KEGG   Ooceraea biroi (clonal raider ant): 105280752
Entry
105280752         CDS       T05778                                 
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
obo  Ooceraea biroi (clonal raider ant)
Pathway
obo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:obo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105280752
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:obo03041]
    105280752
Spliceosome [BR:obo03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    105280752
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I WDR55 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd PRP4 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_EML NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_RIG_2nd Ge1_WD40 Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_HPS5 WD40_RFWD3 Beta-prop_Nup120_160 WD40_like Beta-prop_SCAP WD_LRWD1 Nbas_N
Other DBs
NCBI-GeneID: 105280752
NCBI-ProteinID: XP_011339816
LinkDB
Position
8:11745070..11747796
AA seq 523 aa
MSDDEDLVYVKKQKTVHYGSLEEAERARLAAAVETTDEEKDVAGANDVANTSISAGNVHI
SNEYMELEDEMSKDRQALLEEFERRKKARQINVSTDDSEVKKHLRQLGEPICLFGEGPAD
RRTRLRELLASVGEDAIKKKHEEEEKPSHTIEKDTETTWYHEGPESLQIARSWIAAYSLP
RAKARLEKAREDLKLPTATRTAKRQELLKKLQALSIYCSQIGDTRPISSCQFSPNSKILA
TSSWSGLCKLWSVPDCTLLRTLKGHSVQVHCIVFHPKATITEDVIGDGAGQTCVMATCGL
DGTVKLWGGGMGEEPLAEVEGHEPHRVSKIAFHPSGRFLGTCCHDASWRLWDLEQQVEVL
HQEGHARAVHCISFQCDGSVCATGGYDSFGRVWDLRTGRCIMFMEGHLKNIYGIDFSPNG
FHIATASEDNACKIWDLRKRTCVYTIPAHTDVLSDVKYQRREGQYLVTASFDYTAKIWSN
KTWQPLKMLSGHDGRIMCIDVSPDHKFIATGSYDRTFKLWAPE
NT seq 1572 nt   +upstreamnt  +downstreamnt
atgtccgacgacgaggatttggtttacgtgaagaagcagaagactgttcactatggctcg
ttggaggaagcggaacgtgcgcggcttgcggctgccgttgaaacgacggacgaggagaag
gatgtcgcaggcgcgaatgatgtcgcgaatacctccatctcggctggaaacgtacatatc
tcaaacgaatatatggagctggaggatgagatgtccaaagatcggcaggcgttactggaa
gagttcgaacgtaggaaaaaggccaggcagattaacgtttccactgatgattccgaagtg
aaaaagcacttgaggcaactgggcgaaccgatctgtctattcggagaagggcctgcagac
aggaggacaagattgagggaactgttagccagcgtgggcgaggatgctattaagaagaaa
catgaggaagaggagaagccgtctcacaccattgagaaagatacggagaccacgtggtac
cacgagggtccagagtctctgcagatcgcacgatcatggatagcagcgtattcattgccc
agagcaaaggcgcggctggaaaaggccagggaggacttgaaactaccaaccgctactcgc
acggctaagaggcaggagcttctgaagaagttgcaggccttgagcatttattgctcccag
attggggacaccaggcccatctcctcctgccagttcagtccgaattccaaaattcttgcg
acgtcctcgtggtcagggctgtgcaagctgtggtccgtacctgactgtaccttgttgcgc
actttgaaggggcactcggtacaggtgcactgtatcgtttttcatccaaaagctacgatc
actgaggacgtgataggtgacggtgcaggacagacttgcgtgatggcgacttgcggattg
gatggcactgtgaagctatggggtggtggcatgggcgaggaaccactggccgaagtggag
ggacacgagcctcacagggtctccaaaatagcctttcatccatccggacgattccttggc
acgtgctgtcacgatgcttcctggcggctgtgggacctggagcagcaggtggaagtcctc
caccaagaaggtcacgctagggctgtgcactgcatcagttttcagtgtgacggaagtgtc
tgcgcgacaggtggttacgattccttcggccgcgtatgggatctgcgtaccggtagatgc
ataatgttcatggagggtcacttgaaaaacatttacggcatcgatttttcgccgaacggc
ttccacatagccaccgcgagcgaggacaacgcgtgcaagatatgggacctgcggaagaga
acctgcgtgtacacgataccggcccacaccgacgtactgtccgacgtgaagtatcagagg
agagaggggcaatatctggttaccgcctcgttcgattacaccgccaagatatggtccaac
aaaacgtggcagccactcaagatgctgtcgggccacgacgggagaattatgtgcatcgac
gtgtcgcccgatcacaagttcatcgcgaccggttcgtacgacagaactttcaaattatgg
gcgccggaatga

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