Ooceraea biroi (clonal raider ant): 105279906 Help Entry 105279906         CDS       T05778                                  Name (RefSeq) DNA ligase 3 isoform X1   KO K10776   DNA ligase 3 [EC:6.5.1.1] Organism obo  Ooceraea biroi (clonal raider ant) Pathway obo03410   Base excision repair Brite KEGG Orthology (KO) [BR:obo00001]  09120 Genetic Information Processing   09124 Replication and repair    03410 Base excision repair     105279906  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:obo03400]     105279906 Enzymes [BR:obo01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      105279906 DNA repair and recombination proteins [BR:obo03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Short Patch-BER factors      105279906 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N zf-PARP DNA_ligase_A_C RNA_ligase Motif Other DBs NCBI-GeneID:  105279906 NCBI-ProteinID:  XP_011338325 LinkDB All DBs Position 7:9813780..9841716 Genome browser AA seq 1016 aa AA seqDB search MSSDVEEERQQEEKPFAVERAKTGRAKCKRCKCAIEKGEIRVAKYVTSFFSDGKLMPAWH HVTCMFEVFAKQRATTRRIDDPAEDVKGWEELSDDDKKVILDKLEELEKSFPAKVAKKPA TPRKAGGPSGSSLKKTTDQTPKKVTTIDKEKREEKDREERQKVPSKDDSFREFRRVCSNV ADVDAYTDKSAIIKRMFTQGSHGGGFKGDIVLWCKLLLPGAVKRIYNLQSKQLIKLFARL LLQDEDTMLEHLEQGDVAGTISVFFEKSVAVSPCTKSALTIQDVDLFLERLSRLTREEEQ IQHFRSILDKCTCNDLKMIVRLIKHDLRINAGPKHILEGVHVDAYRAFQMSRDLEAVIRR FLPSSGEKPSTSDSPLSRNKVALSLMTPVLPMLAEACTSVEMAMRKCPNGMLSEVKYDGE RVQVHKSGNDFRYFSRSLKPVLPHKVNLFKDYIAQAFPDGDDLILDSEVLMVDNETGRPL PFGTLGVHKKAEFKNANVCLFVFDCLYYNGEILINKPMLERRRILNDRMTEIPSRIMLSE IHEVHDPRDLAERIVHVLKLGLEGLVLKDIDSKYEPGKRHWLKVKKDYLCGGAMADSADL VVLGAWYGTGNKGGVLSVFLMGCYDEERDKWLTVTKVHTGHDDATLAVLQDELDMVKIGK DAEKLPSWLHAIKPMIPDFVARDPKKQPVWEITGAEFTNQGVHTAEGISIRFPRVTRIRH DKDWSTATTLKELRALFKKKPESVDFGLLLGASANTEDVSNKRAINVSPKKFGNVKRETS PPNEPSTSFKVKEEKSPSKVKKEALDVQMTKKESRSPSGRFHKKRKNDEHDESSKNVTKE ETLERKRLKTKHEIKQETETSTLARNKEEKSDTENSKQNRYIDHLDDSINAEEYLEFSTD FDSDVEDNRSSNVLQDVRASLAPDFDKSRRKDTRRMLRTLGATITENRFDSTHVIHTRAE IPTTVVLEEFADFPKTTKHVNVSWLEQTATLSRKQDEGWHAVRLVGDYCNCPCTHR NT seq 3051 nt NT seq  +upstreamnt  +downstreamnt atgtcgagcgacgtcgaggaggaacggcagcaagaagaaaaaccattcgcggtggagcgc gcgaagactggccgcgccaagtgcaaacggtgcaagtgtgcgatcgagaagggcgagata agggtcgccaagtacgtgacgagtttcttctcggatggcaaactgatgccggcgtggcat catgtcacctgcatgtttgaggtgttcgctaagcaacgggcgactacgagaaggatcgac gatccggcagaagacgtaaagggctgggaggagttgtccgatgatgacaaaaaggtcatc ctcgacaagctcgaggagctcgagaaatcctttccggctaaggttgcgaagaaacctgcg acaccacggaaagcgggcggcccttcaggtagttccctgaagaagacgacggatcagacg ccgaagaaggtcacgacgatcgataaagagaagcgtgaggagaaagatcgggaagaacga caaaaggtgccctcgaaggacgattcgtttcgcgagtttcgacgcgtatgcagcaacgtg