Ooceraea biroi (clonal raider ant): 105280735
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Entry
105280735 CDS
T05778
Name
(RefSeq) ATP-dependent helicase brm
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105280735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
obo03021
]
105280735
03036 Chromosome and associated proteins [BR:
obo03036
]
105280735
Transcription machinery [BR:
obo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
105280735
Chromosome and associated proteins [BR:
obo03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
105280735
Chromatin remodeling factors
BAF complex
105280735
PBAF complex
105280735
GBAF(ncBAF) complex
105280735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
BRK
ResIII
QLQ
HDA2-3
DEAD
NirdL-like_HTH
Motif
Other DBs
NCBI-GeneID:
105280735
NCBI-ProteinID:
XP_011339786
LinkDB
All DBs
Position
8:11590707..11614659
Genome browser
AA seq
2067 aa
AA seq
DB search
MASPSPQSSPMPPPQAPSPMGPPQQAPSPSNAQGSPMGPPQLHPHSPTQGYQGPPIPPGG
PPMSQPPQQPPPQNYPPHPQQMPPNMGPQNQGPGGPVGQVPTSQQGPGGPMVPGQMGPNG
SQSGPHMMQTGPNQMGSNGPGQIGPGGPGQMGPTGPGQMGPGGQMGPGGPGQMGGPGGPG
QMAPSHMVQGGPPGGPHMGQPGPGQMGPGSGPVPGPQGSQMVPGGPGHMTGPPSHMNASG
PPGPGHITSGGPSGHMSATGSPVTGHMNASGPPGPGHMNASGPPGPGHMNASGPPGPGGH
MNTGPPIPSHMNASGPPVSTHMNATGPGSHMGPGGPGQMPTSGPGHNMGPGGPNQMGPGG
PNQMIPSNQPQMGPGGPVGPVGPTGQIGPNGPGQMGHNGPSQMGPNGPTQMGIGGPPGQM
GMSAPGGQMGGPGNQMGPTGPGNQMGPGAPGNQMGPSGPGGQMGPGGGPVGQLGPNGLGQ
MGPGSGPGSVPMTTSSGPVIVSMGPGSGPNGPTGVGVPSGPGGQMSTGSGPGIPMGSAGP
GGNSGAQMGPGNGPGAQMNSGNGPGGQMAPGAGPGGQMGPGGGQMGHGASGPGGQMGPGS
GPGPMGPGSSPAGQIGPGGQIPSAGPGQIMQSLGAQMGPNAPSNQMGPGGPNSQMGSCGP
NSQITHANASGQMGPNGPTGQSPITQLGPGSQNQGQVPGGTGPIGSGAPVNQMSQTGSGQ
IGPAGPPTGPPGPGQENLNALQKAIDSMEEKGLQEDPRYSQLLALRARQGSGMGEKQAFN
SQQLQQLRAQIMAYRLLARNQPVPQQVALAAQGGAPPPPGLGQRPIDPSQGPATTAGPQI
PGPNVIGPAGAPRPGCQTPQQQQQQPQPGTKTNRVTSVAKPVGLDPLLILQERENRVAAR
ISLRMEQLSNLPTNMPEDLRIQAQIELRMLRVLNFQRQLRSEIIACTRKDTTLETAVNVK
AYKRTKRQGLREARATEKLEKQQKLEAERKRRQKHQEFLSSVLQHGKDFKEFHRNNIAKL
ARLNKAVLNYHANAEREQKKEQERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAFLLSQT
DEYISNLTEMVKQHKIEQKRKQVEEQKRKKKKKKLQDSENAEDGAVNDDTRVGVIEIATG
RTLIGDEAPLMSQLSAFLEAHPGWEPIESESEEESDDDDESEDKSDSKDKSMGDSEEDKV
KKTIHKAKVEDDEYKTEEQTYYSIAHTVHEVVTEQASIMVNGLLKEYQTKGLEWLVSLFN
NNLNGILADEMGLGKTIQTIALVTYLMEKKKVNGPFLIIVPLSTLSNWVLEFEKWAPSVV
VVSYKGSPAGRRAIQSQMRATKFNVLLTTYEYVIKDKGVLAKLQWKYMIIDEGHRMKNHH
CKLTQVLNTHYLAPHRLLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATT
GEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYKH
MQSKGVLLTDGSEKGKQGKGGAKALMNTIVQLRKLCNHPFMFQAIEEKYCEHVGTQGSGV
ITGPDLYRASGKFELLDRILPKLKATNHRVLLFCQMTQLMTIMEDYLSWRGFMYLRLDGT
TKAEDRGDLLKKFNDPGSEYFLFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDR
AHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERQQFLQS
ILHQDDADDEEENEVPDDETVNQMIARTEGEFEIFQKLDLERRREEAKLGPNRKSRLLEE
AELPDWLVKDDDEVERWTYEEDEDRFLGRGSRQRKEVDYTDSLTEKEWLKAIDDDGAEYE
EEEEDDKKKKKTRKRKKKGEEDDEPMPKKRRGAGALVDPKMKRAMKKLITLVVNYTDSSD
GRLLSEPFMKLPSRRELPDYYEIIKKPLTINKLSQKIEEGKYADLDELEKDFMQLCKNAQ
IYNEEASLIHEDSIVLQSVFTNARQRLEEEGNNSDGDDKDGEEGSDADSSVRMKIKLKGR
KGEGRGGRRKRVTKKYISDDDDDADDN
NT seq
6204 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtccttcgccacaatcctctcctatgccgccgccacaagctcctagtccaatg
ggtcctcctcaacaagcaccgtctccatctaatgcacagggcagtccaatgggacctcca
cagcttcatcctcatagcccaacgcaaggctaccaaggtccacctataccaccaggagga
ccacctatgtcgcagccaccgcaacaaccgccacctcaaaattacccgcctcatccacaa
caaatgccacctaatatgggtccacagaatcaaggtccaggtggaccagttggacaagta
cctacctctcagcaaggtcctggaggaccaatggtacctggtcagatgggtccaaatgga
tcacaaagtggacctcatatgatgcaaactggtcccaatcagatgggctctaacggacct
ggacagataggtcctggcggacctggacaaatgggacctactggacctggtcagatgggt
ccgggagggcagatgggaccaggtggtcctggacagatgggtggtccaggaggtcctgga
caaatggctccatctcatatggtacaaggaggtcctcctggcggacctcacatgggtcaa
cctggaccaggacaaatgggtccaggtagcgggcccgttccaggtcctcaaggctcgcaa
atggttcccgggggacccggacatatgactgggcctccaagtcatatgaatgcaagtggt
ccaccaggaccaggtcacataacttccggtggtccttctggacacatgagtgctacggga
tcaccagtaacaggacacatgaatgccagcggcccacctggacctggacatatgaacgcg
agcggccctcctggaccaggtcatatgaatgcgagcggtcctcctggaccaggtggtcat
atgaacactggtcctcctattccaagtcacatgaatgcaagtggaccacctgtatctaca
cacatgaatgctactggtcccggaagtcatatgggtcctgggggtcccggtcagatgcct
acaagtggaccgggtcacaatatgggtccgggaggtccgaatcaaatgggtcctggtggc
cctaatcagatgataccaagcaatcaaccacaaatgggacctggtggaccagtagggcca
gttggaccaacagggcagattggaccgaacggacctggtcaaatgggtcataatgggcca
tcgcagatgggtccaaatggacctacgcagatgggcataggcggtccacccggacaaatg
ggtatgagtgctccaggcggacagatgggtggaccagggaatcaaatgggacctactgga
ccaggcaatcagatgggcccaggtgcaccaggtaatcaaatgggaccttctggtccaggt
ggacaaatgggacctggaggtggtcccgtaggacagttgggtccaaatggtcttggtcaa
atgggtccgggaagtggtccaggaagcgtaccaatgactacgagtagcggacctgttatt
gtttctatgggtccgggaagtggacctaatggaccaactggagtaggtgtaccgagtggg
cctggcggacagatgagtactggcagtggcccaggcataccaatgggctcagctggtcct
