Ooceraea biroi (clonal raider ant): 105280317
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Entry
105280317 CDS
T05778
Name
(RefSeq) GATOR complex protein DEPDC5 isoform X1
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
105280317
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
obo04131
]
105280317
Membrane trafficking [BR:
obo04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
105280317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IML1
DEPDC5_CTD
IML1_N
IML1_N_fung
DEP
Motif
Other DBs
NCBI-GeneID:
105280317
NCBI-ProteinID:
XP_026826068
LinkDB
All DBs
Position
1:complement(2260192..2273835)
Genome browser
AA seq
1559 aa
AA seq
DB search
MKLFKLIVHQKNFSGEDLIINPKDYPGIKTGDVVEIYHPEDEFSRLLLQVTSFKEDLQGR
ETISVENNVATMFQLRTFADVYMNIVNPDDVALDSIELTFKDQYMGRSEMWRLKNSLVRT
CVYINKKIEFCSGSIRCQVHEMWSQGDRVACGVITDDTKVVFRSSTSMVYLFIQMSSEMW
DFDIHGDLYFEKAVNGFLADLFQKWRKNGSNHEVTIVLFSRTFYNATSLEEFPNHMRECL
QQDYRGRFYEDFYRVAIQNERYEDWSNVLVQLRKLFTDYQKIVLEYHQKPGISIPKAINS
TAAQGNFLEVLNMSLNVFEKHYLDRSFDRTGQLSVVITPGVGVFEVDRELTNVTKQRIID
NGVGSDLVCVGEQPLHAVPLLKFHNKDSSVNAPDDYSMPHWINLSFYSTNKKIPYSTFIP
RIKLPQRVSKPMVDNGKLHCKTRLLQEDPRECLHNTLFDYDAYDAQVFQLPAAHTSSVQR
INTRTKKTSVACLETHNNGHLLKLLKRKMSDPDIHHPPPEAHSPPVALRSAAITIPHKTD
DDTSDSNGDRTGASKTPVKNDLTDSEISPPFRPIIGSAGSPTNSISQPTNILRPSRALIN
PFDPSHVTIKLTSNRRRWTHIFPKGPTGVLIQQHHYQAVPAQPTCPEAQCEAVPSTVSGS
PMEAAANSSQISRSASQIGFQDTKGKLPRSSALATNGDKSANSPSAVTNKSLTLLWGATG
EQEWTPALTTAIIGVDWKSLTIPACLPITTDYFPDKRSLQNDYVVSDYNLLPDDVNADFA
QQRAIYKKPLTTVEVFKELVSQRLAQGFQLIILPSNNKNQNSTAGSNAVPAISTVIRGRQ
TESEPKEEYLLSIGRIFHKISLFDNSITVTRYRPRHPYPPFNIHYRYRFHAPHHDTYEVS
WVSFTTEKLENYNWNYLDHYICTRGHTDFYLVEALKYWRFRVFLLPLHNSATRKILEGSP
RCDVYTSASNVEQASLMDGFLRFIEGWLNKIRRPNPNKNWSPTALGGVPPRDPASHLTRR
RHSTSLIFLTNQTSLVGSSPFRERLGSNRLPEKPRPRSGSKVMDRGRVSPASEAVLPLSI
EQQQQDHFDVNDDSTSMELTKIKSNATNAEILEAMKHPQTGVGFLTQHPSLPSQTFVSAD
AIQWLNNHIEGGVGVEQGINIMKGMIQDKLICHASGDFSQPFILGFYLYHIVQDKENQKA
ADYSAPLGDLQSFENEWVEVEMRPPKGWCESTFPTTLSTTVSSPIAIPNYDIIDESNVPP
FLKDEIDVTESIDERNGSVPLYKHTHLDIDINNKSDRIEWGHLRYQSIYKVDHSYELVVQ
WVASSGSIVADLIFVWQRKAQMCGIQMVPIPSDLLALPYTLKSDPLRGPIFIPLDTECLM
ANKRYLFEEFREDTYAQRLFLFQEAILQRFGFVPCLVENVEHDRQYVHVTGNAFILVPST
ANTRPRPRTGTNVVRRNTGQKRYPVHPDQPSPHEAYITRHVGGKNKDDHSVDRKMGFLWS
WNHMVSRKWKSLSTSTGDELFQKKIIQDFRHFCSNGDNRLKQFWESCWELKEKTCTKTK
NT seq
4680 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcttcaagctgatagtgcatcagaagaatttcagcggggaggatttgataatc
