Ooceraea biroi (clonal raider ant): 105280698
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Entry
105280698 CDS
T05778
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105280698
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obo03019
]
105280698
03012 Translation factors [BR:
obo03012
]
105280698
Enzymes [BR:
obo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105280698
Messenger RNA biogenesis [BR:
obo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
105280698
Translation factors [BR:
obo03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
105280698
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
Helicase_C
HA2_N
HA2_C
AAA_22
nSTAND3
AAA_16
ResIII
AAA_19
NPHP3_N
ATPase
NACHT
PhoH
AAA_14
NB-ARC
ATPase_2
KMP11
ABC_tran
Motif
Other DBs
NCBI-GeneID:
105280698
NCBI-ProteinID:
XP_026827375
LinkDB
All DBs
Position
8:complement(11270315..11279413)
Genome browser
AA seq
1004 aa
AA seq
DB search
MAALRFLCGSYNCGSFSWYLHEKWYIRNTFSALAKMSRFGSKSASSSFVHRDREELRSST
SEGHHGQTYSRGKGRRHPPELKGKEIGMYYKNKNKQKMQNKNTLYLNLSPHLERTIQSVV
DNSQSYFNSVSNEKSTSGNKYQHIHDSQFKRKFLEIINGDIQHNLAKAMTAESKLQRNRD
VDKMLFDEYERKQSQHDYVKMLQFRMKLPAYQKNTEILRLIEDNQVVVISGETGCGKTTQ
VPQFILDEQLKAGNGSVTRIVCTQPRRISAISVAERVAAERAERLGKSVGYQIRLEKVQA
HEQGSILFCTTGVLLQIMKTDPALKSFSHVILDEIHERSTESDFILTLLKLIIPKRTDLK
VLLMSATLNAERFSKYYNECPMVHIPGFTYPVEEFYLEDVLSFTGYKFPGRQSEPTGYRK
HLKRYKELQHKRCEFVDVIQPYARELIAEGKYGKDIIDQIQNPDSEKLSLDLIEKLVRYI
CNTKGPGAILIFLPGMMDISKLNRMLIDSGCYPSHKYVIYPLHSRMPTIDQKLIFKEPPD
GIRKIIIATSIAETSITIEDVVYVINCGKTKFGKFDVDKNIQTLEPEWVSSANAKQRRGR
AGRVKSGECYHLYSRAREMTFDQYPLPEMLRTRLEEVILQIKILQLGKAKEFLAIVLDPP
DVKAIDLSLDLLRTLNALDEDEHLTPLGYHLAHLPLDPRTGKMILWASLFSCVEPIFAIA
ASLTFKDAFYCPLGREEEVNKKKLELSMNQYSDHVALAEALRRFEIEHRRANAGQFCREY
FLSFNTLKLLSEMKNQFAQYLHEMKFLDSDNPSDRNANKNSDNIALIKTIVCAGLYPNIA
VVRRVTKHGIVGWTPEDGPVRTHPSSVNNKAQVRNFPGRYLTYFTKQRSTAIFLHDTTCI
SMPTLLFAGPKISIRREKGKCAITTLNLNENIICELQTVQLIQELQRALNTLLEYKITHP
ATVSWSTFEGDLLHAIIELISQKEESFNDYGACDIDDYTDDYVD
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atggctgctctcaggtttctctgtggtagctataattgtggatcgttttcttggtatctg
catgaaaagtggtatatcaggaacacgttttccgcacttgcaaagatgtcgcgatttggt
tctaaatcagcatcgagttcctttgtacaccgtgatagagaagaactacgatcatctaca
tctgaaggacatcatggacagacatattcacgaggcaaaggacggagacatccgcctgaa
ctcaagggaaaagagataggaatgtattataaaaataaaaataagcaaaaaatgcaaaat
aaaaacacattatatcttaatttgtcgccacacttagaacgaacgattcaaagtgtcgta
gacaattcgcagagttattttaactcagtttctaatgaaaagtctacctctggtaacaaa
tatcagcatattcatgattcacaatttaaaagaaaatttttagaaattataaatggtgat
attcagcacaatcttgccaaggctatgactgcagaatcaaaattgcaacggaatcgtgat
