Ooceraea biroi (clonal raider ant): 105280434
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Entry
105280434 CDS
T05778
Name
(RefSeq) elongation factor-like GTPase 1 isoform X1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105280434
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
obo03009
]
105280434
Ribosome biogenesis [BR:
obo03009
]
Eukaryotic type
Pre-60S particles
GTPases
105280434
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
GTP_EFTU_D2
EFG_III
EF-G_D2
EFG_IV
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
105280434
NCBI-ProteinID:
XP_011339301
LinkDB
All DBs
Position
1:3668351..3700229
Genome browser
AA seq
1076 aa
AA seq
DB search
MCTNTLTVSRCRDYDFAHSLNLTMRRITVERFNDIQADTKRIRNICILAHVDHGKTTLAD
SLVASNGIISHKLAGKLRYLDSRPDEQIRGITMKSSSITLYHMYNETDHVINLIDSPGHV
DFSSEVSTAVRLCDGALIIVDVVEGVCPQTRSALSIAYIEGLKPILVLNKIDRLITEMKL
TSLDAYIRLTQVLEQVNAITGELFASDIMEREDREKTVTSRSDKVNERDLADWQSMLEEV
DDSNLYFSPEQGNVLFTSAIDGWGFSIKEFAKIYSNKLGFSERVLCKTLWGDFYLNNKTK
RIMKGAQEKAKKPLFVQLILDNIWLLYETVVIRKDKNKLLAMTEKLNVKLSTRDMRHTDP
RVQLQAVYSQWLPLAQICLDMVCEEIPAPHNLTSEKIERLLSGNGDFSALPPETQQLKTT
FLSCDPRQASVIVFVSKMFPVDRDMLPENRLKLLTAEELSEKREIVRQRHRERLMQKPVE
NQEGGTCNTSYNNDEDAKHEEEEVTDKSDSILVAFARIYSGTIKIGDELYVLGPKHDPGV
ALERERAGERIDPSLVLKDLKPGRHVTKVTIGKLYTLMGRELVAVNEIPAGNVFGIGGLE
EHVLKTATLSTTIACPSFTELTSLAVPILRVALEPTHPNDLPKLISGLKLLNQADACALV
HMQENGEIILSTIGEVHLERCLEDLKLKYAKIDINVSEPIVPFRETIVPPPKLDMMNEAI
EKKKTDHVSLELWTYNRQCRFEIDAKPLPENVTKLLEKNAKLIKLLDSYCDKSIEENGEH
ESLFFDESQPNEKSISDRKQKKIKIFKNELEAAFLEAGWRGNVLDKIWSFGPRKCGLNIL
LNETDYKQKKFWEQRSTNIDPRAIYDSNIVNGFQLATLAGPLCEELMMGVCFILKKWEIF
DSSHSDYSSSQGNLSGQLMSACKDGCRRIFSLRHARLMTAMYSCSVLSNSDVLGKLYAVF
GKRQGRIISAENAHGFGGQFRVLATLPVLESFHLARELRTQTSGLASPQLVFSHWEVIEQ
DPYWVPSTEEEYLHFGEKADSDNRAKCYMDAVRRRKGLPVSSQVVIHAQKQRTLKR
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaccaatacgctcactgtttctcgttgccgcgattacgatttcgctcatagttta
aacctaacaatgcgtcgtatcactgtggagaggttcaacgatattcaagctgataccaag
cgtatcaggaatatttgtatactggcacacgtagatcatgggaagaccactctggcggat
tctctcgtcgcgagtaacggtatcatctctcacaaattggctggcaagcttcgctatttg
gacagtaggccggatgaacagatacgtgggatcacaatgaaatccagctccataacgctc
taccatatgtacaacgaaacggatcatgtgataaatttaattgactccccagggcacgta
gacttctcctccgaggtatcgacagccgtcaggctctgtgacggagctctcatcatagtc
gatgtagtggaaggcgtatgtcctcagacacgtagcgccctatctatagcgtatatcgaa
ggtctgaagcctattttagtacttaataaaatagacagattgatcacggaaatgaaattg
acatcgttggatgcttacatccgtttgacgcaagtcttggagcaggtaaatgctattacg
ggagagctgttcgcgagtgatattatggaacgcgaggacagagagaagacagttacaagc
cggtcggacaaggtgaacgaaagagatttggccgattggcaatcgatgttggaggaggta
