Ooceraea biroi (clonal raider ant): 105280310
Help
Entry
105280310 CDS
T05778
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105280310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
obo03041
]
105280310
Spliceosome [BR:
obo03041
]
Complex B
Other components
Prp19-related factors
105280310
Complex C
105280310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
RRM_occluded
Torus
RRM_YTH1
zf-CCCH_2
zf-CCCH
zf-CCCH_4
Nup35_RRM_2
zf-CCCH_10
RRM_3
zf-CCCH_12
DUF5092
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
105280310
NCBI-ProteinID:
XP_011339055
LinkDB
All DBs
Position
1:2199151..2201066
Genome browser
AA seq
413 aa
AA seq
DB search
MATSKTTNTYNRQNWEDAEFPILCQTCLGDNPYIRMTKEKYGKECKICMRPFTVFRWCPG
ARMRFKKTEVCQTCSRLKNVCQTCLLDLEYGLPIQVRDAALKIKDDLPRSDVNKEYYVQN
IDNEIGKIDPTTPAGAVGKSAAASDLLMKLARTSPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGVNDPVADKLMRRAAAMPKLDPPEDKSITTLYIGNLG
DVLTEKQLRDHFYQYGEIRSVTMVPRQQCAFIQYTQRSAAEAAAERTFNKLILGGRRLTI
KWGRSQGRQTISAAEATREILEPVPGLPGALPPPPESMGNNFFNLQTSPGMMPPMMIPPP
PVAPQFMFPPQIATTATAAAPIFPPGTTPIHYPSQDPSRMGASQGIGKPWPEE
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggccacgtcaaaaactactaatacgtataacagacaaaattgggaggacgcggagttc
ccgatactatgccaaacgtgcttaggcgacaatccatacattcgcatgacaaaggaaaaa
tatgggaaagagtgcaagatctgcatgcggccgttcacggtatttagatggtgtccagga
gcaagaatgcgatttaagaagaccgaagtttgccagacgtgcagtcgtctgaagaacgtc
tgtcagacgtgtctgttagatctggaatacgggctgcccattcaggttcgtgatgctgcc
ctaaagatcaaggacgacctgccacgttcggatgtgaacaaggagtactacgtgcaaaac
atagacaatgagatcggcaagattgatccgacaacaccagctggtgctgttggcaagtcc
gctgcagccagtgatctgctcatgaaactggcgaggacgagcccttactataaaaggaac
agaccacacatatgttcattttgggtaaagggcgagtgcaagagaggcgaggagtgcccg
tatcggcacgagaaaccgacagatcccgacgatccgctggccgatcagaacataaaggat
cgttattatggcgtgaacgatccagtggcagataaattgatgcgacgggcagcagccatg
ccgaaactcgatccacccgaggacaaatccattacaacattgtacattggtaatctgggc
gacgtgttgacggagaaacagctgcgtgaccatttctaccagtacggcgagattcgttcg
gtcaccatggtaccgcgtcagcagtgtgcctttattcagtatacacaaaggagcgccgct
gaagcagcagcggagagaaccttcaacaagttgatactaggtggaagacggctcactata
aagtggggtcgttctcagggcaggcagaccatatctgcggcagaagcgacgagagagatc
ctcgagcccgtcccaggactgcctggagcgttaccaccgccgccggagagtatgggcaac
aatttcttcaatcttcagacttcccctggcatgatgccaccaatgatgataccgccaccg
cctgtcgcacctcagtttatgttcccgccacaaatagcgactaccgccacagctgcggca
ccgattttcccaccaggaacgactcccatacactatccgagccaagatccgtccaggatg
ggcgcgtcccagggcatcggcaagccttggccagaagagtaa
DBGET
integrated database retrieval system