Ooceraea biroi (clonal raider ant): 105280699
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Entry
105280699 CDS
T05778
Name
(RefSeq) structure-specific endonuclease subunit slx1 isoform X1
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
105280699
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
obo03400
]
105280699
DNA repair and recombination proteins [BR:
obo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
105280699
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLX1_C
GIY-YIG
T5orf172
PHDvar_NSD
zf-RING-like
PHD
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
105280699
NCBI-ProteinID:
XP_011339718
LinkDB
All DBs
Position
8:11279561..11281123
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AA seq
276 aa
AA seq
DB search
MEEETEIVEHFFGVYLLYCTNPKYKGRTYIGYTVNPRRRIKQHNAGKKYGGAWKTSNRGP
WNMVLIVHGFPNSTSALRDCCFQFEWAWQHPHVSRRLKHIPKKKSSQKKFDFCLTVLSEM
LKIGPWCRLPLIVRWLDYEFSKNYYGRISPPLHMPVCYGKVSTCKTKSTQRSRTDDILSH
ELRSSMGESLIFCSLCGSSATQNNSVTCMQPKCPLIAHLICLAKVFCKDGMILPIEGTCP
TCTTSVLWGDLIKKKNGCYQYLQEANTNSSSSDSDI
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagaaactgaaatagtggagcacttcttcggagtgtatttattatattgtacg
aatccgaaatacaagggacgaacttacataggttatactgtaaatccaaggcgtagaatt
aaacaacataatgccggtaagaaatacggtggtgcttggaaaactagtaacagagggcca
tggaacatggttttgattgttcatggttttcctaatagcacttctgcattaagggactgt
tgttttcagtttgaatgggcttggcaacacccacatgttagtagacgactgaaacacatt
cccaaaaagaagtcatcccagaagaagtttgatttttgtctgacagtcctgtctgagatg
ttgaagattggtccttggtgtcgtttgcctctgatagtacgttggttggattatgaattc
tccaagaactattatggacgtatctcaccaccattacatatgcctgtatgctatggtaaa
gtcagcacttgtaagaccaagagtacgcaacgatccagaacggatgatattttgtcgcac
gagttacgttcgtctatgggagaatcactgatattttgttctctctgtggctcgagtgca
acgcaaaataattccgttacttgcatgcagccaaaatgtcctttgatcgctcatttaata
tgtttggcaaaagtattctgcaaggatggaatgattctgccgatcgagggtacatgccct
acatgtacaaccagtgtcctttggggtgaccttattaaaaaaaaaaatggttgttatcaa
tatcttcaggaggctaatactaattcttcttccagcgatagtgacatttaa
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