Ooceraea biroi (clonal raider ant): 105280410
Help
Entry
105280410 CDS
T05778
Name
(RefSeq) protein polybromo-1 isoform X6
KO
K11757
protein polybromo-1
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105280410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
obo03021
]
105280410
03036 Chromosome and associated proteins [BR:
obo03036
]
105280410
Transcription machinery [BR:
obo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
105280410
Chromosome and associated proteins [BR:
obo03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
105280410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_WDHD1
HMG_box_2
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
105280410
NCBI-ProteinID:
XP_011339245
LinkDB
All DBs
Position
1:complement(3575547..3588126)
Genome browser
AA seq
1656 aa
AA seq
DB search
MDRSLEYIRMNKRRRTSSVASRGTEDDGDDIPPEPTKRRKKLDPSDLCQQLYDVLRNQKK
EDGSLLCDAFIRVPKRRQEPGYYEVVSNPIDLLKVQQKLKTDEYRDMDDLAADIQLMVNN
AKAFYMRTSPEYKDATELWELCVNTKNRIMEEYEDPEPKGKLILKVGRLARKATRQDDAE
DTSESSINLDEETMQLFEDLFAAVMTATDPIDNNRPLHIVFQLKPSKKLYPEYYDVIETP
IDLKTIARKIQEGAYSSIGDMEKDLILMCRNACQFNEPGSQIYKDAKLLKKIITAAAKRQ
DSGLGSNTPKIATTAPSTRSKRGSRTMAQSFIAQTAALPDEDEESDDEEEEPAETEEADN
PQWQLFQTIRTAPNTQGIRMSEYFWKLPSKRLYPDYYKMIKNPISLLQIRTKIKKGEYGT
VSEVAGDMNIMFENAKKYNIHTSRLYKCAVKLQKIMQEKVQELLEFDQDSDSDSESENSS
QQPRLIKRASNLLTRGKYKDNIPLKKRLYALVKCVIEYVCEDGRQPMLMFMEKPSKKLYP
DYYQVIAEPIDMLAIEANIKVEKYQSENELIQDFKLMFNNCRQYNEEGSLIYEDANTLEK
VLMDKVKELGPLPDNPKSKSTASTPTRNVGRPRKVVPLHLQKLRTLYDTIKDYHDAKGRQ
LSLIFMKLPNKNEYPDYYEVIKQPIHMEKIAATLKNNGYDNLDELVSDFILMFDNACKYN
EPDSQIYKDALILQRLVLQSKLQLSEDDESVPDVSAAVQEILATIFTALYNHQDEEGRCY
SDSMAELPEHDIVDGKKVRGLSLDLIKRRLDRGVYKRLDRFQEDVFTCLERARRLSRTDS
QPFEDSVELQAFFLRTRDEVTRAGDLLHSPALNYTLLDLSAQVAELKRIKQQQELNLPNE
DESCDGNETKDPETNTNTDTNNSDNGGSMSFNQEVYRAGDFAYIEPIERGMEYSVVLIER
LWTNAESQQMLYGNLFYRPSETYHVASRKFLDKELFKSDAHVAVPLAKVAGRCCVLSVKD
YFRMQPEGFLEKDVYVCESRYSTKARAFKKIKVWNFDPDHLKLLPREKPLEPKRVISVYK
ERLEKHKEEIAELEEGEKLMEKERPNVILYNPEDTENTYYEQYNTCVGSVKTGDFVYVAT
DGGRQQIAQIDAIWSTKDGKCYFKGPWLLMPTEVPHTPTKLFYKQELFLSTVDGTHPIVA
IVGKSAVLDYGEYICSRPTEIPEDDIYICESLYDETKNLMKKLGQEGLKKFNHSSAVTED
EIYFFRRPINPAKVSSDVAQTQNQVKSVTPSSAQFEMEASPLLPKLEPDVLSMGVGLGVG
VGVGVGEDSMDAGGPPSVGSTEAQPVLSNTQTPVSTKKKTTGKKLVTGYILYSSKMRTQI
TQNNPESSFGEISRIVGNEWRKLPAGEKQAWEERAIKMNEDGGQLKTTSVNTNSMQDVVY
ECCWDNCDWQFEDMTDCIDHCIAEQNGHVQSSFVNAPSDVEYQCQWRGCGRTKKSVPPFP
SVQRLARHVKEVHILKSHGRIIPPSERSRNYMPSKGPTVLPPMETETSAAATQTSNLPAA
KQPEPLFVAVPPRPSRVLHSDAYLRYIEGLNVENRYISNWDKQMNANPDNTQIPDVTKLP
AEWLGNGVGNHGNVVNALWTLRNMMMRDVLAINKTL
NT seq
4971 nt
NT seq
+upstream
nt +downstream