aatccgaaggattatcccggcataaagacgggcgatgtcgtcgagatctaccatcccgaa
gatgagttcagtcgtctgctgttgcaagtcacctccttcaaggaggaccttcagggacgc
gagactatcagcgtggagaataacgtagcgacaatgttccagctgagaacgttcgctgat
gtgtacatgaacatagtgaatccggatgacgtagcgctggattccatagagttaactttc
aaggatcagtacatgggacgcagcgagatgtggcgcttaaagaacagcctggtacgcacc
tgtgtctacatcaacaaaaagatagagttctgcagtggtagcattcgatgccaggtgcac
gagatgtggtcgcaaggcgatcgcgttgcctgcggcgtgataacggacgataccaaggta
gtgttccgttcttctacgagcatggtgtacctcttcatacaaatgagctccgagatgtgg
gactttgatatccacggtgacctttacttcgagaaagcggtcaacgggttcctagcagat
ctcttccaaaagtggaggaagaatggtagcaatcacgaagtgacgatcgtgctgttctcg
agaaccttctacaacgcaaccagcctggaggaatttccgaatcacatgagggagtgtttg
cagcaggattatagaggcagattctacgaggatttttatagagtagcgatacaaaatgag
aggtacgaagactggagcaacgtcttggtgcagttacgcaagctgttcactgactatcag
aagatcgttttggagtatcaccagaaaccaggcatcagtatacccaaggcgataaactcg
accgctgcgcaaggcaattttctagaagtattaaacatgtctctaaatgtcttcgagaag
cactacttggatcgtagtttcgataggactggccagttgtccgtagtaatcacgcccgga
gtcggagttttcgaggttgacagagaactgacaaacgtcaccaagcaaagaatcattgac
aatggtgtaggcagcgatttggtatgcgtaggcgagcaaccgcttcacgcagtgccgctg
ttaaagtttcataacaaagattcctccgtaaacgcaccggatgactacagcatgcctcac
tggataaatcttagtttttattccacgaacaagaagatcccctattccacgttcatcccg
cgaataaagctaccgcagagagtatcgaagccaatggtggacaatgggaaattgcattgc
aaaacgaggctcctgcaagaggatccgagagaatgcctgcacaacacgttattcgattat
gatgcttacgacgcgcaagtgtttcagttaccggcagctcatacttcaagcgtacaaagg
ataaacacaagaacgaagaagacgagcgtggcgtgtctggagacgcataacaatggccat
ttgttgaagctcctgaaacgtaagatgtctgatcccgatatacatcatcctccaccggaa
gcgcactcaccgccggtcgcattacggagcgcggcgataacgataccccataaaacggat
gacgacacgagcgattctaatggggacagaactggtgcatccaagacaccggttaagaat
gacttgaccgactcggagatatctccgcctttcagacccatcattggtagcgccggcagc
ccgacaaattccatctctcaaccgacgaatatacttaggcctagtagagcgttaattaat
ccgttcgatccgtcgcacgttacaattaagctcaccagtaacagacgaagatggactcat
atatttccgaaaggaccaactggggtactaatacaacagcatcattatcaagctgttccg
gcgcaaccgacgtgtccggaggcacaatgtgaagctgttccgtcgaccgtgagcggatct
ccgatggaggctgcggcgaattcaagtcaaatttcaagatcagcatctcaaataggattt
caagacacgaagggaaagttaccgcggtctagtgcccttgcaactaatggagacaaaagt
gcaaattccccttcagctgtgacgaataagagtctgacccttttgtggggtgctactggc
gagcaagaatggacgcctgctttaacaacagcgatcataggggtcgattggaaatcgtta
acgattcccgcgtgtctacccatcactacagattacttcccagacaagcgaagtttgcaa
aatgattatgtcgtgtcagattacaatctgcttccggatgatgtgaacgctgattttgct
caacaacgtgcaatatacaagaaaccactcacaacagtggaagtgtttaaagagctcgtc