gccgatgtcgacgcttacaccgacaagagcgcaattatcaagaggatgttcacgcaaggg tctcatggcggcggctttaagggtgacatcgtgctttggtgcaagctgttgctgcctggc gccgtgaagagaatttacaatctgcagagcaagcagctgatcaagctgttcgcgcgactg ttgctccaggacgaggacacgatgttggagcatttggagcaaggtgacgtggccgggacg atcagcgtgttcttcgaaaagagcgttgccgtctcgccctgcaccaaaagcgcgttgacg attcaagatgtcgacctttttctggaaagattatcgcgtttaaccagggaggaggaacag atccaacactttcgatccatcctcgataaatgtacctgcaacgaccttaagatgatcgtg cgtttgatcaagcacgatctgaggatcaacgctggcccgaagcacattctcgaaggtgtt cacgtggacgcgtacagagcctttcagatgtcccgggatttggaagcggtaatacgacgt tttctaccgagttcgggggaaaaaccgtccacctcagattcacccttaagtcggaataaa gtagccctctcgctgatgacacccgttctaccaatgctggcagaagcatgcacatccgtg gaaatggcgatgcggaagtgccccaatggaatgttatcagaggtcaagtacgacggcgag cgcgtgcaagtgcacaaaagcggaaatgactttcgatacttcagtagatccctgaagcca gttttgccgcacaaggtgaacctcttcaaagattacatagcgcaggcgtttcccgatggt gacgatttaatcctcgattccgaagtcctcatggtcgataacgagaccgggcgacctttg ccatttggcactttaggggtccacaagaaagccgaattcaagaatgctaatgtgtgtctt ttcgtcttcgattgcttgtattataatggcgagatacttataaacaagcccatgttggaa cgcagaagaatcctgaatgacaggatgaccgaaataccaagcagaataatgctgtcggag attcacgaagtgcatgacccgcgagatttggcggagagaatcgttcacgtactgaagctc ggcctggaaggtttggttctgaaggatattgatagcaaatacgagcccggcaagagacac tggttgaaggtaaagaaggattacttgtgtggaggcgcgatggctgatagcgcagatctc gtcgtgcttggtgcatggtacggcacaggcaacaaaggcggtgtgctgtcagtcttctta atgggctgttacgacgaagaacgcgataagtggctaactgttaccaaagtgcatacagga catgatgatgccactctggcggtactccaagacgaactggacatggtgaagatcggcaaa gatgcagagaaactgccgagctggttgcatgcgataaagcctatgataccggacttcgtg gcgagagatcctaagaaacagccggtatgggagataacgggcgccgagttcacgaatcag ggagtgcacactgccgaaggtatcagcatacgatttccacgcgtgacgcgaatccgtcac gataaagattggtccacagccaccacgctgaaagaattgcgcgcgctcttcaagaagaag cccgagtctgtcgacttcggtctcctgctgggagcgtcggcgaacactgaggatgtgtcg aacaagagagcgattaatgtctccccaaaaaaattcgggaacgtgaagagagaaacgagt cctccgaatgagccgtcgacgagtttcaaggtcaaagaagaaaaaagtccgtcaaaggta aaaaaggaagcactggatgttcagatgactaaaaaggaatcacggagtccttcgggaaga tttcataaaaaacgaaagaacgatgaacatgacgagagttcaaagaacgtcacaaaagaa gagacattggagaggaagaggttgaaaacgaaacacgagattaagcaggaaacagagact tctacattggcaagaaacaaagaagaaaaatcggatacggagaatagcaaacagaatcgt tatatcgatcatctcgacgatagtataaacgccgaagaatacttggaattctcgacggat tttgattcagatgttgaagataacaggtccagtaatgtcctgcaggatgtccgagcaagc ctcgcgcccgactttgacaaaagtaggaggaaggatacacggagaatgctgaggactctt ggcgccacgataacggagaatagattcgactcgacccatgtcatccacactcgcgcggaa attccgactacagtcgtcctagaggaattcgcggacttccccaagaccaccaaacatgtg aatgtgtcctggctggagcagactgccacgctgtcccggaagcaggacgagggttggcac gcggtacgactcgtcggcgattattgtaattgtccctgcacgcatcgataa

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