gtagataaaatgttattcgatgaatatgaaaggaagcaatcacagcatgattatgtcaag
atgttacaatttcgaatgaagctaccggcgtatcagaaaaatacagaaatattgcgacta
attgaagataatcaagttgttgttattagtggtgaaactggttgcggtaagactacacag
gtgccacagtttatattggatgagcagttgaaagctggaaatggtagtgttacccgaatt
gtttgtacgcagcctaggaggatttcagctatatctgttgctgaacgcgtggctgcggaa
agagcggaaagactcggaaaatctgttggttatcaaatacgactcgaaaaagttcaagcg
catgaacaaggaagtatattattttgcactactggtgtattgctgcaaattatgaagact
gatccagcattaaaaagtttctctcatgtgatactggatgaaattcatgaacgttccaca
gaaagcgattttattcttacgttgttgaaattaattattccaaaaagaacagatttaaaa
gttcttttaatgagcgcaacattgaacgctgaacgcttttcgaaatattataacgaatgc
ccaatggtacatataccaggatttacttatccagtagaagaattttatttagaagatgtc
ttgtcatttacaggatataaatttcctggacggcaatcagaacccacaggttatagaaaa
cacctaaaaagatacaaagagttacaacacaaaaggtgtgaatttgttgatgtaatacaa
ccttatgctagagaacttattgctgagggaaagtacggaaaagatattattgatcaaata
caaaatcccgatagtgaaaaactttcgttggacctcattgaaaaattagttcgatatatt
tgtaatacaaaaggacctggagctatccttatatttttacctggtatgatggacatatct
aaattaaatagaatgttgatagattccggatgttatccaagccacaaatacgtcatctat
ccccttcattcgcgcatgccaacaattgatcagaaacttatatttaaagaaccacctgat
ggtattcgtaaaataattatcgcgacgtcaatcgctgagacatcaataaccatagaagat
gtagtatatgtaataaattgcgggaaaacaaagtttgggaaattcgatgttgataaaaac
atccaaactttagagcctgagtgggtgtcatcagctaatgctaaacaaagacgtggtaga
gccggcagagttaaaagcggtgagtgctatcacttgtattcaagagctcgtgaaatgacg
tttgatcagtatccattaccagaaatgttgcgaacgcgcctagaagaagtaattttgcaa
ataaaaatcctgcagttggggaaagccaaagagttccttgctattgtcctcgatccacca
gatgtaaaagccattgatctgtctctcgatttacttcgaaccctaaatgctcttgatgaa
gacgagcatttgacacctctgggttatcatttggcgcatctgccgcttgaccctagaaca
gggaaaatgattctttgggcttcactgttttcctgcgtcgagccgatattcgctatcgca
gcgagtcttacgttcaaagatgccttctattgcccgttaggaagagaggaagaggttaat
aaaaagaaattagagcttagcatgaatcaatacagtgatcacgttgctctcgcggaggcc
ctgagaagatttgagattgaacaccgaagggccaacgccggccagttctgccgggaatac
tttctttccttcaatacgctgaaacttctctcggagatgaaaaaccaatttgcgcaatac
ttgcacgagatgaagttcctggatagcgacaatccaagtgacagaaatgccaacaaaaat
tcggacaacattgcgttgataaaaactattgtttgcgcaggattatatcccaatatcgct
gtcgtaaggcgcgttacaaagcatggaattgttggttggactccggaggacggtcctgta
cgtacacatccctcaagtgtgaacaacaaagctcaagttcgcaacttccctggtcgatat
ttaacgtatttcacgaaacaacgctctaccgctatattcctgcacgataccacgtgcata
agcatgccgactttattattcgccggaccaaagatatcgatacgtcgcgagaaaggaaaa
tgtgcaatcactactttgaacttgaatgaaaatatcatttgcgaattgcaaactgtacaa
ctgatacaggagcttcaacgagccctaaatactttattggaatataaaattacgcatcca
gcgacagtttcgtggtcgacatttgagggggatttattacacgccattatcgaactaata
tcccagaaagaagagagttttaatgactacggcgcttgtgatatagatgattacacggat
gattatgttgattga
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