nt
atggatcggagtttagaatacatcaggatgaacaaacgccgtagaacgtcctcagtggcg
agtcgcggtacagaggatgatggtgacgatataccacctgaaccaacgaagagaaggaaa
aaactagatcctagtgacttgtgccaacaattgtatgatgtactccgcaatcagaagaag
gaggacggatccttgttgtgcgatgcatttatacgtgtgcctaaacgcaggcaagaaccg
gggtactacgaagttgtttccaatcccatcgatctcttgaaagtgcaacagaagctaaag
acggatgagtaccgcgacatggatgaccttgctgcagatatacaacttatggtcaataat
gcgaaagctttctatatgcgtacctcacccgagtataaagatgcgactgagctgtgggaa
ctgtgtgtaaatactaaaaatcgtattatggaagagtacgaagatccggaacctaaagga
aaactcattctaaaagttgggcgattggctcgtaaagcaacaagacaagatgacgctgaa
gatacttctgaaagttctataaacctcgacgaagagactatgcagctttttgaggactta
tttgcagcggttatgacagcgactgatcccatcgacaataacaggcctcttcacattgtg
tttcagctcaaaccatccaaaaagctttatcccgagtattacgacgtgatcgagacaccg
attgacttgaaaactatcgcgagaaagattcaggagggcgcatacagctcgatcggtgac
atggagaaagatctaatactcatgtgtcgcaatgcttgtcagttcaacgagcccggctcg
caaatctataaagacgctaaacttctgaagaagatcatcactgcagctgcgaaacggcag
gatagcggattgggtagtaacacacctaagatcgccacgaccgcgccgtcgacgaggagc
aaaagaggcagtcgcaccatggcgcaatcgttcatagcgcaaactgcggcattacctgac
gaggatgaggaaagcgatgacgaggaggaagagcctgctgagactgaggaagctgataat
ccacaatggcaactatttcaaactattcggacagctcctaatactcaaggtataaggatg
agtgaatatttttggaaactcccatcgaagagattgtatcctgattactataagatgatt
aagaatcctatatctctattacaaatacgtacaaagataaaaaagggtgaatacggtacc
gttagcgaagtagcaggagatatgaatatcatgtttgaaaatgctaaaaagtataacata
catacttctcgactgtataagtgtgctgttaaattacaaaaaataatgcaagagaaagta
caagaactcctagaatttgatcaggattccgattcggacagcgaatcggagaatagctcg
cagcaacctagactgatcaaacgtgcttcgaatttattgacgcgaggaaaatacaaagat
aacataccgttaaagaagagattatacgcattggtcaagtgtgtcatagaatacgtttgc
gaggacggccggcagcccatgttaatgtttatggagaaaccttccaaaaaattgtatccc
gattactatcaagtcatagcggagccgatagatatgctagcaattgaagccaatatcaaa
gtggaaaaatatcaaagtgaaaatgagctaatacaagattttaagttaatgtttaacaat
tgccgtcaatataatgaggaaggctcgttgatatatgaagatgctaatacattggagaaa
gttttgatggataaggtgaaagaattgggaccgctgccagataatcccaagtccaaatcg
actgcgtcgactccaactaggaacgtcgggagaccgagaaaagtagtaccgcttcactta
caaaaattacgaaccttatatgacactataaaagattatcacgatgcaaaagggagacag
ttgtctctaattttcatgaaattgccaaataaaaatgagtatccagattattacgaagtg
atcaagcagcctatacatatggagaagatagctgccaccttgaagaacaatggatatgac
aatttagacgagctggtatccgatttcatattaatgttcgacaacgcgtgcaaatataat
gagccggattcacaaatatacaaggatgctttaatacttcaaagactagtattgcaaagt
aagctacaactgagtgaggatgacgaaagtgttcccgatgtatcggctgccgttcaggag
atattggcaacaatatttactgcgctctataatcatcaagatgaagaaggaaggtgttac
tccgactctatggcagagcttccggaacacgatattgttgatggaaaaaaagtgcgagga
ttgtcattggatctgattaaaagaagattggatcggggagtttacaaaaggttagatcgt
tttcaagaggatgtgtttacgtgcctggagagagcacggagattatcgcgcaccgactcg
