Entry |
|
Name |
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
|
KO |
K12662 | U4/U6 small nuclear ribonucleoprotein PRP4 |
|
Organism |
obo Ooceraea biroi (clonal raider ant)
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:obo00001]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105280752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:obo03041]
105280752
Spliceosome [BR:obo03041]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
105280752
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
8:11745070..11747796
|
AA seq |
523 aa
MSDDEDLVYVKKQKTVHYGSLEEAERARLAAAVETTDEEKDVAGANDVANTSISAGNVHI
SNEYMELEDEMSKDRQALLEEFERRKKARQINVSTDDSEVKKHLRQLGEPICLFGEGPAD
RRTRLRELLASVGEDAIKKKHEEEEKPSHTIEKDTETTWYHEGPESLQIARSWIAAYSLP
RAKARLEKAREDLKLPTATRTAKRQELLKKLQALSIYCSQIGDTRPISSCQFSPNSKILA
TSSWSGLCKLWSVPDCTLLRTLKGHSVQVHCIVFHPKATITEDVIGDGAGQTCVMATCGL
DGTVKLWGGGMGEEPLAEVEGHEPHRVSKIAFHPSGRFLGTCCHDASWRLWDLEQQVEVL
HQEGHARAVHCISFQCDGSVCATGGYDSFGRVWDLRTGRCIMFMEGHLKNIYGIDFSPNG
FHIATASEDNACKIWDLRKRTCVYTIPAHTDVLSDVKYQRREGQYLVTASFDYTAKIWSN
KTWQPLKMLSGHDGRIMCIDVSPDHKFIATGSYDRTFKLWAPE |
NT seq |
1572 nt +upstreamnt +downstreamnt
atgtccgacgacgaggatttggtttacgtgaagaagcagaagactgttcactatggctcg
ttggaggaagcggaacgtgcgcggcttgcggctgccgttgaaacgacggacgaggagaag
gatgtcgcaggcgcgaatgatgtcgcgaatacctccatctcggctggaaacgtacatatc
tcaaacgaatatatggagctggaggatgagatgtccaaagatcggcaggcgttactggaa
gagttcgaacgtaggaaaaaggccaggcagattaacgtttccactgatgattccgaagtg
aaaaagcacttgaggcaactgggcgaaccgatctgtctattcggagaagggcctgcagac
aggaggacaagattgagggaactgttagccagcgtgggcgaggatgctattaagaagaaa
catgaggaagaggagaagccgtctcacaccattgagaaagatacggagaccacgtggtac
cacgagggtccagagtctctgcagatcgcacgatcatggatagcagcgtattcattgccc
agagcaaaggcgcggctggaaaaggccagggaggacttgaaactaccaaccgctactcgc
acggctaagaggcaggagcttctgaagaagttgcaggccttgagcatttattgctcccag
attggggacaccaggcccatctcctcctgccagttcagtccgaattccaaaattcttgcg
acgtcctcgtggtcagggctgtgcaagctgtggtccgtacctgactgtaccttgttgcgc
actttgaaggggcactcggtacaggtgcactgtatcgtttttcatccaaaagctacgatc
actgaggacgtgataggtgacggtgcaggacagacttgcgtgatggcgacttgcggattg
gatggcactgtgaagctatggggtggtggcatgggcgaggaaccactggccgaagtggag
ggacacgagcctcacagggtctccaaaatagcctttcatccatccggacgattccttggc
acgtgctgtcacgatgcttcctggcggctgtgggacctggagcagcaggtggaagtcctc
caccaagaaggtcacgctagggctgtgcactgcatcagttttcagtgtgacggaagtgtc
tgcgcgacaggtggttacgattccttcggccgcgtatgggatctgcgtaccggtagatgc
ataatgttcatggagggtcacttgaaaaacatttacggcatcgatttttcgccgaacggc
ttccacatagccaccgcgagcgaggacaacgcgtgcaagatatgggacctgcggaagaga
acctgcgtgtacacgataccggcccacaccgacgtactgtccgacgtgaagtatcagagg
agagaggggcaatatctggttaccgcctcgttcgattacaccgccaagatatggtccaac
aaaacgtggcagccactcaagatgctgtcgggccacgacgggagaattatgtgcatcgac
gtgtcgcccgatcacaagttcatcgcgaccggttcgtacgacagaactttcaaattatgg
gcgccggaatga |