Ooceraea biroi (clonal raider ant): 105280771
Help
Entry
105280771 CDS
T05778
Name
(RefSeq) E3 ubiquitin-protein ligase SIAH1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo04013
MAPK signaling pathway - fly
obo04120
Ubiquitin mediated proteolysis
obo04137
Mitophagy - animal
obo04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105280771
09130 Environmental Information Processing
09132 Signal transduction
04013 MAPK signaling pathway - fly
105280771
04310 Wnt signaling pathway
105280771
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
105280771
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
obo04121
]
105280771
Enzymes [BR:
obo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105280771
Ubiquitin system [BR:
obo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
105280771
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
105280771
NCBI-ProteinID:
XP_011339863
LinkDB
All DBs
Position
4:3484299..3490995
Genome browser
AA seq
279 aa
AA seq
DB search
MSQLNISSGKRGRGVASTSASTVSALSSSTDLASLFECPVCFDYVLPPILQCQSGHLVCT
NCRPKLSCCPTCRGPLGNIRNLAMEKVASNVMFPCKYSTSGCTVSLVHTEKADHEDACEF
RPYSCPCPGASCKWQGSLEQVMPHLIMSHKSITTLQGEDIVFLATDINLPGAVDWVMMQS
CFGHHFMLVLEKQEKYDGHQQFFAIVQLIGSRKQAENFAYRLELNGHRRRLTWEAMPRSI
HEGVSSAILNSDCLVFDTSIAQLFADNGNLGINVTISMA
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaattaaatatcagctctggcaagcggggcaggggggttgcgagtacttccgca
tcaaccgtgtccgcgctaagcagctctaccgatctggcgagtctctttgagtgtccagtt
tgttttgattatgtgcttccaccgatcttgcaatgccagagtgggcacctcgtttgcacg
aattgccgaccgaagctctcctgttgccctacgtgccgaggtccactgggtaatatccgc
aacttggccatggagaaggtggcgagtaacgtaatgttcccctgtaagtattccaccagc
ggctgtacagtttcgttggtacacaccgagaaggcagatcacgaagatgcgtgcgagttc
cgtccatacagctgcccctgcccgggagcgtcctgcaagtggcagggatcgctggagcag
gtgatgccgcatctcatcatgagtcacaaaagtatcacgaccctacaaggagaagacatt
gttttcttagcgactgacattaatcttccgggagctgtggattgggtgatgatgcaatcc
tgtttcggccatcactttatgctggtgctggagaagcaggagaaatacgacgggcatcag
cagttcttcgcgatcgtacagctgatcggttcgaggaaacaagcagagaatttcgcttac
agattggagttgaacgggcacaggaggcgtcttacgtgggaggcgatgccgcgttccatc
cacgagggtgtgtcgtcagcgattttaaattctgactgtcttgtatttgacacctccatt
gcgcagttgttcgccgacaatggaaacctaggaattaatgttacaatttccatggcatga
DBGET
integrated database retrieval system