caaccgtttgaggatagcgtcgaattacaagcattttttttacgtactcgcgacgaggta
acgcgtgcaggggacctgttgcattcgcctgcgctgaattacaccctcctcgatctgtct
gcccaggttgcggagcttaagagaataaaacaacaacaggagttaaatctacctaatgaa
gatgaaagttgcgatggaaacgagacaaaagatcctgaaacaaatacaaatacggataca
aataatagcgataacggaggatccatgagtttcaatcaagaagtgtatagagccggtgac
tttgcatacattgagcccatcgagaggggcatggaatacagtgtcgttctcatagaaagg
ctctggactaacgcggaatctcagcagatgttgtacgggaatttattttacagaccgagc
gagacttatcacgtggcatcgcgaaaatttttagacaaggaattatttaagagcgacgcc
cacgtggcggtacctctggcgaaggtagcaggcagatgttgcgtcttaagtgtaaaagat
tacttccgaatgcagcccgaaggattcttggagaaagacgtctacgtgtgcgagtcgcgc
tactccacgaaagccagggcctttaagaaaatcaaggtctggaatttcgatccggatcac
ttgaaattacttccgagagagaaaccgttagaaccaaaacgagtaatctctgtgtataaa
gaacgcttggagaagcacaaagaagagatcgctgagctagaggagggagaaaaactcatg
gaaaaggaaaggcctaatgtgatactatataatccagaggataccgagaatacatattac
gagcagtacaacacgtgtgtgggatctgtgaaaacaggtgatttcgtttacgtagcgaca
gacgggggcaggcagcagatagcacaaatcgacgctatatggtcgaccaaagacgggaaa
tgttatttcaaaggcccatggttattgatgcctacagaagtgccacatacacctacgaaa
ttattttataagcaagaattgttcttatccactgtggacggtactcatcccattgtagct
attgttggaaagagtgccgttcttgattacggagagtacatatgtagtagacctacggaa
atccctgaggacgatatttacatttgtgaatcattgtacgacgagactaagaatttgatg
aagaaacttggccaggaaggtttaaaaaagtttaaccattcctcagcagttaccgaggat
gagatctattttttccgaaggcctattaatccagccaaggtttcgagcgatgtggctcag
acgcaaaatcaagtcaagtccgtcacgcccagctcagctcaatttgaaatggaagcgtca
ccattattaccgaagctggaacccgatgtactaagcatgggggtaggattaggagtggga
gtaggagtaggagttggggaagacagcatggatgctggtggtccaccatccgttggatct
acggaagctcaaccggtgctctccaatactcaaacacctgtgtcgactaagaagaaaacg
acgggtaagaaattagttacgggctatattttgtattcgagtaaaatgcgaacgcagatt
acacaaaacaatcctgaatcgtccttcggagagattagcagaattgttggcaacgagtgg
cggaagctgccggcaggagagaagcaagcctgggaagaacgggccatcaagatgaacgag
gatggtggccagctaaagaccacttcggtgaacacgaattccatgcaagatgtggtgtac
gagtgctgttgggacaattgcgactggcaattcgaagacatgaccgattgcatcgatcat
tgcatcgcggaacaaaatggtcacgtgcaatcatcctttgtaaatgctcctagcgatgtt
gagtatcagtgtcaatggcgcggttgtggtcgaacgaagaagtccgttccaccgtttccg
agtgtacagagactcgcgagacacgttaaagaggtgcacattcttaaatcccacggacgt
ataataccaccttccgaaagaagcagaaactacatgccttcaaaagggcccacggtatta
ccaccaatggaaacagaaacttcagctgccgcaactcaaaccagcaacttgcctgctgct
aagcaaccggaaccactgttcgttgcagtgccgccgagacccagtcgcgtattacattcg
gatgcttatttgaggtacatcgaaggattaaacgtagagaaccgttacatatcaaattgg
gataagcaaatgaacgccaatccggataatacacaaatccccgatgtgacaaagctgcct
gccgaatggctgggcaacggtgttggtaatcatggaaatgtggtgaatgccttgtggaca
ctcagaaacatgatgatgcgggatgtgttagccatcaataaaactttatag
DBGET
integrated database retrieval system