaggcgcg
gcgttggacttctactatgaacgtggactgatctgttggtcggacagtaatatggaaatg
atacactgtgtccaatccaacggcacacacactggtgagcgaatgaccgtggtaaattcc
agtctaatatcgcccgatgggctcgcttgcgactggtacacgggcaaattgtattggacg
gacggtgagaagaaccggatcgaggtaaccagcattgacggccgccacaggaaagtgctc
ttctggacggacatttatcaaccgcgcgcgatagttctggcgccgatgaagaggattttt
ttttggactgattggggcgacgtgcccaagattgagcgtgcttccatggatggcgatcaa
agttcgcgcgaggtgatcgtctccgaagatatcttctggccgaacggtcttacagtcgat
tatgaaaacgaactcatttattgggcggatggtaaactgcgcttcatcgccgtaatggat
tattacggtcggaacagacgcacgctggtcagccaaggcctggactatccgttcgccgtc
acattcttcgataatcgactctactggacagattggaagacgtggtgcatccattcgtac
gatatgcgccaagcacagccgcatccacgcgaattgttccatggcgaatacatacctggg
gacattaaagtatgggatgcaagaaaacagccttatggcgataacccttgcagacggaat
aacggcaattgttctcacctatgtctgctcagcgcaaatgagcgtgggtatagttgtgcc
tgtcctacgggcgtcaaattgatcgacaattacacgtgcgcgaagggacccgaggaattg
ttgctgatcgtccagcgaactgagatttgccggatatcgctggactctcccgattacacc
aactttgtgctgcctctcaacggtgttaagcatgcgatcgcgatcgattttgatccggtg
gacgagatgctgtactggaccgacgagcaggcgtatgccatcaggcgtgcctccttggac
ggctcaaatcagcaggatgtgattaataccgaggtatatgaggtagcgaatcccgacggc
atcgccatcgattggattgcccgtaatctgtactggaccgacacgggtacggacaggatc
gaagtggctcgtttgaatggtactagtcgtcgggtggtggtgaacgaggatctggtcgag
ccacgagcgatcgcggtcgcgccggaatacggctggatgttttggaccgactggaacgag
aagcggccaaagatcgagcggagcaatctcgatggtagtggtcgagtccagctgatcacg
aaagacatcgtctggccgaacggcatcgccctcgacctggagcgcaggaagatttactgg
tgcgacgccaagacggacaaaattgaagtgtcgaacatggacggcaccgatcggcgcgag
gtgattacagataatttgccgcatctgttcggtttgaccctgctaggagactatctgtac
tggacggattggcaacgacgcagcatcgatcgggcgcacaagttaaccggcggtgatcga
gaagttatcgttgaccaggtgccgaacgtgatgggcgtgaaagccgtgcatctgggccgg
ccaaccgccagcaattcgccatgtgggaacaataacggcaactgcagccacctttgcttc
aacaggcctggcaacaagtatgtgtgttcctgccaaatcggttacgagctgaccaaggac
acgcgtacgtgtatcgttccggacgccttcctcctgttcaccaagcgagagaacatcggt
cggatcagtatcgagaatgccaacactgacagcatcatacctgtcactggtgtcaaggaa
gctacttctctggattttgatatagccgacagtcgtatctattggacggacgtcaaactg
aaagccatctcgcgtgcctttattaatggctcggatctggagaggctggtcgatctcggc
ttggagacgccggagggaatcgcgcttgattggatcgcgcacaatctgtactggactgac
actagtatgcacaggatcgagatgattagactggagactggcagtagacgggtcctcgtc
tggcagaatctatatgaacccaaatgcgtggcactagctcccgagcaaggctacatatac
tggaccgagtggggcggtacgggcaccatagagagggccttgctggacggtacgcagagg
caggtggtgctcgcgcacatcggccgggcaaacggcctgaccatcgactacagcacccag
agaatgtactgggcagacctatccacgcccgggattgactcgtacgacttcctaacgcga
cggaggaatatgatcatctcacgcgatgtcgtatacccgttcagcgttacgcagtaccga
