Ooceraea biroi (clonal raider ant): 105280193
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Entry
105280193 CDS
T05778
Name
(RefSeq) E3 ubiquitin-protein ligase RNF13
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
obo
Ooceraea biroi (clonal raider ant)
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
obo04121
]
105280193
Enzymes [BR:
obo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105280193
Ubiquitin system [BR:
obo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105280193
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf_RING_Vps8
zf-RING_16
MpPF26
Prok-RING_4
Hemotin
DUF2301
zf_RING_Vps8_fungal
zf-C3H2C3
zf-RING_Vps41
EphA2_TM
FeoB_associated
Cadherin_C_2
PHD
RINGv
PHDvar_NSD
zf-RING_4
LapA_dom
Motif
Other DBs
NCBI-GeneID:
105280193
NCBI-ProteinID:
XP_011338809
LinkDB
All DBs
Position
6:6419922..6426019
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AA seq
453 aa
AA seq
DB search
MQQFYLNHRVLLWLIFLIAYAAHSGADILVFSAMARHQIEEEFRDIPAKFGGIIPPEGIK
GMVVYADPPAACHKIKPPPNDTNYNSNWIVLIRRYNCSFEIKVRMAQEAGYDAAIIHNVN
SNELEPMSAKDPIGILIPSVFVSDITGVVIKENYLYDQQYFVLINDDLPFNINTHLLLPF
AIVVGICFLIIVIFMIVRCIKDRRRQRRHRLPNSSLKKIPTHKYTKGDPYETCAICLDDY
VEGEKLRVLPCAHAYHTKCIDPWLTKNRRICPVCKRKVFTADEQVVTDESDSDADDTTPL
IRDGHQGTQGGTFARQRENPFNRARRSQIRQDISNSSDNSSDSEQSFVTTDDVVSNNTGE
SSNVVPVFMVSDTHSINGEQQELERSVSSTKPHTVSLYANAQELSPSVVEIAPTRHLRVA
AVPAISSSDRHVEVLDNMSVDASASSDRNDIVT
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgcaacagttttatttaaatcaccgagtcctattatggcttatcttcttgattgcgtat
gctgcccatagcggtgcagatattctagtattttctgcaatggcgagacatcaaattgaa
gaagaatttcgtgacatacctgctaaatttggaggcataataccacccgaaggaattaag
ggtatggtagtttatgccgatcctccagctgcgtgtcacaaaataaaacctccaccaaat
gataccaattacaacagtaattggatagttttaatacgacgttacaactgtagcttcgaa
ataaaagttcgaatggcacaggaagctggatacgatgctgctatcatacataatgtaaac
agtaatgaattagaaccaatgtcagcaaaagatccaataggaattttgataccatctgtc
tttgttagtgatattacgggagtagttataaaagaaaattatttatatgatcagcagtat
tttgtattaattaacgatgatctgccattcaatattaatacacatttactcttgcccttc
gctatcgttgttgggatatgttttctaattatagtcatttttatgattgttagatgtata
aaagacagaaggcgacagcgacgacacagattaccaaattccagtttaaagaagataccc
acgcacaagtacacgaagggtgacccatacgagacatgtgccatttgtttagacgattac
gtggaaggagaaaaattacgggttttgccatgtgcacatgcttatcatacaaaatgtatt
gacccgtggttgacaaaaaatcgaaggatttgtcccgtgtgtaaaaggaaggtttttacg
gctgacgagcaagttgtgactgatgaaagcgattcagatgctgatgatacaacacctctc
attcgcgatggtcatcaaggtacacaaggtggaacattcgcgcgacaacgagagaaccct
ttcaatagagctagaagatcacaaatcagacaggatattagtaattctagtgataatagc
tctgactctgaacagtcttttgtcaccactgacgatgttgttagtaataacactggcgaa
tcatcgaacgttgtacctgttttcatggtatcggacacccatagtataaacggtgaacaa
caggaattggaacgatcggtcagcagcaccaagccacatacggtaagtttatatgcaaac
gctcaagaactctcaccatccgttgttgaaattgcaccaacgagacatctaagggtcgct
gcagttcccgcaatatcaagttctgatcgtcatgtcgaagttttggataacatgtcggta
gatgcatcggccagttccgacagaaacgatattgttacgtaa
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