Ooceraea biroi (clonal raider ant): 105280257 Help Entry 105280257         CDS       T05778                                  Name (RefSeq) DNA ligase 1 isoform X1   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism obo  Ooceraea biroi (clonal raider ant) Pathway obo03030   DNA replication obo03410   Base excision repair obo03420   Nucleotide excision repair obo03430   Mismatch repair Brite KEGG Orthology (KO) [BR:obo00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     105280257    03410 Base excision repair     105280257    03420 Nucleotide excision repair     105280257    03430 Mismatch repair     105280257  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:obo03032]     105280257    03400 DNA repair and recombination proteins [BR:obo03400]     105280257 Enzymes [BR:obo01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      105280257     6.5.1.6  DNA ligase (ATP or NAD+)      105280257     6.5.1.7  DNA ligase (ATP, ADP or GTP)      105280257 DNA replication proteins [BR:obo03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     105280257  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      105280257 DNA repair and recombination proteins [BR:obo03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      105280257    NER (nucleotide excision repair)     Other NER factors      105280257    MMR (mismatch excision repair)     Other MMR factors      105280257 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C mRNA_cap_enzyme Motif Other DBs NCBI-GeneID:  105280257 NCBI-ProteinID:  XP_011338912 LinkDB All DBs Position 1:complement(1651252..1656305) Genome browser AA seq 974 aa AA seqDB search MYIVLNDVADVLCLCSSFFTKLPSKKENSTESKSESSLALPARRLEYAAVTRSRFLVIFN GIHTTNSNNSSNKQEAHHDAQGNGKRKRDSSSELASSPLSKKLDTKSTKAKRISKTPSPA AKPRVKLGATPKSKSNKLSPGASKKTEKKKEKTSVTVNKKREEKKEKDEANEAKSVKDNE KEEKNSTDSKVNLERKSVSKTVKKKRARIIEPVESSDDEDHLPLPESPERKNSPKKPEPN GKEIKIVEESSKVDKNTLDNEANKSASDNEEKSKSPKKESMPEKKPPKKVHSFLLSKQKS DTKDDKRNGGKTRKSADQSYNPSASGYHPINDACWKRGDKTPYSAFTRTLELIEETSARL KIIEILSNYFRSVIVLSPADLLPSVYLCLNQLAPAYEGIELGVADTNLMKAIAQCTGRTL AQIKADVQEVGDLGIVAEGSRSNQRTMFQPAPLTVPNVYTKLKEIAQMTGHASLAKKLDK IQTLFVACRNTEARYLIRSLAGKLRIGLAEQSVLQALALACAMTPPEQEYPSEILNASKT MSSDRFKEKYDQIAITLKTTYCECPNYNLIIPVLLEAGINALPTKCKLTPGIPLKPMLAH PTKGVQEVLTRFDGLKFTCEWKYDGERAQIHVADNGQVSIYSRNQENNTSKYPDIIKRFK NTCGDLVKNCVLDCEAVAWDNGKKQILPFQILSTRKRKDANEEDIKVQVCVFMFDLLYLN GESLVKQPFAKRRELLREHFKEVEGEWKLANSMDTTTMEEVQIFLDESVKGNCEGLMVKT LEEEATYEIAKRSRNWLKLKKDYLDGVGDTLDVVVIGGYIGKGKRTGTYGGFLLACYDQE NEEYQSICKIGTGFKEEDLENHTKFFKDHVISQAKSYYRFDSSHEPDHWFESIQVWEIKC ADLSLSPVHRAAIGVVDPEKGISLRFPRFIRIREDKNCEEATSAQQVADMYNNQEQIKNQ KNQSASKTAEEDFY NT seq 2925 nt NT seq  +upstreamnt  +downstreamnt atgtacatcgttttgaatgacgtcgccgatgtactttgtctttgcagctcctttttcacc aagttaccgtccaagaaggaaaattcgaccgaaagtaaatcggagagttcactggctcta ccggcccgacgtctggagtacgcggctgtgactcgtagtcgatttcttgtcatttttaat