gacgactcgaatttatatttctccccggagcaaggaaacgttttatttactagtgcaatt
gatggctggggatttagtataaaagaatttgccaagatttattcaaataaattaggattt
agtgagagagttctgtgtaaaacgttatggggagatttttacctgaacaacaaaaccaag
aggatcatgaaaggagctcaagaaaaagcgaagaaaccgctctttgtgcaacttatttta
gacaatatttggctactgtacgagactgtggtgatacgcaaagacaagaataagttgctg
gccatgactgaaaagttgaatgttaaattgtcaacgcgagacatgagacacacggacccg
agagtacaattgcaagctgtttactcgcagtggcttcccctagcacaaatttgcctggac
atggtatgcgaggagattccagcaccacataatttaactagtgaaaaaattgaacggttg
ttaagtggaaacggcgatttctcagcactacctcctgagactcaacaactcaaaaccaca
ttcctatcgtgcgatccgcggcaggcgtcggttatcgtattcgtgtcgaaaatgtttcca
gtagatagagacatgctgcctgagaacagactgaaactattgacagcggaggaattgtca
gagaaaagagagatcgtccgacagaggcatcgggagcggttgatgcaaaaacccgtagag
aatcaagaagggggtacgtgcaatactagctataataacgacgaggacgcgaagcatgaa
gaagaagaggtcactgataaatcggacagcatattggtagctttcgccaggatatactcg
gggactataaagatcggcgatgagctgtacgtcctgggaccgaaacatgaccccggcgtc
gctctggaacgcgagagagcgggcgagagaatagatccgtcgcttgtgcttaaggacctg
aaacctggaaggcatgtcacgaaagtgacgataggaaaattgtacactctcatggggaga
gagctcgtagcagtgaacgaaataccagcgggtaacgtcttcggcatcggcggcttagaa
gagcacgtactgaagaccgcgactctttccacgacgattgcctgtccctcgttcacggag
ctgacctccctcgcggttcccatcttaagggtagctctggagccgacgcatcccaacgac
ttaccgaagctcatcagcggcttgaaactgttgaaccaggcagacgcctgtgctctcgtg
cacatgcaagagaacggtgaaattatcctgagcacgatcggcgaggttcacttggagagg
tgcttggaagatcttaaattgaagtacgccaagatagatatcaatgtgtcggaaccaatt
gtgccattccgcgagactatagtgccacctccaaagctcgacatgatgaacgaagcgatt
gagaagaagaagacggatcatgtcagcctcgaactgtggacgtacaatcggcaatgtcgc
ttcgagatagacgcgaaacctcttccggagaatgtgacgaaactattggagaaaaacgca
aagctaataaaattgttagatagttattgtgataaatctatagaagagaatggagagcac
gagagtctcttttttgatgagagtcaaccgaacgaaaaatccatatccgacaggaagcag
aagaaaataaaaatattcaaaaatgaattggaggcagcttttctcgaggcgggatggagg
ggtaacgtattagataaaatatggtcattcggtccccgaaaatgcggactcaatatcctg
ttgaacgagacggattacaaacagaagaaattttgggagcagcgaagcacaaacatcgat
ccccgtgctatatacgacagcaacatagtcaatggattccagcttgctacattggctggt
cctttatgcgaagagctcatgatgggtgtctgtttcattttgaagaaatgggaaattttt
gattcttcacacagcgattacagcagcagtcagggaaatttgagtggtcaattgatgtca
gcgtgtaaagacggttgtcgacggatttttagtctacggcatgcccgattgatgactgca
atgtacagctgcagcgttttatccaattcggacgttctcggaaaattgtacgctgttttt
ggcaagagacaaggccgcatcatatccgcggaaaatgctcacggcttcggtggacaattc
agagtattggccactttaccggttctggagagcttccaccttgcgagagaactgcgtacg
caaacgtccggattggctagtccgcaactagtttttagtcattgggaggtaatcgaacag
gatccttactgggtgccatctacggaagaggaatatcttcacttcggtgaaaaggcggac
agcgataatcgagctaaatgctatatggatgctgttcgtcgaaggaaaggtcttcctgtg
agctcccaagtagttatacatgcgcaaaaacaacgcactctgaaaagataa
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