Ooceraea biroi (clonal raider ant): 105279893
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Entry
105279893 CDS
T05778
Name
(RefSeq) sodium/calcium exchanger 1 isoform X1
KO
K05849
solute carrier family 8 (sodium/calcium exchanger)
Organism
obo
Ooceraea biroi (clonal raider ant)
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
obo02000
]
105279893
00536 Glycosaminoglycan binding proteins [BR:
obo00536
]
105279893
Transporters [BR:
obo02000
]
Solute carrier family (SLC)
SLC8: Na+/Ca2+ exchanger
105279893
Glycosaminoglycan binding proteins [BR:
obo00536
]
Heparan sulfate / Heparin
Others
105279893
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calx-beta
Na_Ca_ex
Na_Ca_ex_C
Motif
Other DBs
NCBI-GeneID:
105279893
NCBI-ProteinID:
XP_011338301
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Position
7:9721412..9766506
Genome browser
AA seq
877 aa
AA seq
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MSGNYSVRCEPGLVLPLWRPEDNLHLIDIIFRGLVYFFLLLYLFIGVSIISDRFMAAIEV
ITSQEKELVVRRQGKEQIVVVRVWNETVANLTLMALGSSAPEILLSIIEIWAKNFQAGEL
GPGTIVGSAAYNLFVIIALCVFVIPNGETRKIKHLRVFFVTATWSIFAYVWLYVILAVSS
PGVLEVWEGILTFSFFPATVLTAYVADRRLLLYKYLRKGYRMNKRGVIVQAEAGDSEVGV
ELEIKPQQDGLHGMVDRLADADTPEAREFEQTRRDYINTLKELRRRYPILPLEQLEVMAH
EEVLGKGPKSRAFYRVQATRKMVGAGNLSRKISERAQSDLSEVKAELQKAEAESIDIEHV
NAMRVFFEPGHYTVMENVGTFEVGVTRIGGDLSKPCRVDYCTEDGSAEAGSDYVSAKGTL
LFGPGETKRSIQLSVIDDELFEEDEYFYVKLSNVSKPAMLVSPSLATVMILDDDHSGIFG
FPERDVELVESVGHYPLRVVRYSGARGRVIIPYRTVEGTAKPGKQYVHTEGSLTFEDNQT
EKILGLEIIEEDSYEKDALFYVELGEPLLQGAARRDFLISAEAGLAVAAEMKKPEERTDE
EKMALLGKPRLGEVFRAQIRIKESKEFKNTVDKLVQRANASIILGTSSWKEQFTEALTVS
GGDEEDTEGGQPSSPSAMDYLMHSLTIFWKVLFAFVPPTDIAGGYLCFIVSILGIGVVTA
VIGDVASYFGCTLGIKDSVTAVVFVALGTSIPDTFASKVAACQDKYADACVGNVTGSNAV
NVFLGIGVAWSIAAIYRACHNEPFLVEPGNLAFSVTLFCSEACVVILVLLVRRVKSIGGE
LGGPFVPKVITSVFLFSLWLLYLIMSTLEAYGVIQGF
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggaactactcggtacgttgcgagccgggcctagtgctaccgctctggcgtcca
gaggataacctgcacctaatcgacatcatctttcggggcctggtgtacttcttcctgtta
ttgtacctgtttatcggcgtgtcgatcatcagcgaccgctttatggcggctatcgaagtg
attacgtcccaggaaaaagagctggtggtgcgtcgccagggcaaggagcaaattgtcgtg
gtgcgagtgtggaacgagacagtggccaatctcaccctgatggcgcttggcagcagcgct
cctgagatcctgctgtccattatcgaaatttgggcgaagaacttccaggctggtgagcta
ggcccgggtacgatcgtgggttccgccgcttacaatctcttcgtcatcattgctctgtgt
gtgttcgtgatacccaacggcgagacccgaaaaataaaacatttgcgtgtatttttcgtt
accgccacttggagcatcttcgcttacgtgtggctttatgtcatcctcgcggtctccagt
ccgggtgtgctggaggtctgggagggtatattgaccttctcctttttcccggctacggtg
ctgacggcttatgtcgctgatcgacgattattgctgtacaaatatctgcgcaaaggctat
cggatgaacaagcgaggtgtgatcgtgcaggcggaggccggggattccgaggtgggggtg
gagctggaaatcaagcctcagcaagatggtctccacggcatggtggaccgcctcgccgac
gctgacactcccgaagcgagggaattcgagcaaacccggcgagattacatcaacactttg
aaggaattacgcagaaggtacccgattctaccattggagcaattggaggtcatggctcat
gaggaggtgctgggtaagggccccaagagcagggccttctatagggtgcaagctacgaga
aagatggtgggcgccggcaatctcagtaggaagatcagcgaaagagcacagagcgacctc
agcgaagtcaaggccgagttacagaaagcggaagccgagagcatcgacattgaacacgtc
aacgctatgagggtgttcttcgaacccggccattacaccgtgatggagaacgtcgggact
tttgaggtgggggttactaggattggtggtgatctcagtaaaccctgccgtgtagattat
tgcacggaggatggctctgccgaggcgggatctgattatgtgagcgctaaaggcaccttg
cttttcgggcctggcgaaaccaagaggagtatccaactttcggttatcgacgatgaactg
tttgaagaggacgagtatttctacgtcaagcttagcaacgtatcaaaaccagcaatgctt
gtctcgccaagtctagcaaccgtgatgatcctggatgacgatcacagcggcatttttggc
ttccccgagagagacgtggaattagtggaaagcgtgggccattaccccctgcgagtcgta
cgttacagcggggcccgaggccgtgtcatcatcccttatcgcactgtcgagggtaccgca
aaacctggcaagcaatatgttcataccgaaggcagtctaacttttgaggacaatcagaca
gagaagatcctcggcttggagatcatcgaggaggattcgtacgagaaggatgctctcttc
tacgtcgaactgggcgagccgttgctacaaggagcagcaagacgcgattttctgatttca
gcggaggcaggactcgcggtggcggcagagatgaagaaacccgaagagagaacggacgag
gagaaaatggcgttgctgggtaaaccgcggctgggcgaggtgtttcgagctcagatcagg
atcaaggaatcgaaggaattcaaaaatactgtggataaactcgtccagcgagcgaatgcc
tccataatactcggcacaagctcttggaaggaacaatttacggaagcactaaccgtcagc
gggggcgatgaggaggacacggaaggtggtcaaccctcttcaccatcagcaatggattat
ctcatgcattcgctcaccatcttctggaaagtcctctttgcctttgttccgcccactgat
atcgccggtggttatctatgctttatcgtcagcatcctgggaataggtgtcgtgacggca
gtaatcggcgacgtcgcctcgtacttcggctgcaccttgggcatcaaagattctgttacc
gcggtagtcttcgtcgctcttggcaccagcattcccgacacttttgcgagcaaagtagcc
gcttgccaggacaagtatgccgacgcgtgtgtgggcaacgtgaccggaagtaacgcggta
aacgtcttcctggggatcggcgtcgcgtggagtatcgccgccatttatcgtgcttgtcac
aacgagccgttcctcgtcgaacccggcaacttggccttctccgtcaccctgttctgcagc
gaagcctgcgtggtgatcctggtgttgttggtgaggcgagtgaagtcaatcggcggcgaa
ctaggtggacctttcgtaccgaaggtcattacgtccgtgttcttgttttctctctggctg
ctctacctcatcatgtccactctcgaggcctatggcgtgatccagggcttttaa
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