gataacatctactggactgactggaacaccggggacatcgaacgagcgaacaagttcacc
ggggcgaatcgcaccaggatccacaacaggctcgagtccgtgacggacctgcatgtattc
cactcgtcacggcagaccggctggaatccatgcgcggtcgcgaacggcaactgcagtcat
ctgtgcgtcgcgctaccgggcccgcacgcgaacagcacgtccacgtcgcacagatgcgcg
tgtcccacgcattacaccctggcccgtgacaatcgtacatgcatcgcacctcggcatttc
atgatctacagcatgcgcaacgccatggcgcgttacttgccagaccaggcggacgactgc
gcggacgtggtgatgcgagtgcccggcctgaagaacgcacgggcaatcgaattcgatccg
gtgacgcggcatgtttactggatcgacggccgtaccatgtcgattcgccgtgccttcgaa
aaccggacgcagcagcagcagcaacacagcagcaccgtagtggtgtccaccggcggttcc
ggacacccgttcgaccttgcgctcgacccgctcggcagactgctcttctggacgtgtacg
gcaaacgatgccgtgaacgtcactcgactggacaacggttcggccctcggtgtcgtggtg
aagggcgacggtgagaagccacggaatatcgctattcattcgcgacaacggctgctcttc
tggacggacgtaggcaggaagatgcgggtgatgcgcagcaagatggacggcaaagatcgc
catgtgatagctagcgagctgccggaaccactgagcagtataaccgttgacacgacgacc
aacaccgtttactgggcgtacggcaagcacatcgagtgctccgatttcctgggcggcaat
cgcaagatcctggtagcctccgccacgcaacatgtcccagtaacgtatctggtcgttctc
ttcgattatctctactggtacgatcgcgacacacaggtgcttgagcgggttaacaagact
accggtgcgagcgtgaagcgaagtgcgataatgtcaacaagtcgcgcgatgatggacatt
atcgctgtcaacacgccgaaagactcggtcatggaagcgcacgtgtgcagtccgttcaat
gattacggtggctgctcgcacttctgcgtcggcactgatgacggcgtttcgacatcgcca
cgctgctcgtgcccgaggactctagttctatctgatgacggtcgcacttgccgcgcggct
cccgcttgtggaagcgatcactttacctgcgccgcgccgagctcggccgtggccaaggat
tgcataccggtcacgtggaaatgcgacggacagagcgactgtcctgacggcagcgacgaa
ttgggttgtcccgcgtgcggccgcgatcaattcaaatgtcagagccactgtatcgatatg
tcctgggtttgcgatggaacgacgcagtgtcctgatggttcggacgaagcacactgctgc
cgagccggacagtttcagtgcatcggaaacggcgtttgcatctctgggacagcgctatgt
gacggctgggacgattgcgccgatggtagcgacgaattaccaccgtcctgtcccgggccg
cacgattcgcatcgtcaggacgccgggccgaggatcggcggcgaagccggcaagatgact
tacataatcatcattctggtagcggtgctcgcaaccaccgtattcgtcttgacttattac
tattgccgcagaagatttgtcgggaacgagggtctacccgatatactgcacgactcagcc
ggcgaccctttgtcgccgaaacccaacaacaatcgtgtgccgaaaccgatgttcgtatca
cagaagaacaataggaaggatggagggagcggcctgaaggctggcatggaagccgtaagg
atgtccatgctgaatggcagcagtctcggttcgagctacgatcgcagtcatattacaggt
gcatcaagctctaccagaggcagctccgcgggtggatatcctcaggaaacgctaaatcca
ccgccaagcccagcgacgattaccagttcgacgcattgttcgagcagtaatgcgtcgcgt
tacaagccataccggcattacaggagcatcaatcaaccaccaccgccaacaccatgcagc
actgatgtctgcgacgagtccgacagcaattatccagcgcgttatcgctatgagagcgag
ccgtttccgccaccgccgactccgcgctccgtctatcatagcgatgccgccatcagctgt
ccaccatcacctagctccagatcatcgacatactttagtcccctaccgccaccaccgtca
ccggtaccctga
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