ggaggtaactctggagcacaaatgggaccaggcaacggtcctggagcgcaaatgaattct
ggcaatggacctggcggtcaaatggcacccggagctggaccaggtggacaaatggggcca
ggcggtggacagatggggcacggtgctagtggaccaggaggtcaaatgggacctggaagt
ggaccaggaccgatggggccaggaagtagtcctgccggtcagataggaccaggtgggcaa
attccatctgcgggcccaggccaaattatgcaaagtttaggtgctcagatgggtccaaat
gctccgagtaatcaaatgggacccggaggaccgaatagtcaaatgggatcttgcggtcca
aatagtcaaattacccatgcgaatgcgagcggacagatgggacctaacggaccgaccggt
cagtctcctattactcagttaggtcctggtagccaaaatcaaggtcaagttcccggtggc
acaggacctataggctcaggtgcaccggtaaatcagatgagtcaaactggaagtggacag
attggtcccgccggacctcctacaggacctcccggacccggacaagagaatctgaatgcg
ctccagaaagcaattgattctatggaagaaaaaggactacaggaagatccacgttattct
cagttgttagcattaagagctcgtcaaggtagtggcatgggcgagaagcaagcctttaat
tcacagcaattgcagcagttacgagctcagattatggcgtatagattgctagcgagaaat
caaccagtacctcaacaagttgctctagctgcacagggtggagctcctcctcctccaggg
ctgggtcaacgccctatagatccgtctcaaggtcctgctacaactgctggtccacaaata
ccaggtccgaatgttattggtcccgcaggtgctcctagaccaggttgtcaaacaccacaa
caacaacagcagcaacctcaacccgggaccaagactaatagagtgacgagtgtagctaaa
cccgttggattagatccattgctaatattacaggaacgagagaacagggtcgcagctcgt
atatcacttaggatggagcaacttagcaatctacccacgaatatgcctgaagatcttcgt
atacaggctcagatcgagttgcgcatgctgagagtgctgaacttccagagacaactgaga
tcagagatcattgcgtgcacccgaaaagacacaaccttagaaactgcagtgaatgtaaaa
gcttacaaacgtacgaaacggcaaggattacgcgaagctagggctaccgaaaaattagag
aagcaacagaaattagaagcagagcgtaaacgaagacagaaacatcaagaatttctcagt
tcggtgttacaacatggcaaagatttcaaagaatttcatcgcaataatatcgccaaactg
gctagacttaacaaggcagtgcttaactatcacgcaaatgctgagcgggaacagaagaag
gaacaggaacgaatcgagaaggaacgtatgcgtcgtcttatggcagaagacgaagaggga
tacagaaaactcatagatcagaagaaagacaaacgtttagcgttcctgttgtcgcaaacc
gatgaatatatcagcaatcttacagaaatggttaagcaacacaaaatagaacaaaagagg
aagcaagttgaagagcagaagcgcaagaagaaaaagaagaagttacaagatagtgagaat
gctgaggatggcgcagtcaacgatgatactcgcgttggtgtaatagaaatagccaccggt
cgcacattaattggtgacgaggcgccattaatgagtcagttatcagcatttttggaggct
catccaggctgggaaccaatcgagtcagaaagtgaagaagaaagtgatgatgatgatgag
agcgaagataaatctgacagcaaagataaatccatgggcgattctgaagaagataaagtt
aagaaaacgatacacaaggcaaaagtggaagatgacgagtataaaacggaggaacagacg
tactacagcattgctcatactgttcacgaggtggttacggaacaagcaagcattatggtg
aatggactactaaaagaatatcaaactaagggcttggagtggttggtgtcattatttaac
aataatctgaacggtattttggccgacgagatgggcctcggtaaaacgattcagaccatc
gctctcgtaacgtatctcatggaaaagaagaaagtcaacggcccattccttattattgtt
ccgttatccacactgtcaaattgggttcttgaattcgaaaagtgggcaccgagcgttgtc
