Ooceraea biroi (clonal raider ant): 105279894
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Entry
105279894 CDS
T05778
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105279894
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obo03019
]
105279894
03016 Transfer RNA biogenesis [BR:
obo03016
]
105279894
Enzymes [BR:
obo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
105279894
Messenger RNA biogenesis [BR:
obo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
105279894
Transfer RNA biogenesis [BR:
obo03016
]
Prokaryotic type
tRNA degradation factors
105279894
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
Motif
Other DBs
NCBI-GeneID:
105279894
NCBI-ProteinID:
XP_026827302
LinkDB
All DBs
Position
7:9706577..9710285
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AA seq
769 aa
AA seq
DB search
MTVFRGFRLLKYHKFLFLDYINTCKNANTFYVKFNTASHTNVGTEIVTLSNGKQLSLSTG
KYARFADGSAVVSLGDTSVMVTAVCKSQPSSSSFLPLVVDYRQKAAAAGRIPTNFLRREL
GPTEREILTSRVIDRSIRPLFPQGFYFDTQITCNLLAMDGINDPDVIAINGASAALSVSD
IPWNGPIGAVRVGMINSDVLINPTRREIQDSTLNMIITATKQNLIVMIEGSANEILQQDL
KKVMKIGMKECQSIIAAITNLQKTCGKTKRKFVTDERQDDTLINTVKKLSETKVQDIFSD
YEHDKLSRDNAINKLSDDVITTLRKDNADLDITSAEKVFRNIVKDVFRRLILEKNVRCDG
RSLSDLRQISCQVDLFNPLHGSAVFQRGQTQVMCAVTLDSLESALKMDAVSMLISGVKEK
NFFLHYEFPPYATKETGHIGRVGRREMGHGALAEKALRPILPKDYPFTIRLTSEVLESNG
SSSMATVCGGSLALLDASIPILSPVAGVAMGLITKYNESNTDIEEYKILTDLLGIEDYLG
DMDFKIAGTKRGFTAFQADVKIPGIPLKIIMECINQATDAKTEIIKIMNKVIQTPRQTKK
DKMPVVEKLEVPIHQRGKFLGIGGTNLKKIFLETGVHIYPSDENTYSIFAPNETAMVEAK
EMIEALLQKDREPTLEFGAIYTAKIVEIREFGVMVTLYSNMLPALLPNSQLDQRKIHHPS
ALDLEVGQEIQVKYFGRDPVTGQIRISRKVLQEPVLISKTLHRDNAEKI
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgacagtgtttagaggttttaggttattgaaataccataagtttttatttttagattac
attaatacctgtaaaaatgcaaacacattttatgttaagtttaatactgcaagtcacaca
aacgttgggacagagattgttacgctgtccaatggcaaacagctcagcttgtctactggc
aaatatgcacgttttgctgatggtagcgcagtcgtgtccttgggagacacttccgtcatg
gtcacggcagtctgcaaaagccagccgtcatccagttcattcctaccgctagtcgtagat
tacagacaaaaggcagctgcagctggtcgcataccaaccaatttcttacggagggagctt
ggaccaacggaacgtgagattctcacgagcagagtcatcgatcggtccataaggccatta
ttcccacaaggattctactttgacactcaaataacatgcaatctgttagccatggatggc
ataaatgatcctgatgtgattgcaattaatggtgcttccgcagctctcagcgtttccgat
attccatggaacggtcccataggcgctgttagagtcggaatgattaacagtgatgttcta
atcaatcctacaagacgcgaaattcaagatagcacattaaatatgattatcactgcaact
aagcagaacctaatcgtcatgatagagggttcagctaatgagatattacagcaggacttg
aagaaggtaatgaagattggcatgaaggagtgccagagtatcatagctgcgataacgaat
ttgcaaaaaacatgtggcaaaacgaaaagaaaatttgtaactgacgaacgacaggatgat
actttgatcaatactgtgaaaaagctgtcagagacaaaagtgcaagatatcttctcggat
tatgagcacgataagctctcgagagacaatgcaatcaataagcttagtgatgacgttatc
acaacattgcgaaaagataatgcagacttagatattacgtcagcggaaaaagtttttaga
aacattgttaaggatgttttcaggaggttaattttggaaaagaatgtcaggtgcgacggt
cgttcattaagcgatttacgccagatatcgtgccaagtggacctctttaatcctcttcac
ggatcagctgtattccaaagaggtcagactcaagttatgtgcgccgtaactttggactct
ttggaaagtgcactcaaaatggacgctgtttcgatgttgatcagcggtgtgaaggaaaag
aatttctttctccattatgaatttccgccatacgcaactaaggaaacgggccatattgga
cgggtgggtcgtcgggaaatggggcacggtgccttagcagaaaaagccctacgaccaatc
cttccaaaggactatcccttcactataagactgactagcgaagttttagaatcaaatggt
tcttcttcaatggctaccgtctgtggtggaagtttagcattgcttgatgcaagtataccg
atattatcaccggtagcaggtgtggccatgggtcttataactaaatataacgaaagtaac
acagatatcgaagagtataagatcttgactgatttactgggaattgaggattatctcggt
gatatggatttcaagatagcaggtacgaagcggggattcaccgctttccaggcagacgta
aagataccgggcattccgctgaaaattataatggagtgtatcaatcaagcgacagatgct
aaaacagaaattattaaaattatgaacaaagtgatacaaacaccacgacaaactaaaaaa
gacaagatgccagtagtcgaaaagttagaagtcccgattcatcaaagaggaaaatttctt
ggaattgggggaacaaatctgaagaaaatatttttggaaactggagtgcacatatatcca
agcgacgagaacacctactctatatttgcgccaaatgaaactgcgatggttgaggcaaaa
gaaatgattgaagcccttctgcaaaaagatcgtgaaccgaccttagaattcggcgccatt
tacactgcaaaaatagtggaaattcgagaattcggcgtcatggtgacgctatattccaac
atgttgccggcattattacccaactcgcaattggatcaacggaaaattcatcatcctagc
gctttggatctcgaagttggccaagaaatacaagttaaatatttcggccgcgatccggtg
accggacagatcagaatatcacgaaaggtgttgcaggaaccagttttgatttcgaaaact
ctgcatcgtgataacgcggaaaaaatatga
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