tcgcaacgcctggcccaaggttttcagctgattattttaccatcgaataacaagaaccaa
aacagcacagctggcagcaatgccgttcccgcgattagtacggtaatacgtggtagacaa
actgaatccgagcctaaagaggaatatctgcttagcatcggacgaatcttccataaaata
tcgttatttgataattctataacggttacaagataccgcccgcggcatccttatccacca
ttcaatattcattaccgatatcgattccatgctccgcatcacgacacttacgaagtatcg
tgggtatctttcaccacagagaaactcgagaactataactggaattacctggaccattac
atttgcacgcgaggtcatacagacttttacctagtggaagctctcaagtattggagattt
cgggtatttctgttacccctgcacaactctgcaactcgcaaaattttagaaggctcccca
agatgcgacgtgtacacttcagctagtaatgttgagcaggcatcgttgatggacggtttt
ttacgctttatcgaggggtggctgaacaaaatacgacgaccaaaccctaacaaaaattgg
agccccacagctctaggtggtgtccccccaagagatcctgcctctcatttgaccagacgc
aggcacagcacgagcctgatattcctcactaaccagaccagtctagtcggcagctctcct
ttcagggagcgactcggaagcaaccgcctaccggagaaaccgagaccaagatcgggctcg
aaagtaatggacagaggacgtgtatcgcccgccagtgaagcagttttgccactatcaatc
gagcaacaacagcaggatcattttgacgttaacgatgacagtacgagcatggaactgacc
aagataaaaagcaatgcgacgaatgcggaaattttggaggccatgaaacaccctcagact
ggcgtcggctttctgacgcaacatccctcgctcccgagccagacatttgtcagcgcggat
gcgatccaatggctgaacaatcatatagaaggtggcgtaggagttgaacaagggattaat
atcatgaagggaatgattcaggacaaattaatatgccacgcatccggcgatttctctcaa
ccgtttattctaggattttatttgtatcacattgtgcaagataaagaaaaccaaaaagcc
gcggactattccgctccgctcggtgatttgcaaagtttcgagaacgagtgggtggaggta
gagatgagaccaccgaaaggatggtgcgaatcaacgtttccgacaacactgtcaacaacg
gtgtcgtccccaatagccatacccaattacgacattatcgacgaatcgaacgtcccgccc
tttttgaaggacgagattgatgtaacagaatcgatagacgaaagaaatggatcagtacca
ttgtacaagcacactcatctcgatatcgatattaataacaaaagcgacaggatcgaatgg
ggtcacctgaggtaccaatccatttacaaagtagatcattcctacgagctcgtagtgcaa
tgggtcgcgtcgtccgggagtatagtagccgatctgatattcgtttggcaacgtaaggct
caaatgtgtgggattcaaatggtgcctattcccagcgatttgctggcgctgccatatacc
ttgaagagcgatcctctaagagggcccattttcattcctctcgatacggaatgcttgatg
gcgaataaacgatatctgtttgaagaattccgggaagacacttatgcgcaaagactgttt
ttattccaagaagcgattctgcagagattcggcttcgtgccgtgcctggttgagaatgtc
gagcatgatcgtcagtacgtacacgtcactggcaatgcatttatattagtaccgtccact
gcgaacacccgaccgcgtccacgaaccggtacgaatgtcgtacgacggaatacaggacag
aagagatatccggtccacccggatcagcctagtccgcacgaggcgtacattaccagacac
gtcggaggaaagaataaagatgatcacagcgtagacagaaaaatgggatttttgtggtct
tggaatcacatggtcagtcgtaaatggaagtcactgtccacttcaacgggcgatgaattg
tttcagaagaagatcatacaagattttcgacatttctgttccaacggtgataatagactc
aaacaattctgggaatcttgttgggaattaaaggagaagacttgtacaaagacgaagtaa
DBGET
integrated database retrieval system
