KEGG   Ooceraea biroi (clonal raider ant): 105280287
Entry
105280287         CDS       T05778                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1 isoform X1
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
obo  Ooceraea biroi (clonal raider ant)
Pathway
obo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:obo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105280287
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:obo03019]
    105280287
Messenger RNA biogenesis [BR:obo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     105280287
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     105280287
SSDB
Motif
Pfam: LSM IFRD_C
Other DBs
NCBI-GeneID: 105280287
NCBI-ProteinID: XP_011339008
LinkDB
Position
1:complement(1919007..1920581)
AA seq 141 aa
MSEMTELPPGTASLLEELNKKLMVLLRDGRTLIGVLRSVDQFANIVLQDTIERIHVNKEY
GDIPRGIFIVRGENVVLLGEIDLEKEKNSVLKQVSVDVILDAQRHEQELKQDEKRHMNKI
SFKQRGFSASCMPDLSHDDMY
NT seq 426 nt   +upstreamnt  +downstreamnt
atgagtgaaatgactgaattgccaccaggaacagcatcgctgctcgaggaactcaacaaa
aagctaatggttctattgagggatggcagaacgctgattggagttttaagaagtgtcgat
cagtttgctaatattgtacttcaagataccattgaacgaattcacgttaataaagaatac
ggtgatataccaagaggtatttttatagtgagaggagaaaacgttgtgcttttaggagaa
atagatttagaaaaggaaaagaattcagtgttaaagcaggtatcggtggacgtcattttg
gacgctcaaaggcacgaacaagaattaaagcaggatgagaaacgtcacatgaacaaaatt
agttttaaacagcgaggtttctccgcgagttgtatgccggatttaagtcacgatgacatg
tattga

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