Ooceraea biroi (clonal raider ant): 105280377
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Entry
105280377 CDS
T05778
Name
(RefSeq) nuclear pore glycoprotein p62 isoform X1
KO
K14306
nuclear pore complex protein Nup62
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105280377
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obo03019
]
105280377
Messenger RNA biogenesis [BR:
obo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105280377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
GAS
Crescentin
Relaxase_C
Motif
Other DBs
NCBI-GeneID:
105280377
NCBI-ProteinID:
XP_011339191
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Position
1:complement(3248415..3250438)
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AA seq
399 aa
AA seq
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MATGTGFGLVNTVATTTATAAPSTFNLVSSTAPAVATPGLSFDASKVGSTTAATAGFALA
TTTTGGFSFGAPKSMAGPTGLTFGTPNAMVTGTGFGLGSTVATTTSAPVASSFNLTSSTA
PTAATAGLSFDASKAGATTTATTGFALAPTTTGGFSFGVGTPTTTSAGFPLSKTTSAAIS
TSLTHNTPSTHTALGTTTTVSSATGVQPGAINFCQLEESINKWTLELEEQEKVFVNQATQ
VNAWDKLLITNGEKIVTLNQEVERVKIEQQQLEHELDYVVGQQKELQECLVPLEKELASL
SVSDSDREYTYRLSENLDTQLKRMSEDLKEIIEHLNEANRAQDSSDPIVQIGKILNAHMN
SLQWLDQQTALLSQKIQQIDQMHQSFRQESEQNLHLAYN
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggccactggaactgggtttggacttgtcaatacagttgcaacgaccacggccacggca
gctccctcaacttttaatcttgttagtagcactgctccagcagttgcgacaccagggctc
tcgttcgatgcctccaaagtaggttctactacagctgcgactgcaggattcgctcttgcg
accactacaacaggtggttttagttttggagcacccaaatctatggcaggacctactggc
ctgactttcggtactccaaatgccatggtcactggaactgggtttggtcttggcagcaca
gttgcaacgacaacgtctgcgccagttgcttcaagcttcaatctcaccagcagtacagct
ccgacagccgcaacggcgggactctcgttcgatgcttcgaaagcaggtgctaccacgacc
gcaaccacagggttcgccctggcaccaactacgacgggaggatttagttttggggttgga
acgccgacaactacttcggcagggtttcccttgagcaaaacaacttcggccgctatctca
acgagtttaacacacaacacaccctctactcatactgctttaggaaccaccactactgtc
agttctgcgactggtgttcaaccaggagcgatcaatttctgtcagctcgaggaatcgatt
aacaagtggaccttggaattggaggagcaagagaaagtatttgtgaatcaagcaacacaa
gttaacgcatgggataaattgttgatcacaaacggcgagaagatagtgacgctgaatcaa
gaagtcgaaagagtgaaaattgaacagcaacaattagaacatgagctggattatgttgtt
ggccaacagaaggagttacaagagtgcttggtgccgttagagaaggagctggcgtctctt
tccgtctcggactccgatcgggagtacacttatcgcttgtcggagaatcttgatactcaa
ttgaaacgtatgtccgaagatttgaaggagataatagaacacttgaacgaggcgaatcgc
gcccaagactctagcgatcccatcgtccaaatcgggaagatcttgaacgcgcacatgaac
agtttacaatggttggatcaacagacagccctgctgagccagaagatacagcagatcgat
cagatgcatcaaagttttagacaagaaagcgaacaaaacttgcacctagcgtataattaa
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