Ooceraea biroi (clonal raider ant): 105279890
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Entry
105279890 CDS
T05778
Name
(RefSeq) beta-1-syntrophin
KO
K24064
beta-syntrophin
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105279890
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GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_6
PDZ_2
BET
Motif
Other DBs
NCBI-GeneID:
105279890
NCBI-ProteinID:
XP_011338295
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Position
7:complement(9473295..9687781)
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AA seq
590 aa
AA seq
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MPVHTRKTRAPCEEIEMVELCGSGQASSAMGVMGIGSMVSAATSSSSSSTTTTTGASSSA
SGRAGVLETQVRGQWYRVFVSLEDDYLSISLDESCETGNNALNNGNINNNNVDSLNDPDV
PDSVANQKRIVRVIKSDNNGLGISIKGGKENKMPILISKIFKGMAADATEQLYVGDAILA
VNGEDLREATHDEAVKALKRAGKVVELEVKYLREVTPYFRKASIIQEVGWELQRGFLSAT
PPPPKSPPRADTRYLPLQLCRLTRSHPSSDPEGRILELHSPDGVHECWLRATDNTEANVW
FNALHSALAALTLKALRLASALPDPQQLQHIGWLARRHCLQNGRASSESSEDGAGSSAST
SRGAGSGFGLAGGCTGGWRSVFGAVSGRELRLYECAPWSPEAWASPSITCPLIATRLVSS
PTRQNEAASSSSGSTQHGATFAVRVGTMDGVVTHHLRAETRRDLAAWARAIVQGCHAVAH
SLREYTVRCTWQGKACQLVVNHEEGFALYSAGTRGSAGNGVSPGSPPTPLWRRSFDKLKM
SADDGARLLWLDFGGEDGEIELDLESCPKPIVFVLHNFLSAKIHRLGLSA
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtacacacgcgtaaaacgcgtgcaccttgcgaagaaatcgaaatggtggagttg
tgcggtagcggtcaggcttcttcggccatgggggtgatgggcatcggctcgatggtgtcc
gcggcgacatcatcctcctcttcctcgactaccacgaccacgggcgcctcgtcctcggca
tcgggacgcgccggcgtcctcgaaactcaggtgcgtggtcagtggtatcgcgtgtttgtt
tccttggaagacgattaccttagcatctcgcttgacgagagctgcgagaccggtaacaac
gccttgaacaatggtaacatcaacaacaacaacgtggacagtttgaatgacccggacgtg
cccgactcggtggccaatcagaaacgtattgtccgcgtgatcaagagcgacaacaatggc
ctcggaatatcgattaagggcggcaaggagaacaaaatgccgattctcatttcgaagatc
ttcaaaggcatggcagcggacgctactgagcagctttacgtcggcgatgccattttggca
gtgaatggcgaagatctacgcgaagctacacacgacgaagcggtgaaggcgctgaagagg
gccggcaaggtcgtcgaattagaagtaaagtatctgcgagaggtgacgccgtacttcagg
aaagcttcgatcatccaggaagtgggctgggaacttcagcgtggtttcctcagcgcgaca
ccgccgccaccaaagtcaccaccgcgggcggatactcgttatctgccattacaactctgc
agactcaccaggtcgcatccctcttccgatcccgaaggtcgcattttagagctacactcg
cccgatggtgtccacgagtgttggttgagagccactgataatacggaggcgaacgtctgg
ttcaatgctttgcactcggcgctggcagccctcaccttgaaagcattacgactggcctca
gcacttccggatccgcagcagcttcagcacattggttggcttgcgaggagacactgcctt
cagaatggacgagctagtagcgaaagcagcgaagacggcgccggaagcagcgcaagtact
tcgcgaggagccgggagcggattcggtcttgccggtggatgcaccggcggatggcgcagt
gtctttggcgcagtttcaggccgggaactcagactctacgaatgtgcgccctggagcccg
gaagcctgggcttcgcccagtattacctgcccccttatcgcaacacgactggtatcctcg
ccgacgcgacagaacgaggcggcgagcagcagcagcggctcgactcaacacggggcgaca
ttcgcggtccgggtcggcacgatggacggggtggtcacgcatcatttgcgagctgaaaca
cgaagagatctggcggcctgggcacgggcgatcgttcagggatgtcacgcggtcgctcac
tccttgcgggagtatactgtccgttgcacatggcaaggcaaagcctgtcagttggttgtc
aaccacgaagaaggattcgcgctttactccgcaggaacacggggtagcgccggaaacggc
gtgagtcctggatcgccgcccacgccgctctggagaagatccttcgacaaattgaaaatg
tccgcggacgatggcgcccgtctcctctggctcgatttcgggggcgaagatggtgaaatt
gagctcgacttggagagctgtccaaaaccgatcgtgttcgtcctgcacaactttctttcg
gcgaagatacatcgactcggtctgagcgcatag
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