gggatacatacaaccaacagcaacaactcatccaacaaacaggaggcccaccatgatgct cagggaaacggcaaacgaaagagagacagcagcagtgagctcgctagttctcctctctcg aaaaagctagatactaagtctacaaaggccaagagaatttccaaaactccttctccagct gcaaagcctcgtgtaaagttaggagctacgccaaaaagtaagtcaaataaactttcacct ggagcatcgaaaaagacagagaagaagaaagagaaaactagtgtaactgtaaacaaaaaa agagaagagaaaaaagaaaaagatgaagcaaatgaagctaagtctgtaaaagataacgaa aaggaagagaaaaattcgactgattcaaaagtcaatttggaaagaaaatctgtaagtaaa actgtaaagaagaaacgagccagaataattgagccagtagagtcgagcgacgatgaggat cacttacctttgcctgaaagtcctgaaagaaaaaatagtccaaaaaagccagagcctaat ggcaaagaaataaaaatcgtagaagagtctagcaaagtcgacaagaacactttggataat gaagcaaacaaaagtgcttcggataatgaggaaaaaagcaaaagtccaaagaaggaatct atgcctgaaaagaagccgcccaagaaagtgcatagctttttactatcgaagcaaaagagc gatacaaaggatgacaaaaggaacggcggaaaaactagaaaaagtgctgaccaatcttac aatcccagtgcatctggttatcatccaataaacgacgcgtgttggaaacgaggagataaa actccatatagcgcattcacgcgtactttggagctcattgaggaaactagtgcgagactg aagataatagagatactgtcgaattacttccgatctgtcatagttctgagcccagcggat ctgttgccgagcgtgtatttgtgccttaatcaactagctccagcgtatgaaggaattgag ctcggtgtggccgacacaaatttgatgaaggcgatagcacaatgtaccggcagaacgttg gcacaaatcaaagctgacgtccaggaggtcggtgatttgggaatcgtggcagaaggtagc agatccaatcagagaaccatgttccaaccagcaccactgaccgttcctaatgtgtacaca aaattgaaggagatcgcacaaatgacggggcatgcgtctctcgcgaagaagttggataaa attcagacgctgtttgtagcgtgtcgtaatactgaagcgaggtatctcatcagatcgttg gccggaaaacttcgcatcggattggcagagcaatccgtcttgcaagcactggctctagct tgtgcgatgacgccaccggaacaagaatatccatcagaaattctaaatgcaagcaaaacg atgtcaagtgatcgtttcaaagaaaaatacgatcagatagctattacattaaagacaacg tattgcgagtgtccgaattacaaccttataattcccgtcttactagaggctggcattaat gccttgccgaccaaatgcaaacttactcctggaatacctttgaaacccatgttggcgcat cctactaagggtgttcaagaagtcctcacacggttcgatggcttgaagttcacgtgtgag tggaaatacgacggggaaagagcacagatacacgttgcggacaatggtcaagtcagcatc tacagtagaaatcaagagaacaataccagcaagtatccggatattattaaacgattcaag aatacttgtggtgacttggtgaaaaactgtgtactcgattgcgaggcggtcgcctgggac aacggaaagaagcaaattctaccgttccaaattctcagtacgagaaagcgaaaggatgcc aacgaagaggacatcaaagtgcaagtgtgcgtgttcatgttcgatctgttgtatctgaac ggcgagtcgttggtgaagcagccgttcgcaaaacgccgcgagttattgcgagagcatttc aaggaggtagaaggcgaatggaaattggctaatagcatggacactacaacaatggaggag gtgcaaatattcttggacgagtccgtgaagggaaattgcgagggtttgatggtgaagaca ttggaggaagaagcaacttacgagatcgcgaagcgatcgcgcaattggctgaagctaaag aaggattacttggacggtgtcggcgatacgctcgatgtcgttgtaattggtggttatatc ggcaagggaaagagaactggcacctacggtggcttcctcttggcgtgttacgatcaggag aacgaggagtatcaaagtatttgtaagatcggtacgggtttcaaagaggaagacctcgaa aatcacacaaagttcttcaaagatcacgtgatatcccaagcaaaatcatactatcgcttc gacagtagccatgagccagatcattggttcgagtcgattcaagtctgggagatcaagtgc gccgatctctccctctcgcctgttcatagggcggctattggagtagtcgatccggaaaag ggaatatctttgagatttccacgatttattagaatccgcgaggacaagaattgcgaggag gcaacgtccgctcaacaagtcgcggacatgtataataatcaagaacagataaaaaatcag aaaaatcagtcagcatcgaagaccgcggaggaagatttctattaa

DBGET integrated database retrieval system