gtggtatcgtacaagggttctccagctggtagaagagcgatacaatctcaaatgcgagct
acgaagtttaacgttttattaacaacttacgaatacgttataaaggataagggtgtgtta
gctaaattacaatggaagtacatgattatcgacgagggccacaggatgaaaaatcatcac
tgcaagcttactcaagtgttaaacacgcattatttggctcctcatcgactgctgttgacc
ggcacaccgttgcaaaacaaattgccagagttgtgggctctattgaatttcttattgcca
tcaatcttcaaatcctgtagtacatttgaacagtggttcaatgctccttttgcgactact
ggtgaaaaagtggaacttaacgaggaagaaaccattttgattattcgccgtttgcacaaa
gtcttgcggcctttcctgttgcggcgcctgaagaaagaagtagaatcacaattgcccgac
aaggtggaatacattatcaagtgcgacatgtccggcctgcagaaagttctttacaaacat
atgcagagcaagggtgtactgctcaccgatgggtcggaaaagggcaagcaaggcaaaggc
ggtgccaaagctctcatgaacaccatcgtacaactgagaaagttgtgcaatcatccattc
atgttccaagctatagaagaaaagtactgcgagcacgtgggcacgcaaggttccggcgtt
atcaccgggcccgatctgtatcgtgcgtccggcaagttcgaacttctcgatcgtattctt
cccaagctgaaggctacgaatcatcgagtgttattgttctgtcaaatgactcagctaatg
acaattatggaggattacttgagttggcggggattcatgtatctgcgactggacggtaca
acaaaagcagaggacagaggggacttgttaaagaaatttaacgatcccggatcggagtat
ttcctcttcctgctgtccacgcgtgccggtggtctcggtttgaatcttcaggctgccgat
acggtcattatctttgattccgattggaatcctcatcaggacttgcaagctcaagataga
gcgcacagaatcggacagaagaacgaggtgcgcgtactacgattaatgactgttaattcc
gttgaggaacggatattagcagcggctagatataaattaaatatggatgagaaagttatc
caagctggtatgttcgatcaaaagtctacgggctccgaacggcagcagtttcttcagagc
atcttgcatcaagacgatgctgatgacgaagaagagaatgaagtgccggatgacgagact
gtgaaccaaatgattgctaggacagaaggcgagttcgagatattccagaaattagatttg
gaacggcgacgcgaggaggcgaagctgggtccaaatcgcaaatcacggctgttggaggaa
gccgagttgcctgactggttggtcaaggatgacgatgaagtggaaagatggacgtacgag
gaggacgaggacagattccttggtagaggttcgagacaacgtaaagaagtcgattacacg
gacagtttaaccgaaaaggaatggttaaaggcgattgacgatgacggcgccgagtacgag
gaggaagaggaggacgataagaagaagaaaaagacgcggaagcgaaaaaagaagggcgag
gaggatgacgaacctatgccaaagaaacgaagaggtgccggagctctggtcgatcccaaa
atgaagcgagctatgaagaaattaatcaccttggttgtcaactatacggatagcagtgac
ggccgattattgagcgaacctttcatgaagttaccctctcgaagagaactgccagactat
tatgaaattattaagaaacctttgaccattaataagttatcgcagaagatcgaggaaggc
aaatacgcggatttggatgaacttgagaaggatttcatgcaactctgtaagaatgctcaa
atttataacgaagaagcatccctcattcatgaagactcgatagtgttgcaatccgttttt
acaaatgcacgtcaacgtcttgaagaagagggaaacaattccgatggcgacgacaaagat
ggggaagagggctcagacgcagattccagtgtaagaatgaaaattaaattgaagggaagg
aagggcgagggaagaggcggtcgtagaaagagagttactaagaagtatatatcggatgat
gacgatgacgctgacgataattaa
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integrated database retrieval system